Mercurial > repos > zzhou > spp_phantompeak

comparison spp_wrapper.py @ 16:5648b4efe736 draft

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author zzhou
date Tue, 27 Nov 2012 16:22:26 -0500
parents 8c78c8985afd
children 663ef5410dd7
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15:e689b83b0257 16:5648b4efe736
18 output_rdata_file = sys.argv[5] 18 output_rdata_file = sys.argv[5]
19 output_plot_file = sys.argv[6] 19 output_plot_file = sys.argv[6]
20 output_default_file = sys.argv[7] 20 output_default_file = sys.argv[7]
21 script_path = sys.argv[8] 21 script_path = sys.argv[8]
22 22
23 cmd = "tar -czvf spp_1.10.1.tar spp"
24 os.system(cmd)
25 cmd = "gzip spp_1.10.1.tar"
26 os.system(cmd)
23 cmd = "Rscript %s/deploy_spp.R" % script_path 27 cmd = "Rscript %s/deploy_spp.R" % script_path
24 os.system(cmd) 28 os.system(cmd)
25 29
26 #set file extensions and set mandatory options 30 #set file extensions and set mandatory options
27 #======================================================================================== 31 #========================================================================================