Repository 'samtools_v1_1'
hg clone https://testtoolshed.g2.bx.psu.edu/repos/yukke/samtools_v1_1

Changeset 5:2d4f69268768 (2014-11-21)
Previous changeset 4:f4b4030709eb (2014-11-21) Next changeset 6:7a9c736bc13c (2014-11-21)
Commit message:
Add samtools flagstats
modified:
samtools_v1_1.xml
b
diff -r f4b4030709eb -r 2d4f69268768 samtools_v1_1.xml
--- a/samtools_v1_1.xml Fri Nov 21 17:40:45 2014 +0900
+++ b/samtools_v1_1.xml Fri Nov 21 17:56:10 2014 +0900
b
@@ -38,6 +38,9 @@
       <when value="index">
         <param format="bam" name="inputfile" type="data" label="index bam file"/>
       </when>
+      <when value="flagstat">
+        <param format="bam" name="inputfile" type="data" label="Report bam stats"/>
+      </when>
     </conditional>
   </inputs>
 </tool>