Mercurial > repos > zzhou > bamedit
comparison tool_dependencies.xml @ 11:b7e931dbeb3d draft
Uploaded
| author | zzhou |
|---|---|
| date | Fri, 23 Nov 2012 15:51:05 -0500 |
| parents | eec330026c55 |
| children | a3a466d3810a |
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| 10:eec330026c55 | 11:b7e931dbeb3d |
|---|---|
| 1 <?xml version="1.0"?> | 1 <?xml version="1.0"?> |
| 2 <requirements> | 2 <requirements> |
| 3 <requirement type="package">samtools</requirement> | 3 <requirement type="package" version="0.1.18">samtools</requirement> |
| 4 </requirements> | 4 </requirements> |
| 5 <tool_dependency> | 5 <tool_dependency> |
| 6 <package name="samtools" version="0.1.18"> | 6 <package name="samtools" version="0.1.18"> |
| 7 <install version="1.10"> | 7 <install version="1.0"> |
| 8 <actions> | 8 <actions> |
| 9 <action type="download_by_url">http://sourceforge.net/projects/samtools/files/samtools/0.1.18/samtools-0.1.18.tar.bz2</action> | 9 <action type="download_by_url">http://sourceforge.net/projects/samtools/files/samtools/0.1.18/samtools-0.1.18.tar.bz2</action> |
| 10 <action type="shell_command">sed -i .bak -e 's/-lcurses/-lncurses/g' Makefile</action> | 10 <action type="shell_command">sed -i .bak -e 's/-lcurses/-lncurses/g' Makefile</action> |
| 11 <action type="shell_command">make</action> | 11 <action type="shell_command">make</action> |
| 12 <action type="move_file"> | 12 <action type="move_file"> |