Repository 'crossmap'
hg clone https://testtoolshed.g2.bx.psu.edu/repos/yhoogstrate/crossmap

Changeset 18:d76352081273 (2015-08-26)
Previous changeset 17:a2ca0062cded (2015-08-26) Next changeset 19:434855bda6a4 (2015-08-27)
Commit message:
planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/crossmap_galaxy_wrapper commit 3d756e33e5a551c55cfb91fd95785ce102a8c41f-dirty
modified:
crossmap.xml
tool_dependencies.xml
b
diff -r a2ca0062cded -r d76352081273 crossmap.xml
--- a/crossmap.xml Wed Aug 26 10:47:33 2015 -0400
+++ b/crossmap.xml Wed Aug 26 11:01:29 2015 -0400
b
@@ -381,7 +381,7 @@
             <output name="output" file="test_bed_02_output_a__all.bed"/>
         </test>
         
-    <!-- BigWig --><!-- Malfuncioning in CrossMap 0.2
+    <!-- BigWig --><!-- Malfuncioning in CrossMap 0.2, but patched via galaxy toolshed installer -->
         <test>
             <param name="input_format" value="bigwig"/>
             <param name="index_source" value="history"/>
@@ -391,7 +391,7 @@
             
             <output name="output" file="test_bigwig_01_output_a.bw"/>
             <output name="output2" file="test_bigwig_01_output_a.sorted.bgr"/>
-        </test>-->
+        </test>
     <!-- GFF -->
         <test>
             <param name="input_format" value="gff"/>
b
diff -r a2ca0062cded -r d76352081273 tool_dependencies.xml
--- a/tool_dependencies.xml Wed Aug 26 10:47:33 2015 -0400
+++ b/tool_dependencies.xml Wed Aug 26 11:01:29 2015 -0400
b
@@ -4,6 +4,6 @@
         <repository changeset_revision="34e9010db346" name="package_ucsc_tools_312" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
     <package name="crossmap" version="0.2">
-        <repository changeset_revision="84b0390c3868" name="package_crossmap_0_2" owner="yhoogstrate" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+        <repository changeset_revision="8ec1bf2ae8a9" name="package_crossmap_0_2" owner="yhoogstrate" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
 </tool_dependency>