| Previous changeset 2:7019465fef45 (2014-11-21) Next changeset 4:f4b4030709eb (2014-11-21) |
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Commit message:
samtools_v1_1.xml |
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modified:
samtools_v1_1.xml |
| b |
| diff -r 7019465fef45 -r ff0439a80cdd samtools_v1_1.xml --- a/samtools_v1_1.xml Fri Nov 21 16:38:38 2014 +0900 +++ b/samtools_v1_1.xml Fri Nov 21 17:06:40 2014 +0900 |
| b |
| @@ -3,6 +3,7 @@ <requirement type="package" version="1.1">samtools</requirement> </requirements> <description>samtools version 1.1.</description> + <command interpreter="samtools index">$inputfile</command> <inputs> <conditional name="command_type"> <param name="command_type" type="select" label="Execute samtools command"> @@ -34,13 +35,7 @@ </param> </when> <when value="index"> - <param format="bam" name="inputfile" type="data" label="index file"/> - </when> - <when value="view"> - <param format="bam" name="inputfile" type="data" label="view file"/> - </when> - <when value="mpileup"> - <param format="bam" name="inputfile" type="data" label="mpileup file"/> + <param format="bam" name="inputfile" type="data" label="index bam file"/> </when> </conditional> </inputs> |