Mercurial > repos > peterjc > ncbi_blast_plus
view ncbi_blast_plus/tool_dependencies.xml @ 20:688f3fb09a6a draft
Uploaded v0.0.20 preview 11, moved to GitHub, MIT license, reST markup.
author | peterjc |
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date | Tue, 30 Jul 2013 07:33:46 -0400 |
parents | |
children | 6902315b7730 |
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<?xml version="1.0"?> <tool_dependency> <package name="blast+" version="2.2.26+"> <install version="1.0"> <actions> <action type="download_by_url">ftp://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/2.2.26/ncbi-blast-2.2.26+-src.tar.gz</action> <action type="shell_command">cd c++ && ./configure --prefix=$INSTALL_DIR && make && make install</action> <action type="set_environment"> <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable> </action> </actions> </install> <readme> Downloads and compiles BLAST+ from the NCBI, which assumes you have all the required build dependencies installed. See: http://blast.ncbi.nlm.nih.gov/Blast.cgi?CMD=Web&PAGE_TYPE=BlastDocs&DOC_TYPE=Download </readme> </package> </tool_dependency>