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Repository jbrowsearchivecreator
Name: jbrowsearchivecreator
Owner: yating-l
Synopsis: A tool to create a JBrowse track hub
Development repository: https://github.com/goeckslab/jbrowse-archive-creator.git
Link to this repository: https://testtoolshed.g2.bx.psu.edu/view/yating-l/jbrowsearchivecreator/804e7217f27c
Clone this repository: hg clone https://testtoolshed.g2.bx.psu.edu/repos/yating-l/jbrowsearchivecreator
Type: unrestricted
Revision: 50:804e7217f27c
This revision can be installed: True
Times cloned / installed: 240
Dependencies of this repository

Repository dependencies - installation of these additional repositories is required
Repository package_ncurses_5_9 revision ad27910a950c owned by iuc (prior install required)
Repository package_zlib_1_2_8 revision 3348f1acee2a owned by iuc (prior install required)
Repository package_atlas_3_10 revision 35d6b30ef137 owned by iuc (prior install required)
Repository package_python_2_7 revision a03693de8e0c owned by iuc (prior install required)
Repository package_zlib_1_2_8 revision 3348f1acee2a owned by iuc (prior install required)
Repository package_readline_6_3 revision de22495ddf2b owned by iuc (prior install required)
Repository package_bzlib_1_0 revision 29f79feefc77 owned by iuc (prior install required)
Repository package_xz_5_0_5 revision c9d30f1de10a owned by iuc (prior install required)
Repository package_sqlite_3_8_3 revision 9ba893c2353f owned by iuc (prior install required)
Repository package_gdbm_1_11 revision 77ea468f199e owned by iuc (prior install required)
Repository package_ncurses_6_0 revision 15e2190c87ca owned by iuc (prior install required)
Repository package_ncurses_6_0 revision 15e2190c87ca owned by iuc (prior install required)
Repository package_libtool_2_4 revision 5ccfb33b5622 owned by iuc (prior install required)
Repository package_tabix_0_2_6 revision 54f8b9bf9b6c owned by iuc
Repository package_ucsc_hac_340 revision c6311d9e2443 owned by yating-l

Tool dependencies - repository tools require handling of these dependencies
Name Version Type
biopython 1.68 package
gff3sort 1.0 package
jbrowse_tools 1.13.1 package
numpy 1.9 package
samtools 1.2 package
tabix 0.2.6 package
ucsc_hac 340 package

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
This Galaxy tool is used to prepare your files to be ready for displaying on JBrowse with Apollo plugin 2.3.2 16.01

Categories
Visualization - Tools for visualizing data