Name Description Contact Last modified    
emboss_5 unknown unknown Tue, 31 Aug 2021 08:05:39 +0000
emboss_datatypes unknown unknown Tue, 20 Dec 2011 18:43:22 +0000
bwa_mappers unknown unknown Tue, 17 Dec 2013 14:11:26 +0000
testing_cgatools unknown unknown Thu, 27 Sep 2012 17:37:59 +0000
snpeff_with_dep unknown unknown Thu, 27 Sep 2012 18:12:35 +0000
picard unknown unknown Mon, 25 Sep 2023 08:31:14 +0000
star unknown unknown Wed, 16 Jan 2013 21:21:49 +0000
package_samtools_0_1_16 unknown unknown Tue, 24 Sep 2013 20:18:59 +0000
package_samtools_0_1_18 unknown unknown Mon, 30 Sep 2013 18:20:29 +0000
package_bwa_0_5_9 unknown unknown Wed, 09 Apr 2014 13:07:13 +0000
package_bwa_0_6_2 unknown unknown Tue, 05 Feb 2013 18:35:24 +0000
gregs_copy_of_b2g unknown unknown Fri, 17 May 2013 11:34:37 +0000
blast_datatypes unknown unknown Fri, 21 Aug 2020 12:39:02 +0000
package_x11_client_1_5_proto_7_0 unknown unknown Mon, 24 Jun 2013 20:01:53 +0000
package_emboss_5_0_0 unknown unknown Wed, 11 Dec 2013 21:22:59 +0000
bam_to_sam unknown unknown Tue, 28 Sep 2021 15:57:02 +0000
categorize_elements_satisfying_criteria unknown unknown Tue, 20 Aug 2013 13:22:17 +0000
compute_motif_frequencies_for_all_motifs unknown unknown Tue, 13 Oct 2015 16:15:07 +0000
compute_motifs_frequency unknown unknown Tue, 13 Oct 2015 16:15:23 +0000
compute_q_values unknown unknown Fri, 18 Dec 2015 23:53:41 +0000
ctd_batch unknown unknown Tue, 20 Aug 2013 13:36:33 +0000
delete_overlapping_indels unknown unknown Tue, 20 Aug 2013 13:37:51 +0000
divide_pg_snp unknown unknown Tue, 13 Oct 2015 16:17:21 +0000
package_fastx_toolkit_0_0_13 unknown unknown Tue, 24 Sep 2013 17:50:26 +0000
package_libgtextutils_0_6 unknown unknown Tue, 24 Sep 2013 17:49:19 +0000
fasta_formatter unknown unknown Thu, 10 Aug 2023 06:50:22 +0000
fasta_nucleotide_changer unknown unknown Thu, 10 Aug 2023 06:50:30 +0000
fastq_quality_filter unknown unknown Thu, 10 Aug 2023 06:50:55 +0000
fastq_quality_converter unknown unknown Thu, 10 Aug 2023 06:50:48 +0000
fastq_to_fasta unknown unknown Thu, 10 Aug 2023 06:51:04 +0000
fastx_artifacts_filter unknown unknown Thu, 10 Aug 2023 06:51:11 +0000
fastx_barcode_splitter unknown unknown Thu, 10 Aug 2023 06:51:23 +0000
fastx_clipper unknown unknown Thu, 10 Aug 2023 06:51:31 +0000
fastx_collapser unknown unknown Thu, 10 Aug 2023 06:51:47 +0000
fastx_nucleotides_distribution unknown unknown Thu, 10 Aug 2023 06:51:57 +0000
fastx_quality_statistics unknown unknown Thu, 10 Aug 2023 06:52:03 +0000
fastx_renamer unknown unknown Thu, 10 Aug 2023 06:52:11 +0000
fastx_reverse_complement unknown unknown Thu, 10 Aug 2023 06:52:18 +0000
fastx_trimmer unknown unknown Thu, 10 Aug 2023 06:52:27 +0000
hgv_fundo unknown unknown Tue, 13 Oct 2015 16:52:01 +0000
hgv_hilbertvis unknown unknown Tue, 03 Jun 2014 19:25:27 +0000
indels_3way unknown unknown Tue, 20 Aug 2013 14:59:06 +0000
microsatellite_birthdeath unknown unknown Tue, 13 Oct 2015 16:25:46 +0000
multispecies_orthologous_microsats unknown unknown Tue, 13 Oct 2015 16:26:40 +0000
mutate_snp_codon unknown unknown Tue, 20 Aug 2013 15:03:11 +0000
package_picard_1_56_0 unknown unknown Tue, 20 Aug 2013 15:04:48 +0000
pileup_interval unknown unknown Fri, 15 Jan 2021 11:38:35 +0000
pileup_parser unknown unknown Wed, 05 Oct 2016 10:30:25 +0000
sam_bitwise_flag_filter unknown unknown Tue, 20 Aug 2013 15:55:50 +0000
sam_merge unknown unknown Tue, 13 Oct 2015 16:30:21 +0000
sam_pileup unknown unknown Thu, 06 Feb 2020 12:11:12 +0000
sam_to_bam unknown unknown Sat, 27 Nov 2021 12:27:56 +0000
sam2interval unknown unknown Wed, 05 Feb 2020 11:58:34 +0000
samtools_flagstat unknown unknown Tue, 28 Sep 2021 16:02:06 +0000
samtools_mpileup unknown unknown Sun, 19 Dec 2021 15:55:15 +0000
samtools_rmdup unknown unknown Mon, 29 Jul 2019 12:40:14 +0000
samtools_slice_bam unknown unknown Tue, 28 Sep 2021 16:06:25 +0000
package_r_2_11_0 unknown unknown Wed, 30 Apr 2014 16:52:16 +0000
t_test_two_samples unknown unknown Tue, 13 Oct 2015 16:32:54 +0000
xy_plot unknown unknown Sun, 17 Dec 2017 17:37:27 +0000
package_bioc_qvalue_1_34_0 unknown unknown Fri, 18 Dec 2015 23:33:46 +0000
draw_stacked_barplots unknown unknown Tue, 03 Jun 2014 18:47:39 +0000
package_bioc_hilbertvis_1_18_0 unknown unknown Fri, 18 Dec 2015 23:33:31 +0000
split_paired_reads unknown unknown Wed, 21 Aug 2013 17:20:57 +0000
fasta_clipping_histogram unknown unknown Thu, 10 Aug 2023 06:50:14 +0000
fastq_quality_boxplot unknown unknown Thu, 10 Aug 2023 06:50:38 +0000
package_eigen_3_2_0 unknown unknown Fri, 18 Dec 2015 23:37:25 +0000
package_cufflinks_2_1_1 unknown unknown Fri, 18 Dec 2015 23:36:54 +0000
testing_from_bjorn unknown unknown Thu, 14 Nov 2013 20:58:04 +0000
varscan_version_2 unknown unknown Fri, 03 Feb 2017 13:25:53 +0000
vcftools_annotate unknown unknown Tue, 13 Oct 2015 16:59:18 +0000
package_vcftools_0_1_11 unknown unknown Fri, 18 Dec 2015 23:48:06 +0000
vcftools_slice unknown unknown Sun, 24 Nov 2013 15:48:58 +0000
vcftools_compare unknown unknown Sun, 24 Nov 2013 16:01:23 +0000
vcftools_isec unknown unknown Mon, 09 Nov 2015 17:35:37 +0000
vcftools_merge unknown unknown Mon, 09 Nov 2015 17:35:52 +0000
vcftools_subset unknown unknown Sun, 24 Nov 2013 16:43:30 +0000
samtool_filter2 unknown unknown Sun, 24 Nov 2019 18:39:46 +0000
package_libpthread_stubs_0_3 unknown unknown Thu, 28 Nov 2013 04:38:33 +0000
package_libxext_proto_7_2_1 unknown unknown Thu, 28 Nov 2013 04:36:51 +0000
package_libxproto_7_0_23 unknown unknown Thu, 28 Nov 2013 04:42:48 +0000
package_libxtrans_1_2_7 unknown unknown Thu, 28 Nov 2013 04:39:15 +0000
package_libx11_1_5_0 unknown unknown Fri, 18 Dec 2015 23:42:39 +0000
package_inputproto_2_2 unknown unknown Thu, 28 Nov 2013 04:36:00 +0000
package_libxcb_proto_1_8 unknown unknown Thu, 28 Nov 2013 04:38:00 +0000
package_xorg_macros_1_17_1 unknown unknown Thu, 28 Nov 2013 04:40:47 +0000
package_libxml2_2_9_1 unknown unknown Wed, 05 Mar 2014 13:38:46 +0000
package_libxslt_1_1_28 unknown unknown Fri, 18 Dec 2015 23:44:10 +0000
package_libxau_1_0_8 unknown unknown Wed, 04 Dec 2013 15:33:37 +0000
package_libxcb_1_9_1 unknown unknown Wed, 04 Dec 2013 17:36:28 +0000
package_kbproto_1_0_6 unknown unknown Fri, 18 Dec 2015 23:41:23 +0000
freebayes unknown unknown Sat, 07 May 2022 19:48:56 +0000
package_libpng_1_6_7 unknown unknown Thu, 06 Mar 2014 12:54:50 +0000
package_libgd_2_1_0 unknown unknown Fri, 18 Dec 2015 23:41:55 +0000
filtering_1920 unknown unknown Fri, 13 Dec 2013 17:57:54 +0000
freebayes_1920 unknown unknown Fri, 13 Dec 2013 17:58:06 +0000
package_freebayes_0_9_6_9608597d unknown unknown Mon, 16 Dec 2013 18:25:34 +0000
package_bowtie_0_12_7 unknown unknown Tue, 10 Feb 2015 20:29:57 +0000
package_readline_6_2 unknown unknown Thu, 23 Jan 2014 17:30:31 +0000
package_fastqc_0_10_1 unknown unknown Thu, 23 Jan 2014 17:30:32 +0000
package_galaxy_utils_1_0 unknown unknown Thu, 12 Nov 2015 20:01:32 +0000
package_tophat2_2_0_9 unknown unknown Fri, 18 Dec 2015 23:47:37 +0000
package_ghostscript_9_10 unknown unknown Thu, 23 Jan 2014 17:30:35 +0000
package_express_1_1_1 unknown unknown Thu, 23 Jan 2014 17:30:36 +0000
package_tophat_1_4_0 unknown unknown Fri, 18 Dec 2015 23:47:51 +0000
package_sicer_1_1 unknown unknown Fri, 18 Dec 2015 23:46:52 +0000
package_weblogo_3_3 unknown unknown Thu, 23 Jan 2014 17:30:38 +0000
package_r_2_15_0 unknown unknown Wed, 30 Apr 2014 16:52:22 +0000
package_taxonomy_1_0_0 unknown unknown Thu, 23 Jan 2014 17:30:40 +0000
package_bowtie2_2_1_0 unknown unknown Thu, 23 Jan 2014 17:30:40 +0000
package_macs_1_3_7_1 unknown unknown Thu, 23 Jan 2014 17:30:41 +0000
package_clustalw_2_1 unknown unknown Thu, 23 Jan 2014 17:30:42 +0000
package_ccat_3_0 unknown unknown Thu, 23 Jan 2014 17:30:44 +0000
bowtie2 unknown unknown Thu, 03 Nov 2022 19:37:06 +0000
find_diag_hits unknown unknown Thu, 23 Jan 2014 17:30:47 +0000
tophat unknown unknown Sat, 19 Dec 2015 00:17:22 +0000
lca_wrapper unknown unknown Thu, 23 Jan 2014 17:30:52 +0000
fastq_masker_by_quality unknown unknown Wed, 19 Feb 2020 16:56:17 +0000
fastq_paired_end_joiner unknown unknown Wed, 19 Feb 2020 16:57:25 +0000
weblogo3 unknown unknown Fri, 17 Nov 2017 14:38:19 +0000
dwt_ivc_all unknown unknown Mon, 06 Jul 2020 18:12:29 +0000
fastq_manipulation unknown unknown Wed, 19 Feb 2020 16:55:55 +0000
poisson2test unknown unknown Tue, 13 Oct 2015 16:57:23 +0000
dwt_var_perclass unknown unknown Mon, 06 Jul 2020 18:12:51 +0000
t2t_report unknown unknown Thu, 23 Jan 2014 17:31:08 +0000
gmaj unknown unknown Thu, 23 Jan 2014 17:31:10 +0000
vcf_extract unknown unknown Thu, 23 Jan 2014 17:31:12 +0000
dwt_var_perfeature unknown unknown Mon, 06 Jul 2020 18:13:13 +0000
fastq_paired_end_interlacer unknown unknown Wed, 19 Feb 2020 16:57:03 +0000
fastq_trimmer_by_quality unknown unknown Sun, 01 Mar 2020 12:23:48 +0000
dwt_cor_avb_all unknown unknown Mon, 06 Jul 2020 18:12:06 +0000
tophat2 unknown unknown Sun, 01 Jan 2017 12:12:48 +0000
ccat unknown unknown Fri, 03 Dec 2021 16:27:17 +0000
express unknown unknown Thu, 23 Jan 2014 17:31:27 +0000
fastq_paired_end_deinterlacer unknown unknown Wed, 19 Feb 2020 16:56:39 +0000
fastqtofasta unknown unknown Wed, 19 Feb 2020 17:07:53 +0000
vcf_intersect unknown unknown Thu, 23 Jan 2014 17:31:34 +0000
fastq_trimmer unknown unknown Wed, 19 Feb 2020 16:58:54 +0000
freebayes_wrapper unknown unknown Thu, 23 Jan 2014 17:31:38 +0000
tabular_to_fastq unknown unknown Wed, 19 Feb 2020 17:08:16 +0000
fastq_filter unknown unknown Wed, 19 Feb 2020 16:49:00 +0000
fastq_groomer unknown unknown Wed, 19 Feb 2020 16:55:30 +0000
vcf_annotate unknown unknown Thu, 23 Jan 2014 17:31:47 +0000
t2ps unknown unknown Tue, 13 Oct 2015 16:57:37 +0000
fastq_to_tabular unknown unknown Wed, 19 Feb 2020 16:58:31 +0000
gi2taxonomy unknown unknown Thu, 23 Jan 2014 17:31:54 +0000
sicer unknown unknown Wed, 24 Oct 2018 15:30:33 +0000
fastq_combiner unknown unknown Wed, 19 Feb 2020 15:52:45 +0000
macs unknown unknown Wed, 05 Feb 2020 15:28:57 +0000
filter_transcripts_via_tracking unknown unknown Tue, 13 Oct 2015 16:21:22 +0000
clustalw unknown unknown Sun, 02 Oct 2022 15:32:04 +0000
fastq_stats unknown unknown Wed, 19 Feb 2020 16:58:09 +0000
vcf_filter unknown unknown Thu, 23 Jan 2014 17:32:12 +0000
fastqc unknown unknown Thu, 08 Jun 2023 20:01:52 +0000
fastq_paired_end_splitter unknown unknown Wed, 09 Mar 2022 08:10:59 +0000
dwt_cor_ava_perclass unknown unknown Mon, 06 Jul 2020 18:11:43 +0000
picard1106 unknown unknown Mon, 21 Jul 2014 20:36:32 +0000
tophat_fusion_post unknown unknown Tue, 13 Oct 2015 16:33:55 +0000
lastz unknown unknown Sun, 02 Jul 2023 12:10:29 +0000
package_lastz_1_02_00 unknown unknown Fri, 21 Feb 2014 19:17:15 +0000
package_pixman_0_32_4 unknown unknown Wed, 06 Jan 2016 15:27:02 +0000
package_freetype_2_5_2 unknown unknown Mon, 17 Mar 2014 19:29:33 +0000
package_cairo_1_12_14 unknown unknown Wed, 06 Jan 2016 20:00:40 +0000
package_r_3_0_0 unknown unknown Wed, 30 Apr 2014 16:44:34 +0000
package_r_3_0_1 unknown unknown Wed, 30 Apr 2014 16:44:35 +0000
package_r_3_0_2 unknown unknown Wed, 30 Apr 2014 16:44:37 +0000
package_samtools_0_1_19 unknown unknown Mon, 10 Nov 2014 19:53:24 +0000
samtools_phase unknown unknown Tue, 28 Sep 2021 16:05:18 +0000
suite_fastx_toolkit_0_0_13 unknown unknown Fri, 06 Nov 2015 21:54:30 +0000
deprecated_data_manager unknown unknown Wed, 26 Mar 2014 19:14:50 +0000
data_manager_sam_fasta_index_builder unknown unknown Sun, 16 Apr 2023 08:28:32 +0000
deprecated_suite unknown unknown Wed, 26 Mar 2014 19:16:04 +0000
suite_samtools_0_1_18 unknown unknown Fri, 06 Nov 2015 21:55:02 +0000
suite_samtools_0_1_19 unknown unknown Fri, 06 Nov 2015 21:55:09 +0000
package_rpy_1_0_3 unknown unknown Fri, 18 Dec 2015 23:46:37 +0000
package_numpy_1_7 unknown unknown Tue, 01 Apr 2014 13:11:36 +0000
package_bx_python_0_7 unknown unknown Tue, 01 Apr 2014 19:23:47 +0000
package_galaxy_ops_1_0_0 unknown unknown Fri, 18 Dec 2015 23:39:52 +0000
package_gatk_1_4 unknown unknown Tue, 01 Apr 2014 13:11:39 +0000
package_sputnik_1_0 unknown unknown Tue, 01 Apr 2014 13:11:40 +0000
data_manager_gatk_picard_index_builder unknown unknown Sun, 16 Apr 2023 08:27:07 +0000
analyze_covariates unknown unknown Wed, 02 Apr 2014 20:03:58 +0000
indel_realigner unknown unknown Tue, 01 Apr 2014 13:11:45 +0000
variant_apply_recalibration unknown unknown Tue, 01 Apr 2014 13:11:48 +0000
print_reads unknown unknown Tue, 13 Oct 2015 16:46:26 +0000
tables_arithmetic_operations unknown unknown Thu, 22 Jun 2017 22:52:09 +0000
weightedaverage unknown unknown Thu, 03 Apr 2014 13:34:00 +0000
variant_annotator unknown unknown Tue, 01 Apr 2014 13:11:57 +0000
substitution_rates unknown unknown Tue, 29 Sep 2015 15:08:38 +0000
unified_genotyper unknown unknown Tue, 01 Apr 2014 13:12:01 +0000
variant_recalibrator unknown unknown Tue, 01 Apr 2014 13:12:05 +0000
variant_eval unknown unknown Tue, 01 Apr 2014 13:12:07 +0000
realigner_target_creator unknown unknown Fri, 04 Apr 2014 14:27:24 +0000
table_recalibration unknown unknown Mon, 14 Apr 2014 12:46:59 +0000
variant_select unknown unknown Tue, 13 Oct 2015 16:48:40 +0000
variants_validate unknown unknown Tue, 01 Apr 2014 13:12:17 +0000
windowsplitter unknown unknown Wed, 03 Jun 2020 13:44:45 +0000
variant_filtration unknown unknown Tue, 01 Apr 2014 13:12:22 +0000
best_regression_subsets unknown unknown Thu, 10 Apr 2014 17:50:32 +0000
variant_combine unknown unknown Tue, 01 Apr 2014 13:12:26 +0000
microsats_alignment_level unknown unknown Tue, 13 Oct 2015 16:26:00 +0000
substitutions unknown unknown Mon, 06 Jul 2020 18:13:37 +0000
depth_of_coverage unknown unknown Tue, 01 Apr 2014 13:12:33 +0000
count_covariates unknown unknown Tue, 01 Apr 2014 13:12:36 +0000
get_flanks unknown unknown Thu, 22 Jun 2017 22:39:52 +0000
maf_cpg_filter unknown unknown Tue, 13 Oct 2015 16:24:49 +0000
logistic_regression_vif unknown unknown Tue, 01 Apr 2014 13:12:43 +0000
featurecounter unknown unknown Tue, 01 Apr 2014 13:12:47 +0000
subtract_query unknown unknown Thu, 22 Jun 2017 22:51:44 +0000
complement unknown unknown Thu, 22 Jun 2017 22:38:23 +0000
cluster unknown unknown Thu, 22 Jun 2017 22:38:08 +0000
getindelrates_3way unknown unknown Tue, 01 Apr 2014 13:12:55 +0000
getindels_2way unknown unknown Thu, 10 Apr 2014 17:50:40 +0000
linear_regression unknown unknown Tue, 01 Apr 2014 13:12:59 +0000
partialr_square unknown unknown Tue, 01 Apr 2014 13:13:02 +0000
microsats_mutability unknown unknown Sat, 19 Dec 2015 00:08:34 +0000
rcve unknown unknown Tue, 01 Apr 2014 13:13:06 +0000
quality_filter unknown unknown Tue, 13 Oct 2015 16:28:59 +0000
subtract unknown unknown Thu, 22 Jun 2017 22:51:24 +0000
flanking_features unknown unknown Thu, 22 Jun 2017 22:39:31 +0000
intersect unknown unknown Thu, 22 Jun 2017 22:50:20 +0000
basecoverage unknown unknown Mon, 13 Jun 2022 16:26:51 +0000
coverage unknown unknown Thu, 22 Jun 2017 22:39:05 +0000
merge unknown unknown Thu, 22 Jun 2017 22:51:08 +0000
concat unknown unknown Mon, 25 Jun 2018 23:47:54 +0000
join unknown unknown Thu, 22 Jun 2017 22:50:39 +0000
suite_gatk_1_4 unknown unknown Fri, 06 Nov 2015 21:54:40 +0000
suite_gops_1_0 unknown unknown Fri, 06 Nov 2015 21:54:47 +0000
package_ucsc_viz unknown unknown Mon, 12 May 2014 20:52:27 +0000
package_blast_plus_2_2_26 unknown unknown Mon, 19 May 2014 14:59:21 +0000
package_rmap_2_05 unknown unknown Fri, 18 Dec 2015 23:46:22 +0000
package_cran_kernlab_0_1_4 unknown unknown Mon, 19 May 2014 14:59:23 +0000
package_fontconfig_2_11_1 unknown unknown Wed, 04 Jun 2014 14:13:58 +0000
package_cran_yacca_1_0 unknown unknown Mon, 19 May 2014 14:59:25 +0000
fasta_filter_by_length unknown unknown Sun, 01 Mar 2020 12:22:58 +0000
rmap unknown unknown Tue, 13 Oct 2015 16:29:28 +0000
convert_solid_color2nuc unknown unknown Mon, 19 May 2014 14:59:31 +0000
megablast_xml_parser unknown unknown Wed, 09 Sep 2020 10:27:20 +0000
fastqsolexa_to_fasta_qual unknown unknown Mon, 19 May 2014 14:59:35 +0000
fasta_concatenate_by_species unknown unknown Mon, 02 Mar 2020 11:46:08 +0000
blat_mapping unknown unknown Mon, 19 May 2014 14:59:40 +0000
annotation_profiler unknown unknown Mon, 19 May 2014 14:59:42 +0000
megablast_wrapper unknown unknown Tue, 13 Oct 2015 16:25:15 +0000
mapping_to_ucsc unknown unknown Tue, 13 Oct 2015 16:25:02 +0000
blat_coverage_report unknown unknown Mon, 19 May 2014 14:59:50 +0000
tabular_to_fasta unknown unknown Wed, 05 Feb 2020 15:51:26 +0000
fasta_compute_length unknown unknown Mon, 02 Mar 2020 11:45:47 +0000
short_reads_trim_seq unknown unknown Tue, 13 Oct 2015 16:31:41 +0000
rmapq unknown unknown Tue, 13 Oct 2015 16:29:41 +0000
fasta_to_tabular unknown unknown Mon, 02 Mar 2020 11:46:30 +0000
kernel_principal_component_analysis unknown unknown Tue, 13 Oct 2015 16:23:23 +0000
short_reads_figure_high_quality_length unknown unknown Tue, 13 Oct 2015 16:31:14 +0000
principal_component_analysis unknown unknown Mon, 19 May 2014 15:00:07 +0000
canonical_correlation_analysis unknown unknown Mon, 19 May 2014 15:00:09 +0000
kernel_canonical_correlation_analysis unknown unknown Tue, 13 Oct 2015 16:23:10 +0000
short_reads_figure_score unknown unknown Mon, 19 May 2014 15:00:13 +0000
package_mine_1_0_1 unknown unknown Mon, 28 Jul 2014 15:30:04 +0000
correlation unknown unknown Mon, 28 Jul 2014 15:30:05 +0000
vcf2pgsnp unknown unknown Mon, 28 Jul 2014 15:30:07 +0000
pgsnp2gd_snp unknown unknown Tue, 13 Oct 2015 16:27:32 +0000
ucsc_custom_track unknown unknown Mon, 28 Feb 2022 20:05:39 +0000
dna_filtering unknown unknown Tue, 13 Oct 2015 16:17:35 +0000
mine unknown unknown Tue, 13 Oct 2015 16:26:26 +0000
pearson_correlation unknown unknown Tue, 13 Oct 2015 16:27:19 +0000
generate_pc_lda_matrix unknown unknown Mon, 28 Jul 2014 15:30:18 +0000
count_gff_features unknown unknown Tue, 06 Jun 2017 22:37:39 +0000
column_maker unknown unknown Thu, 28 Jul 2022 15:27:54 +0000
scatterplot unknown unknown Sat, 03 Jun 2017 13:29:17 +0000
plot_from_lda unknown unknown Tue, 13 Oct 2015 16:28:33 +0000
histogram unknown unknown Mon, 27 Jul 2020 07:25:28 +0000
lda_analysis unknown unknown Tue, 13 Oct 2015 16:23:54 +0000
snpfreq unknown unknown Tue, 13 Oct 2015 16:52:33 +0000
samtools_sort unknown unknown Tue, 28 Sep 2021 16:07:07 +0000
samtools_calmd unknown unknown Sat, 27 Nov 2021 12:28:24 +0000
samtools_reheader unknown unknown Tue, 28 Sep 2021 16:05:50 +0000
samtools_stats unknown unknown Wed, 22 Jun 2022 07:47:48 +0000
samtools_split unknown unknown Mon, 15 Aug 2022 09:12:10 +0000
samtools_bedcov unknown unknown Tue, 28 Sep 2021 15:58:49 +0000
package_fastqc_0_11_2 unknown unknown Tue, 11 Nov 2014 17:16:18 +0000
package_cufflinks_2_2_1 unknown unknown Fri, 18 Dec 2015 23:37:09 +0000
cufflinks unknown unknown Tue, 16 Jun 2020 16:57:48 +0000
cuffcompare unknown unknown Tue, 16 Jun 2020 16:56:55 +0000
cuffdiff unknown unknown Sat, 27 Nov 2021 09:56:54 +0000
cuffmerge unknown unknown Fri, 20 Aug 2021 16:39:54 +0000
cuffnorm unknown unknown Mon, 06 Jul 2020 18:19:36 +0000
cuffquant unknown unknown Tue, 16 Jun 2020 16:59:04 +0000
package_bowtie_2_2_4 unknown unknown Fri, 18 Dec 2015 23:34:44 +0000
package_bamtools_2_3_0_2d7685d2ae unknown unknown Thu, 16 Jul 2015 09:50:45 +0000
bamtools unknown unknown Wed, 18 Jan 2017 16:46:46 +0000
bamtools_split unknown unknown Wed, 18 Jan 2017 16:44:34 +0000
bamtools_filter unknown unknown Thu, 20 Feb 2020 22:22:59 +0000
package_freebayes_0_9_14_8a407cf5f4 unknown unknown Thu, 11 Dec 2014 19:13:02 +0000
package_freebayes_0_9_18_0059bdf unknown unknown Fri, 18 Dec 2015 23:39:06 +0000
bamleftalign unknown unknown Thu, 11 Dec 2014 23:36:26 +0000
ncbi_blast_plus unknown unknown Mon, 19 Dec 2022 09:36:39 +0000
data_manager_fetch_genome_all_fasta unknown unknown Tue, 13 Oct 2015 14:18:14 +0000
data_manager_fetch_genome_dbkeys_all_fasta unknown unknown Thu, 05 Dec 2019 22:10:12 +0000
data_manager_bwa_mem_index_builder unknown unknown Sun, 16 Apr 2023 08:27:00 +0000
package_bwa_0_7_10_039ea20639 unknown unknown Wed, 18 Mar 2015 18:43:31 +0000
data_manager_bowtie2_index_builder unknown unknown Sun, 16 Apr 2023 08:25:58 +0000
data_manager_picard_index_builder unknown unknown Sun, 16 Apr 2023 08:28:16 +0000
cummerbund_to_tabular unknown unknown Thu, 02 Apr 2015 20:13:37 +0000
data_manager_build_kraken_database unknown unknown Sun, 16 Apr 2023 08:26:51 +0000
kraken unknown unknown Tue, 03 Dec 2019 18:29:41 +0000
kraken_filter unknown unknown Tue, 03 Dec 2019 18:30:10 +0000
kraken_report unknown unknown Tue, 03 Dec 2019 18:30:41 +0000
kraken_translate unknown unknown Sat, 27 Nov 2021 10:11:18 +0000
suite_kraken_0_10_5 unknown unknown Fri, 06 Nov 2015 21:54:54 +0000
test_repository unknown unknown Fri, 01 Dec 2017 15:24:44 +0000
package_picard_1_136 unknown unknown Thu, 16 Jul 2015 19:28:53 +0000
package_gb_taxonomy_8d245994d7 unknown unknown Fri, 18 Dec 2015 23:40:37 +0000
vegan_rarefaction unknown unknown Wed, 26 Aug 2015 21:19:25 +0000
vegan_diversity unknown unknown Wed, 26 Aug 2015 21:11:15 +0000
data_manager_twobit_builder unknown unknown Sun, 16 Apr 2023 08:28:51 +0000
data_manager_bwa_index_builder unknown unknown Fri, 06 Nov 2015 19:15:00 +0000
data_manager_fetch_ncbi_taxonomy unknown unknown Fri, 19 Mar 2021 21:43:14 +0000
data_manager_hisat_index_builder unknown unknown Fri, 06 Nov 2015 19:17:24 +0000
data_manager_rsync_g2 unknown unknown Thu, 28 Nov 2019 20:31:09 +0000
all_cufflinks_tool_suite unknown unknown Mon, 09 Nov 2015 15:48:20 +0000
all_vcftools unknown unknown Mon, 09 Nov 2015 15:48:45 +0000
suite_bamtools_2_3_0 unknown unknown Mon, 09 Nov 2015 15:49:01 +0000
suite_cufflinks_2_2_1 unknown unknown Mon, 09 Nov 2015 19:35:19 +0000
suite_samtools_1_2 unknown unknown Mon, 09 Nov 2015 19:38:09 +0000
freebayes_0_9_14_8a407cf5f4 unknown unknown Mon, 09 Nov 2015 15:59:42 +0000
package_freebayes_0_9_20_b040236 unknown unknown Mon, 09 Nov 2015 16:00:11 +0000
package_picard_1_126_0 unknown unknown Mon, 09 Nov 2015 16:08:50 +0000
package_velvet_1_2_10 unknown unknown Mon, 09 Nov 2015 16:13:59 +0000
add_value unknown unknown Fri, 29 Sep 2023 15:06:25 +0000
bowtie_color_wrappers unknown unknown Mon, 09 Nov 2015 16:17:57 +0000
bowtie_wrappers unknown unknown Tue, 16 May 2017 00:57:12 +0000
bwa unknown unknown Fri, 19 Aug 2022 18:51:11 +0000
cd_hit_dup unknown unknown Fri, 18 Dec 2015 23:52:07 +0000
change_case unknown unknown Mon, 09 Nov 2015 16:22:13 +0000
condense_characters unknown unknown Mon, 09 Nov 2015 16:24:51 +0000
convert_characters unknown unknown Mon, 06 Jul 2020 18:10:56 +0000
cummerbund unknown unknown Mon, 06 Jul 2020 18:11:20 +0000
cut_columns unknown unknown Fri, 05 Aug 2016 20:37:57 +0000
dgidb_annotator unknown unknown Mon, 09 Nov 2015 16:29:28 +0000
hisat unknown unknown Mon, 09 Nov 2015 16:39:20 +0000
lastz_paired_reads unknown unknown Mon, 09 Nov 2015 16:41:55 +0000
merge_cols unknown unknown Thu, 16 Jul 2020 08:36:21 +0000
remove_beginning unknown unknown Mon, 09 Nov 2015 16:51:52 +0000
show_beginning unknown unknown Mon, 09 Nov 2015 16:56:04 +0000
show_tail unknown unknown Mon, 09 Nov 2015 16:56:33 +0000
table_annovar unknown unknown Mon, 09 Nov 2015 16:58:50 +0000
trimmer unknown unknown Mon, 09 Nov 2015 17:00:48 +0000
velvet unknown unknown Sun, 24 Jan 2021 15:39:45 +0000
gffread unknown unknown Sat, 25 Sep 2021 15:38:01 +0000
samtools_idxstats unknown unknown Tue, 28 Sep 2021 16:02:40 +0000
kraken2tax unknown unknown Fri, 29 Sep 2023 14:38:19 +0000
vcf2tsv unknown unknown Thu, 23 Jan 2020 12:51:57 +0000
vcfaddinfo unknown unknown Thu, 23 Jan 2020 12:52:18 +0000
vcfallelicprimitives unknown unknown Thu, 23 Jan 2020 12:52:39 +0000
vcfannotate unknown unknown Thu, 23 Jan 2020 12:53:02 +0000
vcfannotategenotypes unknown unknown Thu, 23 Jan 2020 12:53:24 +0000
vcfbedintersect unknown unknown Thu, 23 Jan 2020 12:53:46 +0000
vcfbreakcreatemulti unknown unknown Thu, 23 Jan 2020 12:54:08 +0000
vcfcheck unknown unknown Tue, 23 Nov 2021 11:19:34 +0000
vcfcombine unknown unknown Thu, 23 Jan 2020 12:54:52 +0000
vcfcommonsamples unknown unknown Thu, 23 Jan 2020 12:55:14 +0000
vcfdistance unknown unknown Thu, 23 Jan 2020 12:55:35 +0000
vcffilter unknown unknown Thu, 23 Jan 2020 12:55:57 +0000
vcffixup unknown unknown Thu, 23 Jan 2020 12:56:19 +0000
vcfflatten unknown unknown Thu, 23 Jan 2020 12:56:41 +0000
vcfgeno2haplo unknown unknown Thu, 23 Jan 2020 12:57:04 +0000
vcfgenotypes unknown unknown Thu, 23 Jan 2020 12:57:26 +0000
vcfhethom unknown unknown Thu, 23 Jan 2020 12:57:49 +0000
vcfleftalign unknown unknown Thu, 23 Jan 2020 12:58:13 +0000
vcfprimers unknown unknown Thu, 23 Jan 2020 12:58:37 +0000
vcfrandomsample unknown unknown Thu, 23 Jan 2020 12:58:59 +0000
vcfselectsamples unknown unknown Thu, 23 Jan 2020 12:59:22 +0000
vcfsort unknown unknown Fri, 03 Sep 2021 21:14:18 +0000
vcfvcfintersect unknown unknown Thu, 23 Jan 2020 13:00:07 +0000
suite_vcflib_1_0_0_rc1 unknown unknown Thu, 29 Sep 2016 17:13:06 +0000
vcftools_consensus unknown unknown Fri, 25 Nov 2016 12:30:06 +0000