| Previous changeset 1:692e8c712915 (2017-05-18) Next changeset 3:7d1a9a91b989 (2017-05-18) |
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Commit message:
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty |
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modified:
tool_dependencies.xml |
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| diff -r 692e8c712915 -r 3e2160197902 tool_dependencies.xml --- a/tool_dependencies.xml Thu May 18 17:40:58 2017 -0400 +++ b/tool_dependencies.xml Thu May 18 17:49:58 2017 -0400 |
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| @@ -68,13 +68,17 @@ <package name="jbrowse_tools" version="1.12.1"> <install version="1.0"> <actions_group> + <action type="setup_perl_environment"> + <repository name="package_perl_5_18" owner="iuc"> + <package name="perl" version="5.18.1" /> + </repository> + <package>XML::Parser</package> + <package>http://search.cpan.org/CPAN/authors/id/C/CJ/CJFIELDS/BioPerl-1.6.922.tar.gz</package> + </action> <actions architecture="x86_64" os="linux"> <action type="download_by_url">http://jbrowse.org/wordpress/wp-content/plugins/download-monitor/download.php?id=105</action> <action type="make_directory">$INSTALL_DIR/jbrowse</action> <action type="shell_command"> - if [ -d "$TMP_WORK_DIR" ] ; then export HOME=$TMP_WORK_DIR ; else export HOME=`mktemp -d` ; fi ; - </action> - <action type="shell_command"> ./setup.sh </action> <action type="move_directory_files"> |