| Previous changeset 11:5ccb4e31510a (2017-02-01) Next changeset 13:64cc41c3456d (2017-02-09) |
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Commit message:
planemo upload for repository https://github.com/peterjc/pico_galaxy/tree/master/tools/seq_primer_clip commit 7a746d55f0e8456992ee11c49a507285f9f39383-dirty |
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modified:
tools/seq_primer_clip/seq_primer_clip.py |
| b |
| diff -r 5ccb4e31510a -r 86cfa8eebb73 tools/seq_primer_clip/seq_primer_clip.py --- a/tools/seq_primer_clip/seq_primer_clip.py Wed Feb 01 13:18:48 2017 -0500 +++ b/tools/seq_primer_clip/seq_primer_clip.py Fri Feb 03 12:55:33 2017 -0500 |
| [ |
| @@ -147,8 +147,8 @@ # We'll use a set to remove any duplicate patterns # if letter not in "NX": pattern = seq[:i] + "N" + seq[i + 1:] - assert len(pattern) == len(seq), "Len %s is %i, len %s is %i" \ - % (pattern, len(pattern), seq, len(seq)) + assert len(pattern) == len(seq), ("Len %s is %i, len %s is %i" + % (pattern, len(pattern), seq, len(seq))) yield make_reg_ex(pattern) if mm >= 2: for i, letter in enumerate(seq): @@ -158,8 +158,8 @@ # We'll use a set to remove any duplicate patterns # if letter not in "NX": pattern = seq[:i] + "N" + seq[i + 1:i + 1 + k] + "N" + seq[i + k + 2:] - assert len(pattern) == len(seq), "Len %s is %i, len %s is %i" \ - % (pattern, len(pattern), seq, len(seq)) + assert len(pattern) == len(seq), ("Len %s is %i, len %s is %i" + % (pattern, len(pattern), seq, len(seq))) yield make_reg_ex(pattern) |