diff scripts/dico.py @ 3:ff98ed7849fa draft

planemo upload for repository https://github.com/abims-sbr/adaptsearch commit cf1b9c905931ca2ca25faa4844d45c908756472f

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/scripts/dico.py	Wed Jan 17 08:55:29 2018 -0500
@@ -0,0 +1,16 @@
+import string
+
+def dico(F1):    
+    dicoco = {}
+    while 1:
+        next2 = F1.readline()
+        if not next2:
+            break
+        if next2[0] == ">":
+            fasta_name_query = next2[:-1]
+            Sn = string.split(fasta_name_query, "||")
+            fasta_name_query = Sn[0]
+            next3 = F1.readline()
+            fasta_seq_query = next3[:-1]
+            dicoco[fasta_name_query]=fasta_seq_query    
+    return(dicoco)