Mercurial > repos > jorrit > obotools
changeset 45:bb20766df19c
added tool to retrieve specific go.obo version
| author | jorrit <jhpoelen@xs4all.nl> |
|---|---|
| date | Mon, 25 Mar 2013 17:48:59 -0700 |
| parents | 315ecba2921d |
| children | 532808477800 |
| files | fetch_gene_ontology_revision.xml |
| diffstat | 1 files changed, 24 insertions(+), 0 deletions(-) [+] |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/fetch_gene_ontology_revision.xml Mon Mar 25 17:48:59 2013 -0700 @@ -0,0 +1,24 @@ +<tool id="fetch-gene-ontology-revision" name="fetch specific revision of gene ontology in obo format" version="0.0.1"> + <description>from OBO repository</description> + <command>svn -r $revision cat svn://ext.geneontology.org/trunk/ontology/go.obo > $output</command> + <inputs> + <param name="revision" type="text" size="50" value="7355" label="SVN revision" /> + </inputs> + <outputs> + <data format="obo" name="output" /> + </outputs> + + <help> +.. class:: infomark + +Fetch specific version of gene ontology in OBO format + +**More information** + +Browse http://viewvc.geneontology.org/viewvc/GO-SVN/trunk/ontology/go.obo?view=log for available revisions. + + </help> + +</tool> + +