# HG changeset patch
# User youyuh48
# Date 1567750516 14400
# Node ID ba3aaae7a229eec13b40abb45fe584c050076b32
# Parent  ee65e517769dfc5540fb9b58e00a87537de13a4c
planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/sniffles

diff -r ee65e517769d -r ba3aaae7a229 sniffles.xml
--- a/sniffles.xml	Sun Aug 25 01:58:51 2019 -0400
+++ b/sniffles.xml	Fri Sep 06 02:15:16 2019 -0400
@@ -5,9 +5,10 @@
   </requirements>
   <command detect_errors="exit_code">
     <![CDATA[
+ln -f -s '$input' input.bam &&
 sniffles
 -t \${GALAXY_SLOTS:-2}
--m '$input'
+-m input.bam
 --${output_format} '$output'
 ## general_options
 #if $general_options.s: