Repository 'gatk2'
hg clone https://testtoolshed.g2.bx.psu.edu/repos/sanbi-uwc/gatk2

Changeset 5:6e5c52be3502 (2018-04-20)
Previous changeset 4:5805746de7f0 (2018-04-20) Next changeset 6:3a0582c3fb06 (2018-05-25)
Commit message:
planemo upload for repository https://github.com/SANBI-SA/tools-sanbi-uwc/tree/master/tools/gatk2 commit 53a7810567099d231d48b442196c0bb79e664019
modified:
tool_dependencies.xml
variant_recalibrator.xml
b
diff -r 5805746de7f0 -r 6e5c52be3502 tool_dependencies.xml
--- a/tool_dependencies.xml Fri Apr 20 03:42:17 2018 -0400
+++ b/tool_dependencies.xml Fri Apr 20 04:14:46 2018 -0400
b
@@ -24,7 +24,8 @@
     <package name="picard" version="1.56.0">
         <repository changeset_revision="7206dbf34dcd" name="package_picard_1_56_0" owner="devteam" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
-    <package name="ggplot2" version="0.9.3">
-        <repository changeset_revision="ade406d47752" name="package_r_ggplot2_0_9_3" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-    </package>
+    <!-- <package name="ggplot2" version="0.9.3">
+        <repository name="package_r_ggplot2_0_9_3" owner="iuc" />
+    </package> -->
+    
 </tool_dependency>
b
diff -r 5805746de7f0 -r 6e5c52be3502 variant_recalibrator.xml
--- a/variant_recalibrator.xml Fri Apr 20 03:42:17 2018 -0400
+++ b/variant_recalibrator.xml Fri Apr 20 04:14:46 2018 -0400
b
@@ -4,7 +4,7 @@
     <import>gatk2_macros.xml</import>
   </macros>
   <expand macro="requirements">
-    <requirement type="package" version="0.9.3">ggplot2</requirement>
+    <requirement type="package" version="2.2.1">ggplot2</requirement>
   </expand>
   <expand macro="version_command" />
   <command interpreter="python">