| Previous changeset 3:c8e9fda07f11 (2019-02-27) Next changeset 5:2eb7850c7434 (2019-02-27) |
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Commit message:
planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_kraken2_database/ commit 9b4d704c147761201fa9f1450fcf5ba6871104d8-dirty |
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modified:
data_manager/kraken2_standard_database_builder.xml |
| b |
| diff -r c8e9fda07f11 -r 9f918cce82b2 data_manager/kraken2_standard_database_builder.xml --- a/data_manager/kraken2_standard_database_builder.xml Wed Feb 27 21:19:04 2019 -0500 +++ b/data_manager/kraken2_standard_database_builder.xml Wed Feb 27 21:21:30 2019 -0500 |
| b |
| @@ -11,12 +11,12 @@ mkdir kraken2_database && cd kraken2_database && kraken2-build \ --standard \ - --db ${KRAKEN2_DB_NAME} \ + --db $KRAKEN2_DB_NAME \ --kmer-len ${kmer_len} \ --minimizer-len ${minimizer_len} \ --minimizer-spaces ${minimizer_spaces} && cd .. && - python '$__tool_directory__/make_json.py' --db ${KRAKEN2_DB_NAME} --out '${out_file}' + python '$__tool_directory__/make_json.py' --db $KRAKEN2_DB_NAME --out '${out_file}' ]]> </command> <inputs> |