Mercurial > repos > peterjc > package_mira_4_9_5
changeset 3:645a9fb69d42 draft
planemo upload for repository https://github.com/peterjc/pico_galaxy/tree/master/packages/package_mira_4_9_5 commit 4fbb738ddbc87132ca11dfaaaa38aa922ac87115-dirty
| author | peterjc |
|---|---|
| date | Fri, 11 Sep 2015 11:41:20 -0400 |
| parents | 9876b6e47ec8 |
| children | 8829b2c59aa6 |
| files | tool_dependencies.xml |
| diffstat | 1 files changed, 4 insertions(+), 3 deletions(-) [+] |
line wrap: on
line diff
--- a/tool_dependencies.xml Wed Sep 02 06:42:35 2015 -0400 +++ b/tool_dependencies.xml Fri Sep 11 11:41:20 2015 -0400 @@ -26,7 +26,7 @@ <action type="shell_command">uname</action> <action type="shell_command">arch</action> <action type="shell_command">echo "If pre-compiled MIRA binaries are now available for this, please report this"</action> - <action type="shell_command">echo "via https://github.com/peterjc/pico_galaxy/issues - thank you!"</action> + <action type="shell_command">echo "via https://github.com/peterjc/galaxy_mira/issues - thank you!"</action> <action type="shell_command">false</action> <!-- The 'false' command will return an error, so Galaxy should treat this as a failed install --> </actions> @@ -34,7 +34,7 @@ <action type="set_environment"> <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR</environment_variable> </action> - <!-- Wrapper requires trailing slash on $MIRA4_9 so make sure there is one (double trailing slash is harmless) --> + <!-- Note we append a trailing slash as currently expected by the wrapper XML file --> <action type="set_environment"> <environment_variable action="set_to" name="MIRA4_9">$INSTALL_DIR/</environment_variable> </action> @@ -50,7 +50,8 @@ http://sourceforge.net/projects/mira-assembler/ The environment variable ``$MIRA4_9`` will point to the folder containing the -binaries, which is also pre-pended to the``$PATH`` variable. +binaries (with a trailing slash), and this is also pre-pended to the``$PATH`` +variable. </readme> </package> </tool_dependency>