Repository 'edger_test'
hg clone https://testtoolshed.g2.bx.psu.edu/repos/fubar/edger_test

Changeset 22:ca67d0e707ba (2013-06-12)
Previous changeset 21:1a0934f5eb95 (2013-06-12) Next changeset 23:51b041c8470c (2013-06-12)
Commit message:
Uploaded
modified:
rgedgeR/rgedgeRpaired.xml
rgedgeR/tool_dependencies.xml
b
diff -r 1a0934f5eb95 -r ca67d0e707ba rgedgeR/rgedgeRpaired.xml
--- a/rgedgeR/rgedgeRpaired.xml Wed Jun 12 09:10:26 2013 -0400
+++ b/rgedgeR/rgedgeRpaired.xml Wed Jun 12 09:13:07 2013 -0400
b
@@ -1,8 +1,8 @@
 <tool id="rgedgeRpaired" name="edgeR" version="0.18">
   <description>1 or 2 level models for count data</description>
   <requirements>
-      <requirement type="package" version="3.0.1">R3</requirement>
-      <requirement type="package" version="2.12">package_BioCBasics</requirement>
+      <requirement type="package" version="3.0.1">r3</requirement>
+      <requirement type="package" version="2.12">package_biocbasics</requirement>
   </requirements>
   
   <command interpreter="python">
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diff -r 1a0934f5eb95 -r ca67d0e707ba rgedgeR/tool_dependencies.xml
--- a/rgedgeR/tool_dependencies.xml Wed Jun 12 09:10:26 2013 -0400
+++ b/rgedgeR/tool_dependencies.xml Wed Jun 12 09:13:07 2013 -0400
b
@@ -1,13 +1,13 @@
 <?xml version="1.0"?>
 <tool_dependency>
-    <package name="R3" version="3.0.1">
+    <package name="r3" version="3.0.1">
         <repository name="package_R3" owner="fubar" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu/" />
     </package>
-    <package name="package_BioCBasics" version="2.12">
+    <package name="package_biocbasics" version="2.12">
         <install version="1.0"> 
             <actions>
                 <action type="set_environment_for_install">
-                      <package name="R3" toolshed="http://testtoolshed.g2.bx.psu.edu" version="3.0.1">
+                      <package name="r3" toolshed="http://testtoolshed.g2.bx.psu.edu" version="3.0.1">
                             <repository name="package_R3" owner="fubar" toolshed="http://testtoolshed.g2.bx.psu.edu/" />
                         </package>