# HG changeset patch # User zzhou # Date 1353954750 18000 # Node ID aec5bf64a8fbb12f945e11211345efcfbf3731ae # Parent 9c3dfa4d079976904abe279888e2e6135f38c584 Uploaded diff -r 9c3dfa4d0799 -r aec5bf64a8fb bamedit.xml --- a/bamedit.xml Mon Nov 26 13:29:53 2012 -0500 +++ b/bamedit.xml Mon Nov 26 13:32:30 2012 -0500 @@ -73,7 +73,7 @@ #end if #end if #if str($input_type.input_type_selector) == 'split': -#set $__options = { 'action':str("split"), 'bamout':str($bamouts1), 'bamout2':str($bamouts2), 'input1':str($input1), 'path':str("\$SCRIPT_PATH") } +#set $__options = { 'action':str("split"), 'bamout':str($bamouts1), 'bamout2':str($bamouts2), 'input1':str($input1), 'path':str(\$SCRIPT_PATH) } #end if #if str($input_type.input_type_selector) == 'filter': #set $__options = { 'action':str("filter"), 'bamout':str($bamoutf), 'input1':str($input1), 'quality':int($input_type.quality) }