# HG changeset patch
# User soh.ishiguro3914@gmail.com
# Date 1416560170 -32400
# Node ID 2d4f69268768b3204e0c577d97983411af5b6a74
# Parent  f4b4030709eb1f714482c176309e27027b1a594d
Add samtools flagstats

diff -r f4b4030709eb -r 2d4f69268768 samtools_v1_1.xml
--- a/samtools_v1_1.xml	Fri Nov 21 17:40:45 2014 +0900
+++ b/samtools_v1_1.xml	Fri Nov 21 17:56:10 2014 +0900
@@ -38,6 +38,9 @@
       <when value="index">
         <param format="bam" name="inputfile" type="data" label="index bam file"/>
       </when>
+      <when value="flagstat">
+        <param format="bam" name="inputfile" type="data" label="Report bam stats"/>
+      </when>
     </conditional>
   </inputs>
 </tool>