Mercurial > repos > abims-sbr > cds_search

changeset 10:3d00be2d05f3 draft

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planemo upload for repository https://github.com/abims-sbr/adaptsearch commit 7d45b8e07bf99420df9b195617515b8002b5eaf3
author abims-sbr
date Fri, 06 Jul 2018 02:52:15 -0400
parents 640ef4c06ed5
children 06a28df198b6
files scripts/S01_find_orf_on_multiple_alignment.py
diffstat 1 files changed, 1 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/scripts/S01_find_orf_on_multiple_alignment.py	Tue Jul 03 10:54:18 2018 -0400
+++ b/scripts/S01_find_orf_on_multiple_alignment.py	Fri Jul 06 02:52:15 2018 -0400
@@ -303,7 +303,7 @@
 def ReverseComplement2(seq):
     # too lazy to construct the dictionary manually, use a dict comprehension
     seq1 = 'ATCGN-TAGCN-atcgn-tagcn-'
-    seq_dict = { seq1[i]:seq1[i+6] for i in range(24) if i < 6 or 12<=i<16 }
+    seq_dict = { seq1[i]:seq1[i+6] for i in range(24) if i < 6 or 12<=i<=16 }
     return "".join([seq_dict[base] for base in reversed(seq)])
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