Mercurial > repos > peterjc > seq_composition
changeset 1:d657a630158b draft
Uploaded v.0.0.1a, embed citation
| author | peterjc |
|---|---|
| date | Tue, 18 Nov 2014 09:59:51 -0500 |
| parents | 06abd5621699 |
| children | 240022d8c523 |
| files | tools/seq_composition/README.rst tools/seq_composition/seq_composition.xml |
| diffstat | 2 files changed, 9 insertions(+), 4 deletions(-) [+] |
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--- a/tools/seq_composition/README.rst Tue Aug 12 11:42:11 2014 -0400 +++ b/tools/seq_composition/README.rst Tue Nov 18 09:59:51 2014 -0500 @@ -40,11 +40,12 @@ <tool file="seq_composition/seq_composition.xml" /> -You will also need to install Biopython 1.62 or later. If you want to run the unit -tests, include this line in ``tools_conf.xml.sample`` and the sample FASTA files -under the ``test-data`` directory. Then:: +You will also need to install Biopython 1.62 or later. - ./run_functional_tests.sh -id seq_composition +If you wish to run the unit tests, also move/copy the ``test-data/`` files +under Galaxy's ``test-data/`` folder. Then:: + + ./run_tests.sh -id seq_composition That's it. @@ -56,6 +57,7 @@ Version Changes ------- ---------------------------------------------------------------------- v0.0.1 - Initial version. + - Tool definition now embeds citation information. ======= ======================================================================
--- a/tools/seq_composition/seq_composition.xml Tue Aug 12 11:42:11 2014 -0400 +++ b/tools/seq_composition/seq_composition.xml Tue Nov 18 09:59:51 2014 -0500 @@ -61,4 +61,7 @@ This tool is available to install into other Galaxy Instances via the Galaxy Tool Shed at http://toolshed.g2.bx.psu.edu/view/peterjc/seq_composition </help> + <citations> + <citation type="doi">10.1093/bioinformatics/btp163</citation> + </citations> </tool>