| Previous changeset 34:8d8ebf8367c8 (2019-05-01) Next changeset 36:2190442bf6db (2019-05-01) |
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Commit message:
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 5629d9d7d9836d32b1e501277e213ef213de3e76-dirty |
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modified:
data_manager/kraken2_build_database.xml |
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| diff -r 8d8ebf8367c8 -r 40b2c0a4abd5 data_manager/kraken2_build_database.xml --- a/data_manager/kraken2_build_database.xml Wed May 01 16:46:36 2019 -0400 +++ b/data_manager/kraken2_build_database.xml Wed May 01 17:31:07 2019 -0400 |
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| @@ -16,10 +16,14 @@ <![CDATA[ python '$__tool_directory__/kraken2_build_database.py' '${out_file}' - --threads \${GALAXY_SLOTS:-1} - --kmer-len ${kmer_len} - --minimizer-len ${minimizer_len} - --minimizer-spaces ${minimizer_spaces} + #if $database_type.database_type == "minikraken" + --minikraken2-version ${minikraken2_version} + #else if $database_type.database_type == "standard" + --threads \${GALAXY_SLOTS:-1} + --kmer-len ${kmer_len} + --minimizer-len ${minimizer_len} + --minimizer-spaces ${minimizer_spaces} + #end if ]]> </command> <inputs> |