Mercurial > repos > peterjc > ncbi_blast_plus
view ncbi_blast_plus/tool_dependencies.xml @ 22:9b8b2817f411 draft
Uploaded v0.0.20pre13, auto-installation script from Dave Bouvier
author | peterjc |
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date | Mon, 05 Aug 2013 14:29:58 -0400 |
parents | 6902315b7730 |
children | 2c70fed75e57 |
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<?xml version="1.0"?> <tool_dependency> <package name="blast+" version="2.2.26+"> <install version="1.0"> <actions> <action type="download_binary"> <url_template os="darwin">ftp://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/2.2.26/ncbi-blast-2.2.26+-universal-macosx.tar.gz</url_template> <url_template os="linux" architecture="x86_64">ftp://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/2.2.26/ncbi-blast-2.2.26+-x64-linux.tar.gz</url_template> <url_template os="linux" architecture="ia32">ftp://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/2.2.26/ncbi-blast-2.2.26+-ia32-linux.tar.gz</url_template> <url_template os="linux" architecture="i686">ftp://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/2.2.26/ncbi-blast-2.2.26+-ia32-linux.tar.gz</url_template> </action> <action type="download_by_url">ftp://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/2.2.26/ncbi-blast-2.2.26+-src.tar.gz</action> <action type="shell_command">cd c++ && ./configure --prefix=$INSTALL_DIR/ncbi-blast-2.2.26+ && make && make install</action> <action type="set_environment"> <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable> </action> </actions> </install> <readme> These links provide information for building the NCBI Blast+ package in most environments. System requirements http://blast.ncbi.nlm.nih.gov/Blast.cgi?CMD=Web&PAGE_TYPE=BlastDocs&DOC_TYPE=Download </readme> </package> </tool_dependency>