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Repository package_tabix_0_2_6

Name: package_tabix_0_2_6

Owner: iuc

Synopsis: Tabix: Generic indexer for TAB-delimited genome position files + bgzip

Detailed description:

Tabix indexes a TAB-delimited genome position file in.tab.bgz and
creates an index file in.tab.bgz.tbi when region is absent from the command-line.
The input data file must be position sorted and compressed by bgzip which has a
gzip(1) like interface. After indexing,

tabix is able to quickly retrieve data lines overlapping regions specified in the
format "chr:beginPos-endPos". Fast data retrieval also works over network if URI
is given as a file name and in this case the index file will be downloaded if it
is not present locally.

http://samtools.sourceforge.net/tabix.shtml

Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_tabix_0_2_6

Link to this repository: https://testtoolshed.g2.bx.psu.edu/view/iuc/package_tabix_0_2_6/54f8b9bf9b6c

Clone this repository: hg clone https://testtoolshed.g2.bx.psu.edu/repos/iuc/package_tabix_0_2_6

Type: tool_dependency_definition

Revision: 1:54f8b9bf9b6c

This revision can be installed: True

Times cloned / installed: 201