| Previous changeset 22:8e8de26a1383 (2019-03-05) Next changeset 24:7233538ef3cb (2019-03-05) |
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Commit message:
planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_kraken2_database/ commit 70494d589aa1990618ebc7a895e91477d41c3203-dirty |
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modified:
data_manager/kraken2_build_special.py |
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| diff -r 8e8de26a1383 -r 0c4e821c704b data_manager/kraken2_build_special.py --- a/data_manager/kraken2_build_special.py Tue Mar 05 12:53:00 2019 -0500 +++ b/data_manager/kraken2_build_special.py Tue Mar 05 13:11:02 2019 -0500 |
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| @@ -23,7 +23,7 @@ def kraken2_build_standard(data_manager_dict, kraken2_args, target_directory, data_table_name=DATA_TABLE_NAME): - now = datetime.datetime.utcnow().strftime("%Y-%m-%dT%H:%M:%SZ") + now = datetime.datetime.utcnow().strftime("%Y-%m-%dT%H%M%SZ") special_database_names = { "rdp": "RDP", @@ -34,15 +34,15 @@ database_value = "_".join([ now, kraken2_args["special"], - "kmer-len=" + str(kraken2_args["kmer_len"]), - "minimizer-len=" + str(kraken2_args["minimizer_len"]), - "minimizer-spaces=" + str(kraken2_args["minimizer_spaces"]), + "kmer-len", str(kraken2_args["kmer_len"]), + "minimizer-len", str(kraken2_args["minimizer_len"]), + "minimizer-spaces", str(kraken2_args["minimizer_spaces"]), ]) database_name = " ".join([ special_database_names[kraken2_args["special"]], "(Created:", - now, + now + "," "kmer-len=" + str(kraken2_args["kmer_len"]) + ",", "minimizer-len=" + str(kraken2_args["minimizer_len"]) + ",", "minimizer-spaces=" + str(kraken2_args["minimizer_spaces"]) + ")", |