| Previous changeset 11:fc6f5ca8aef3 (2015-12-22) |
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Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_numpy_1_9 commit bbfd77c34b609b86ef3a24525dae1127d8b3d99b |
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modified:
tool_dependencies.xml |
| b |
| diff -r fc6f5ca8aef3 -r 1e2b7e63dec2 tool_dependencies.xml --- a/tool_dependencies.xml Tue Dec 22 19:25:43 2015 -0500 +++ b/tool_dependencies.xml Mon May 02 16:11:16 2016 -0400 |
| b |
| @@ -1,7 +1,7 @@ <?xml version="1.0"?> <tool_dependency> <package name="atlas" version="3.10.2"> - <repository changeset_revision="86b7c19454fa" name="package_atlas_3_10" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> + <repository changeset_revision="c47756a8136e" name="package_atlas_3_10" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> </package> <package name="python" version="2.7"> <repository changeset_revision="409e51c1c555" name="package_python_2_7" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> @@ -9,16 +9,17 @@ <package name="numpy" version="1.9"> <install version="1.0"> <actions> + <action sha256sum="9753003ab7c489968eb260e5460556fd7d533a8e11a9d5326e0995bd1aa21318" type="download_by_url">https://depot.galaxyproject.org/software/numpy/numpy_1.9p1_src_all.tar.gz</action> + <action type="make_directory">$INSTALL_DIR/lib/python</action> <action type="set_environment_for_install"> - <repository changeset_revision="86b7c19454fa" name="package_atlas_3_10" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> + <repository changeset_revision="c47756a8136e" name="package_atlas_3_10" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> <package name="atlas" version="3.10.2" /> </repository> </action> - <action type="setup_python_environment"> - <repository changeset_revision="409e51c1c555" name="package_python_2_7" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> - <package name="python" version="2.7" /> - </repository> - <package md5sum="78842b73560ec378142665e712ae4ad9">https://pypi.python.org/packages/source/n/numpy/numpy-1.9.1.tar.gz</package> + <action type="shell_command"> + export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python && + export ATLAS=$ATLAS_ROOT_PATH && + python setup.py install --install-lib $INSTALL_DIR/lib/python --install-scripts $INSTALL_DIR/bin </action> <action type="set_environment"> <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable> |