Repository 'samtools_v1_1'
hg clone https://testtoolshed.g2.bx.psu.edu/repos/yukke/samtools_v1_1

Changeset 4:f4b4030709eb (2014-11-21)
Previous changeset 3:ff0439a80cdd (2014-11-21) Next changeset 5:2d4f69268768 (2014-11-21)
Commit message:
fixed output
modified:
samtools_v1_1.xml
b
diff -r ff0439a80cdd -r f4b4030709eb samtools_v1_1.xml
--- a/samtools_v1_1.xml Fri Nov 21 17:06:40 2014 +0900
+++ b/samtools_v1_1.xml Fri Nov 21 17:40:45 2014 +0900
b
@@ -3,7 +3,8 @@
     <requirement type="package" version="1.1">samtools</requirement>
   </requirements>
   <description>samtools version 1.1.</description>
-  <command interpreter="samtools index">$inputfile</command>
+  <command interpreter="samtools index">$inputfile
+  2&gt;&amp;1 </command>
   <inputs>
     <conditional name="command_type">
       <param name="command_type" type="select" label="Execute samtools command">