Mercurial > repos > youyuh48 > kraken_tools
diff test-data/Report_Kraken2_SRR1750082.tabular @ 1:7c9b12bda2a6 draft default tip
planemo upload for repository https://github.com/youyuh48/galaxy-tools/tree/master/tools/KrakenTools
| author | youyuh48 |
|---|---|
| date | Sun, 02 May 2021 06:21:24 +0000 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/Report_Kraken2_SRR1750082.tabular Sun May 02 06:21:24 2021 +0000 @@ -0,0 +1,3699 @@ + 15.25 372759 372759 U 0 unclassified + 84.75 2071306 137 R 1 root + 84.65 2068806 144 R1 131567 cellular organisms + 84.59 2067453 1529 D 2 Bacteria + 83.45 2039613 1462 P 1224 Proteobacteria + 83.18 2033061 4066 C 1236 Gammaproteobacteria + 82.37 2013229 384 O 72274 Pseudomonadales + 82.27 2010738 6594 F 468 Moraxellaceae + 81.29 1986793 121309 G 497 Psychrobacter + 47.87 1169998 1169998 S 1699621 Psychrobacter sp. P11F6 + 6.69 163436 163436 S 571800 Psychrobacter sp. G + 6.62 161907 161835 S 330922 Psychrobacter cryohalolentis + 0.00 72 72 S1 335284 Psychrobacter cryohalolentis K5 + 4.34 106015 106015 S 1028416 Psychrobacter sp. DAB_AL43B + 2.76 67488 0 S 334543 Psychrobacter arcticus + 2.76 67488 67488 S1 259536 Psychrobacter arcticus 273-4 + 1.95 47700 47700 S 1699623 Psychrobacter sp. P11G3 + 1.85 45199 45199 S 1720344 Psychrobacter sp. AntiMn-1 + 1.37 33585 33585 S 45610 Psychrobacter urativorans + 1.29 31473 31473 S 1699624 Psychrobacter sp. P11G5 + 0.97 23795 23795 S 1699622 Psychrobacter sp. P2G3 + 0.26 6352 6352 S 2203895 Psychrobacter sp. YP14 + 0.26 6243 6243 S 349106 Psychrobacter sp. PRwf-1 + 0.09 2293 2293 S 261164 Psychrobacter alimentarius + 0.37 8978 1970 G 469 Acinetobacter + 0.04 933 193 G1 909768 Acinetobacter calcoaceticus/baumannii complex + 0.01 227 197 S 470 Acinetobacter baumannii + 0.00 30 30 S1 1400867 Acinetobacter baumannii ZW85-1 + 0.01 185 159 S 106654 Acinetobacter nosocomialis + 0.00 26 26 S1 1343071 Acinetobacter nosocomialis M2 + 0.01 159 149 S 48296 Acinetobacter pittii + 0.00 10 10 S1 871585 Acinetobacter pittii PHEA-2 + 0.01 139 139 S 471 Acinetobacter calcoaceticus + 0.00 30 30 S 1785128 Acinetobacter lactucae + 0.04 887 886 S 28090 Acinetobacter lwoffii + 0.00 1 1 S1 1046625 Acinetobacter lwoffii WJ10621 + 0.02 454 425 S 40214 Acinetobacter johnsonii + 0.00 29 29 S1 1242245 Acinetobacter johnsonii XBB1 + 0.02 396 396 S 1636603 Acinetobacter sp. ACNIH1 + 0.01 364 364 S 108981 Acinetobacter schindleri + 0.01 337 337 S 108980 Acinetobacter ursingii + 0.01 317 317 S 2079596 Acinetobacter sp. SWBY1 + 0.01 261 261 S 756892 Acinetobacter indicus + 0.01 251 251 S 487316 Acinetobacter soli + 0.01 224 224 S 106649 Acinetobacter guillouiae + 0.01 218 218 S 40215 Acinetobacter junii + 0.01 205 205 S 1789224 Acinetobacter larvae + 0.01 190 190 S 1407071 Acinetobacter sp. TGL-Y2 + 0.01 178 178 S 1646498 Acinetobacter sp. TTH0-4 + 0.01 153 153 S 2004646 Acinetobacter sp. WCHA55 + 0.01 153 153 S 1608473 Acinetobacter sp. NCu2D-2 + 0.01 151 151 S 2004644 Acinetobacter sp. WCHA45 + 0.01 147 147 S 1879050 Acinetobacter wuhouensis + 0.01 144 144 S 2136182 Acinetobacter cumulans + 0.01 136 136 S 29430 Acinetobacter haemolyticus + 0.00 120 120 S 1871111 Acinetobacter defluvii + 0.00 114 114 S 1879049 Acinetobacter sp. WCHAc010034 + 0.00 112 112 S 2004647 Acinetobacter sp. WCHAc010052 + 0.00 107 107 S 40216 Acinetobacter radioresistens + 0.00 104 0 S 202950 Acinetobacter baylyi + 0.00 104 104 S1 62977 Acinetobacter baylyi ADP1 + 0.00 86 86 S 1808001 Acinetobacter sp. LoGeW2-3 + 0.00 83 0 S 52133 Acinetobacter venetianus + 0.00 83 83 S1 1197884 Acinetobacter venetianus VE-C3 + 0.00 82 82 S 1758189 Acinetobacter sp. ACNIH2 + 0.00 46 46 S 106648 Acinetobacter bereziniae + 0.00 22 22 S 1324350 Acinetobacter equi + 0.00 14 14 S 1809055 Acinetobacter sp. DUT-2 + 0.00 13 13 S 2004650 Acinetobacter sp. WCHAc010005 + 0.00 6 0 S 1148157 Acinetobacter oleivorans + 0.00 6 6 S1 436717 Acinetobacter oleivorans DR1 + 0.34 8250 210 G 475 Moraxella + 0.27 6700 6700 S 34062 Moraxella osloensis + 0.02 417 417 S 480 Moraxella catarrhalis + 0.02 377 377 S 476 Moraxella bovis + 0.01 217 217 S 386891 Moraxella bovoculi + 0.01 187 187 S 34061 Moraxella cuniculi + 0.01 142 142 S 29433 Moraxella ovis + 0.01 123 0 F1 54393 unclassified Moraxellaceae + 0.01 123 123 S 2283318 Moraxellaceae bacterium HYN0046 + 0.09 2107 23 F 135621 Pseudomonadaceae + 0.08 1978 372 G 286 Pseudomonas + 0.01 257 9 G1 136843 Pseudomonas fluorescens group + 0.00 60 47 S 294 Pseudomonas fluorescens + 0.00 5 5 S1 216595 Pseudomonas fluorescens SBW25 + 0.00 5 5 S1 743713 Pseudomonas fluorescens R124 + 0.00 3 3 S1 205922 Pseudomonas fluorescens Pf0-1 + 0.00 47 47 S 47879 Pseudomonas corrugata + 0.00 32 31 S 380021 Pseudomonas protegens + 0.00 1 1 S1 1124983 Pseudomonas protegens CHA0 + 0.00 26 26 S 75588 Pseudomonas libanensis + 0.00 21 21 S 46679 Pseudomonas mucidolens + 0.00 21 21 S 76758 Pseudomonas orientalis + 0.00 12 12 S 76761 Pseudomonas veronii + 0.00 8 8 S 200450 Pseudomonas trivialis + 0.00 6 6 S 47878 Pseudomonas azotoformans + 0.00 5 1 S 200451 Pseudomonas poae + 0.00 4 4 S1 1282356 Pseudomonas poae RE*1-1-14 + 0.00 4 4 S 76760 Pseudomonas rhodesiae + 0.00 3 3 S 29442 Pseudomonas tolaasii + 0.00 2 2 S 651740 Pseudomonas cedrina + 0.00 1 1 S 169669 Pseudomonas extremorientalis + 0.01 223 7 G1 136845 Pseudomonas putida group + 0.01 168 149 S 303 Pseudomonas putida + 0.00 18 18 S1 1211579 Pseudomonas putida NBRC 14164 + 0.00 1 1 S1 390235 Pseudomonas putida W619 + 0.00 42 42 S 70775 Pseudomonas plecoglossicida + 0.00 4 4 S 47885 Pseudomonas oryzihabitans + 0.00 1 1 S 76759 Pseudomonas monteilii + 0.00 1 1 S 2217867 Pseudomonas sp. SGAir0191 + 0.01 148 0 G1 136846 Pseudomonas stutzeri group + 0.01 125 0 G2 578833 Pseudomonas stutzeri subgroup + 0.01 125 42 S 316 Pseudomonas stutzeri + 0.00 76 76 S1 1123519 Pseudomonas stutzeri DSM 10701 + 0.00 7 7 S1 644801 Pseudomonas stutzeri RCH2 + 0.00 22 22 S 271420 Pseudomonas xanthomarina + 0.00 1 0 S 74829 Pseudomonas balearica + 0.00 1 1 S1 1123016 Pseudomonas balearica DSM 6083 + 0.00 95 0 G1 136841 Pseudomonas aeruginosa group + 0.00 85 85 S 287 Pseudomonas aeruginosa + 0.00 7 7 S 300 Pseudomonas mendocina + 0.00 2 0 G2 1232139 Pseudomonas oleovorans/pseudoalcaligenes group + 0.00 1 1 S 301 Pseudomonas oleovorans + 0.00 1 1 S 1149133 Pseudomonas furukawaii + 0.00 1 1 S 53408 Pseudomonas citronellolis + 0.00 90 43 G1 136849 Pseudomonas syringae group + 0.00 19 19 S 1206777 Pseudomonas sp. Lz4W + 0.00 14 0 G2 251695 Pseudomonas syringae group genomosp. 1 + 0.00 14 1 S 317 Pseudomonas syringae + 0.00 8 0 S1 264449 Pseudomonas syringae group pathovars incertae sedis + 0.00 8 8 S2 103796 Pseudomonas syringae pv. actinidiae + 0.00 3 2 S1 321 Pseudomonas syringae pv. syringae + 0.00 1 1 S2 1324931 Pseudomonas syringae pv. syringae B301D + 0.00 1 1 S1 199201 Pseudomonas syringae pv. lapsa + 0.00 1 1 S1 1357279 Pseudomonas syringae CC1557 + 0.00 5 0 G2 251698 Pseudomonas syringae group genomosp. 2 + 0.00 4 0 S 47877 Pseudomonas amygdali + 0.00 4 4 S1 53707 Pseudomonas amygdali pv. lachrymans + 0.00 1 1 S 29438 Pseudomonas savastanoi + 0.00 4 0 S 36746 Pseudomonas cichorii + 0.00 4 4 S1 1441629 Pseudomonas cichorii JBC1 + 0.00 3 3 S 33069 Pseudomonas viridiflava + 0.00 1 1 S 50340 Pseudomonas fuscovaginae + 0.00 1 0 S 251701 Pseudomonas syringae group genomosp. 3 + 0.00 1 0 S1 323 Pseudomonas syringae pv. tomato + 0.00 1 1 S2 223283 Pseudomonas syringae pv. tomato str. DC3000 + 0.00 58 58 S 2498848 Pseudomonas sp. MPC6 + 0.00 55 55 S 157782 Pseudomonas parafulva + 0.00 43 43 S 1499686 Pseudomonas saudiphocaensis + 0.00 41 41 S 797277 Pseudomonas litoralis + 0.00 40 40 S 515393 Pseudomonas yamanorum + 0.00 38 38 S 1434072 Pseudomonas salegens + 0.00 33 33 S 395598 Pseudomonas reinekei + 0.00 33 33 S 104087 Pseudomonas frederiksbergensis + 0.00 32 32 S 1788301 Pseudomonas versuta + 0.00 28 28 S 1981174 Pseudomonas sp. M30-35 + 0.00 27 27 S 2320270 Pseudomonas sp. DG56-2 + 0.00 26 26 S 1259844 Pseudomonas sp. FGI182 + 0.00 25 25 S 198618 Pseudomonas umsongensis + 0.00 24 24 S 359110 Pseudomonas extremaustralis + 0.00 23 23 S 46677 Pseudomonas agarici + 0.00 23 23 S 2213226 Pseudomonas sp. QZS01 + 0.00 21 0 G1 136842 Pseudomonas chlororaphis group + 0.00 9 9 S 47884 Pseudomonas taetrolens + 0.00 8 5 S 587753 Pseudomonas chlororaphis + 0.00 2 0 S1 587851 Pseudomonas chlororaphis subsp. aureofaciens + 0.00 2 2 S2 1038921 Pseudomonas chlororaphis subsp. aureofaciens 30-84 + 0.00 1 1 S1 1513890 Pseudomonas chlororaphis subsp. piscium + 0.00 4 4 S 296 Pseudomonas fragi + 0.00 20 20 S 1755504 Pseudomonas sp. DY-1 + 0.00 20 20 S 1855331 Pseudomonas sp. A214 + 0.00 14 14 S 1173288 Pseudomonas sp. R4-39-08 + 0.00 13 13 S 2049589 Pseudomonas sp. HLS-6 + 0.00 12 12 S 2479392 Pseudomonas sp. LTJR-52 + 0.00 10 10 S 2005388 Pseudomonas sp. RU47 + 0.00 10 10 S 1931241 Pseudomonas sp. S-6-2 + 0.00 8 8 S 2169583 Pseudomonas sp. SXM-1 + 0.00 6 6 S 86265 Pseudomonas thivervalensis + 0.00 6 6 S 1173284 Pseudomonas sp. R3-52-08 + 0.00 6 6 S 163011 Pseudomonas lini + 0.00 6 6 S 216142 Pseudomonas rhizosphaerae + 0.00 6 6 S 219572 Pseudomonas antarctica + 0.00 5 5 S 1628086 Pseudomonas kribbensis + 0.00 5 5 S 198620 Pseudomonas koreensis + 0.00 4 4 S 2073078 Pseudomonas sp. DTU12.3 + 0.00 4 4 S 1173283 Pseudomonas sp. R3-18-08 + 0.00 4 4 S 1028989 Pseudomonas sp. StFLB209 + 0.00 4 4 S 2045200 Pseudomonas sp. s211(2017) + 0.00 4 0 S 101564 Pseudomonas alcaliphila + 0.00 4 4 S1 741155 Pseudomonas alcaliphila JAB1 + 0.00 4 4 S 2054914 Pseudomonas sp. 02C 26 + 0.00 4 4 S 472181 Pseudomonas sabulinigri + 0.00 4 4 S 658629 Pseudomonas sp. CMR12a + 0.00 3 3 S 143813 Pseudomonas sp. LAB-08 + 0.00 3 3 S 321662 Pseudomonas moraviensis + 0.00 3 3 S 1500687 Pseudomonas sp. St29 + 0.00 3 3 S 1302376 Candidatus Pseudomonas adelgestsugas + 0.00 3 3 S 2201356 Pseudomonas sp. 31-12 + 0.00 2 2 S 122355 Pseudomonas psychrophila + 0.00 2 2 S 237609 Pseudomonas alkylphenolica + 0.00 2 2 S 150396 Pseudomonas sp. MT-1 + 0.00 2 2 S 2018067 Pseudomonas sp. FDAARGOS_380 + 0.00 2 2 S 364197 Pseudomonas pohangensis + 0.00 2 0 S 65741 Pseudomonas knackmussii + 0.00 2 2 S1 1301098 Pseudomonas knackmussii B13 + 0.00 2 2 S 2025658 Pseudomonas sp. NS1(2017) + 0.00 2 2 S 487184 Pseudomonas xinjiangensis + 0.00 1 1 S 1495331 Pseudomonas sp. WCS374 + 0.00 1 1 S 2083053 Pseudomonas sp. SWI44 + 0.00 1 1 S 1853130 Pseudomonas silesiensis + 0.00 1 1 S 69328 Pseudomonas sp. VLB120 + 0.00 1 1 S 157783 Pseudomonas cremoricolorata + 0.00 1 0 S 930166 Pseudomonas brassicacearum + 0.00 1 0 S1 86264 Pseudomonas brassicacearum subsp. brassicacearum + 0.00 1 1 S2 994484 Pseudomonas brassicacearum subsp. brassicacearum NFM421 + 0.00 1 1 S 1856685 Pseudomonas sp. TCU-HL1 + 0.00 1 1 S 658641 Pseudomonas sp. R2-7-07 + 0.00 1 1 S 658630 Pseudomonas sp. CMR5c + 0.00 1 1 S 237610 Pseudomonas psychrotolerans + 0.00 1 1 S 253237 Pseudomonas sp. phDV1 + 0.00 1 1 S 2505979 Pseudomonas sp. 11K1 + 0.00 1 0 S 312306 Pseudomonas entomophila + 0.00 1 1 S1 384676 Pseudomonas entomophila L48 + 0.00 98 0 G 1849530 Oblitimonas + 0.00 98 98 S 1697053 Oblitimonas alkaliphila + 0.00 5 0 F1 190017 unclassified Pseudomonadaceae + 0.00 5 5 S 2079806 Pseudomonadaceae bacterium SI-3 + 0.00 3 0 F1 351 Azotobacter group + 0.00 3 0 G 352 Azotobacter + 0.00 2 2 S 354 Azotobacter vinelandii + 0.00 1 1 S 353 Azotobacter chroococcum + 0.30 7241 505 O 91347 Enterobacterales + 0.11 2689 522 F 543 Enterobacteriaceae + 0.01 362 56 G 547 Enterobacter + 0.01 232 48 G1 354276 Enterobacter cloacae complex + 0.00 52 52 S 2027919 Enterobacter cloacae complex sp. + 0.00 49 38 S 550 Enterobacter cloacae + 0.00 9 0 S1 336306 Enterobacter cloacae subsp. cloacae + 0.00 9 9 S2 716541 Enterobacter cloacae subsp. cloacae ATCC 13047 + 0.00 2 0 S1 69219 Enterobacter cloacae subsp. dissolvens + 0.00 2 2 S2 1104326 Enterobacter cloacae subsp. dissolvens SDM + 0.00 29 29 S 1812935 Enterobacter roggenkampii + 0.00 18 18 S 61645 Enterobacter asburiae + 0.00 15 15 S 69218 Enterobacter cancerogenus + 0.00 13 8 S 158836 Enterobacter hormaechei + 0.00 2 2 S1 301105 Enterobacter hormaechei subsp. hormaechei + 0.00 2 2 S1 1812934 Enterobacter hormaechei subsp. hoffmannii + 0.00 1 1 S1 1296536 Enterobacter hormaechei subsp. xiangfangensis + 0.00 4 4 S 299767 Enterobacter ludwigii + 0.00 3 3 S 208224 Enterobacter kobei + 0.00 1 1 S 1915310 Enterobacter cloacae complex sp. ECNIH7 + 0.00 25 25 S 881260 Enterobacter bugandensis + 0.00 12 12 S 1692238 Enterobacter sp. FY-07 + 0.00 12 12 S 1914861 Enterobacter sp. SA187 + 0.00 11 11 S 399742 Enterobacter sp. 638 + 0.00 6 6 S 885040 Enterobacter soli + 0.00 4 4 S 1166130 Enterobacter sp. R4-368 + 0.00 2 2 S 2500132 Enterobacter sp. N18-03635 + 0.00 1 1 S 1827481 Enterobacter sp. ODB01 + 0.00 1 1 S 1977566 Enterobacter sp. Crenshaw + 0.01 290 119 G 544 Citrobacter + 0.00 104 47 G1 1344959 Citrobacter freundii complex + 0.00 31 31 S 546 Citrobacter freundii + 0.00 9 9 S 67827 Citrobacter werkmanii + 0.00 9 9 S 2077149 Citrobacter freundii complex sp. CFNIH9 + 0.00 7 7 S 1639133 Citrobacter portucalensis + 0.00 1 1 S 2077147 Citrobacter freundii complex sp. CFNIH3 + 0.00 23 23 S 2566012 Citrobacter sp. CF971 + 0.00 13 0 S 67825 Citrobacter rodentium + 0.00 13 13 S1 637910 Citrobacter rodentium ICC168 + 0.00 11 3 S 35703 Citrobacter amalonaticus + 0.00 8 8 S1 1261127 Citrobacter amalonaticus Y19 + 0.00 8 8 S 2546350 Citrobacter sp. LY-1 + 0.00 7 4 S 545 Citrobacter koseri + 0.00 3 3 S1 290338 Citrobacter koseri ATCC BAA-895 + 0.00 3 3 S 2562449 Citrobacter sp. SNU WT2 + 0.00 1 1 S 67824 Citrobacter farmeri + 0.00 1 1 S 1703250 Citrobacter sp. CRE-46 + 0.01 225 73 G 570 Klebsiella + 0.00 52 49 S 573 Klebsiella pneumoniae + 0.00 3 3 S1 72407 Klebsiella pneumoniae subsp. pneumoniae + 0.00 37 26 S 548 Klebsiella aerogenes + 0.00 11 11 S1 1028307 Klebsiella aerogenes KCTC 2190 + 0.00 32 32 S 571 Klebsiella oxytoca + 0.00 17 17 S 1134687 Klebsiella michiganensis + 0.00 5 5 S 2153354 Klebsiella sp. WCHKl090001 + 0.00 3 3 S 1463165 Klebsiella quasipneumoniae + 0.00 2 2 S 244366 Klebsiella variicola + 0.00 2 2 S 1972757 Klebsiella sp. PO552 + 0.00 1 1 S 1905288 Klebsiella sp. LTGPAF-6F + 0.00 1 1 S 2488567 Klebsiella sp. FDAARGOS_511 + 0.01 208 0 F1 191675 unclassified Enterobacteriaceae + 0.01 183 2 F2 36866 unclassified Enterobacteriaceae (miscellaneous) + 0.01 138 138 S 891974 Plautia stali symbiont + 0.00 19 19 S 2066051 Enterobacteriaceae bacterium ENNIH1 + 0.00 15 15 S 693444 Enterobacteriaceae bacterium strain FGI 57 + 0.00 9 9 S 1920109 Enterobacteriaceae bacterium ENNIH2 + 0.00 25 0 F2 84563 ant, tsetse, mealybug, aphid, etc. endosymbionts + 0.00 15 0 F3 146507 aphid secondary symbionts + 0.00 9 0 G 568987 Candidatus Hamiltonella + 0.00 9 9 S 138072 Candidatus Hamiltonella defensa + 0.00 3 3 S 134287 secondary endosymbiont of Heteropsylla cubana + 0.00 3 3 S 1199245 secondary endosymbiont of Ctenarytaina eucalypti + 0.00 10 0 F3 84564 ant endosymbionts + 0.00 10 0 G 203804 Candidatus Blochmannia + 0.00 7 7 S 203907 Candidatus Blochmannia floridanus + 0.00 2 0 S 101534 Candidatus Blochmannia pennsylvanicus + 0.00 2 2 S1 291272 Candidatus Blochmannia pennsylvanicus str. BPEN + 0.00 1 0 G1 711328 unclassified Candidatus Blochmannia endosymbionts + 0.00 1 1 S 1505597 Blochmannia endosymbiont of Camponotus (Colobopsis) obliquus + 0.01 205 28 G 561 Escherichia + 0.01 128 123 S 562 Escherichia coli + 0.00 2 2 S1 405955 Escherichia coli APEC O1 + 0.00 1 0 S1 2233553 Escherichia coli O43 + 0.00 1 1 S2 1055541 Escherichia coli O43 str. RM10042 + 0.00 1 1 S1 930406 Escherichia coli O157:H16 + 0.00 1 1 S1 696406 Escherichia coli UMNK88 + 0.00 35 35 S 208962 Escherichia albertii + 0.00 13 12 S 564 Escherichia fergusonii + 0.00 1 1 S1 585054 Escherichia fergusonii ATCC 35469 + 0.00 1 1 S 2044467 Escherichia sp. E4742 + 0.01 184 13 G 590 Salmonella + 0.01 165 59 S 28901 Salmonella enterica + 0.00 70 25 S1 59201 Salmonella enterica subsp. enterica + 0.00 31 0 S2 598 Salmonella enterica subsp. enterica serovar Rubislaw + 0.00 31 31 S3 938143 Salmonella enterica subsp. enterica serovar Rubislaw str. ATCC 10717 + 0.00 3 3 S2 90371 Salmonella enterica subsp. enterica serovar Typhimurium + 0.00 3 3 S2 2564310 Salmonella enterica subsp. enterica serovar Carmel + 0.00 3 3 S2 340188 Salmonella enterica subsp. enterica serovar Cerro + 0.00 3 0 S2 189201 Salmonella enterica subsp. enterica serovar Cubana + 0.00 3 3 S3 1271863 Salmonella enterica subsp. enterica serovar Cubana str. CFSAN002050 + 0.00 1 0 S2 611 Salmonella enterica subsp. enterica serovar Heidelberg + 0.00 1 1 S3 1160717 Salmonella enterica subsp. enterica serovar Heidelberg str. B182 + 0.00 1 0 S2 28150 Salmonella enterica subsp. enterica serovar Senftenberg + 0.00 1 1 S3 1399047 Salmonella enterica subsp. enterica serovar Senftenberg str. CFSAN004025 + 0.00 17 17 S1 59204 Salmonella enterica subsp. diarizonae + 0.00 13 10 S1 59202 Salmonella enterica subsp. salamae + 0.00 2 2 S2 2577863 Salmonella enterica subsp. salamae serovar 56:z10:e,n,x + 0.00 1 0 S2 1243601 Salmonella enterica subsp. salamae serovar 55:k:z39 + 0.00 1 1 S3 1243602 Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K + 0.00 6 6 S1 59205 Salmonella enterica subsp. houtenae + 0.00 6 6 S 54736 Salmonella bongori + 0.01 177 30 G 1330547 Kosakonia + 0.00 48 48 S 2492396 Kosakonia sp. CCTCC M2018092 + 0.00 45 38 S 208223 Kosakonia cowanii + 0.00 7 7 S1 1300165 Kosakonia cowanii JCM 10956 = DSM 18146 + 0.00 36 32 S 1158459 Kosakonia sacchari + 0.00 4 4 S1 1235834 Kosakonia sacchari SP1 + 0.00 10 10 S 283686 Kosakonia radicincitans + 0.00 8 8 S 497725 Kosakonia oryzae + 0.01 137 29 G 413496 Cronobacter + 0.00 27 27 S 28141 Cronobacter sakazakii + 0.00 27 0 S 1163710 Cronobacter condimenti + 0.00 27 27 S1 1073999 Cronobacter condimenti 1330 + 0.00 20 0 S 413497 Cronobacter dublinensis + 0.00 20 0 S1 413498 Cronobacter dublinensis subsp. dublinensis + 0.00 20 20 S2 1159554 Cronobacter dublinensis subsp. dublinensis LMG 23823 + 0.00 11 0 S 413501 Cronobacter muytjensii + 0.00 11 11 S1 1159613 Cronobacter muytjensii ATCC 51329 + 0.00 9 0 S 413502 Cronobacter turicensis + 0.00 9 9 S1 693216 Cronobacter turicensis z3032 + 0.00 9 0 S 535744 Cronobacter universalis + 0.00 9 9 S1 1074000 Cronobacter universalis NCTC 9529 + 0.00 5 3 S 413503 Cronobacter malonaticus + 0.00 2 2 S1 1159491 Cronobacter malonaticus LMG 23826 + 0.00 110 82 G 83654 Leclercia + 0.00 17 17 S 83655 Leclercia adecarboxylata + 0.00 6 6 S 2282309 Leclercia sp. W17 + 0.00 2 2 S 1920114 Leclercia sp. LSNIH1 + 0.00 2 2 S 1920116 Leclercia sp. LSNIH3 + 0.00 1 1 S 2282310 Leclercia sp. W6 + 0.00 52 1 G 158483 Cedecea + 0.00 34 34 S 158822 Cedecea neteri + 0.00 17 17 S 158823 Cedecea lapagei + 0.00 46 0 G 1330546 Pluralibacter + 0.00 31 31 S 61647 Pluralibacter gergoviae + 0.00 15 13 S 1334193 [Enterobacter] lignolyticus + 0.00 2 2 S1 701347 [Enterobacter] lignolyticus SCF1 + 0.00 32 0 G 1903434 Atlantibacter + 0.00 32 32 S 565 Atlantibacter hermannii + 0.00 25 0 G 1330545 Lelliottia + 0.00 15 15 S 61646 Lelliottia amnigena + 0.00 6 6 S 2153385 Lelliottia sp. WB101 + 0.00 4 4 S 1907578 Lelliottia jeotgali + 0.00 24 3 G 160674 Raoultella + 0.00 9 9 S 577 Raoultella terrigena + 0.00 8 8 S 54291 Raoultella ornithinolytica + 0.00 4 4 S 575 Raoultella planticola + 0.00 22 0 G 929812 Gibbsiella + 0.00 22 22 S 929813 Gibbsiella quercinecans + 0.00 17 0 G 2172100 Limnobaculum + 0.00 17 17 S 2172103 Limnobaculum parvum + 0.00 14 0 G 1780190 Izhakiella + 0.00 14 14 S 2579935 Izhakiella sp. KSNA2 + 0.00 9 0 G 82976 Buttiauxella + 0.00 9 9 S 2479367 Buttiauxella sp. 3AFRM03 + 0.00 6 0 G 620 Shigella + 0.00 4 4 S 624 Shigella sonnei + 0.00 1 1 S 622 Shigella dysenteriae + 0.00 1 0 S 623 Shigella flexneri + 0.00 1 1 S1 1617964 Shigella flexneri 4c + 0.00 6 0 G 579 Kluyvera + 0.00 6 6 S 61648 Kluyvera intermedia + 0.00 5 0 G 1048757 Candidatus Moranella + 0.00 5 5 S 1048758 Candidatus Moranella endobia + 0.00 5 0 G 401618 Candidatus Riesia + 0.00 3 3 S 428411 Candidatus Riesia pediculischaeffi + 0.00 2 2 S 401619 Candidatus Riesia pediculicola + 0.00 4 0 G 1335483 Shimwellia + 0.00 4 4 S 563 Shimwellia blattae + 0.00 2 0 G 409304 Candidatus Ishikawaella + 0.00 2 0 S 168169 Candidatus Ishikawaella capsulata + 0.00 2 2 S1 476281 Candidatus Ishikawaella capsulata Mpkobe + 0.08 2025 61 F 1903409 Erwiniaceae + 0.06 1546 194 G 53335 Pantoea + 0.02 385 362 S 470934 Pantoea vagans + 0.00 23 23 S1 712898 Pantoea vagans C9-1 + 0.01 193 0 G1 1654067 Pantoea agglomerans group + 0.01 193 193 S 549 Pantoea agglomerans + 0.01 144 144 S 1484158 Pantoea sp. PSNIH1 + 0.01 139 99 S 553 Pantoea ananatis + 0.00 36 36 S1 1123863 Pantoea ananatis LMG 5342 + 0.00 2 2 S1 706191 Pantoea ananatis LMG 20103 + 0.00 2 2 S1 932677 Pantoea ananatis AJ13355 + 0.01 135 135 S 592316 Pantoea sp. At-9b + 0.00 116 116 S 2575375 Pantoea sp. SO10 + 0.00 91 91 S 1076550 Pantoea rwandensis + 0.00 61 0 S 66269 Pantoea stewartii + 0.00 61 0 S1 66271 Pantoea stewartii subsp. stewartii + 0.00 61 61 S2 660596 Pantoea stewartii subsp. stewartii DC283 + 0.00 55 55 S 1891675 Pantoea alhagi + 0.00 29 29 S 1484157 Pantoea sp. PSNIH2 + 0.00 4 4 S 1235990 Candidatus Pantoea carbekii + 0.01 273 39 G 551 Erwinia + 0.00 78 78 S 1619313 Erwinia gerundensis + 0.00 56 10 S 552 Erwinia amylovora + 0.00 26 26 S1 716540 Erwinia amylovora ATCC 49946 + 0.00 20 20 S1 1407064 Erwinia amylovora LA637 + 0.00 51 0 S 338565 Erwinia tasmaniensis + 0.00 51 51 S1 465817 Erwinia tasmaniensis Et1/99 + 0.00 22 22 S 55211 Erwinia persicina + 0.00 18 0 S 182337 Erwinia billingiae + 0.00 18 18 S1 634500 Erwinia billingiae Eb661 + 0.00 6 6 S 2547962 Erwinia sp. QL-Z3 + 0.00 2 2 S 215689 Erwinia sp. Ejp617 + 0.00 1 1 S 79967 Erwinia pyrifoliae + 0.00 94 0 G 2100764 Mixta + 0.00 88 88 S 665914 Mixta gaviniae + 0.00 6 6 S 665913 Mixta calida + 0.00 36 0 G 82986 Tatumella + 0.00 18 18 S 53336 Tatumella citrea + 0.00 18 18 S 82987 Tatumella ptyseos + 0.00 15 0 G 32199 Buchnera + 0.00 15 0 S 9 Buchnera aphidicola + 0.00 15 15 S1 98804 Buchnera aphidicola (Tuberolachnus salignus) + 0.03 738 2 F 1903411 Yersiniaceae + 0.01 344 136 G 613 Serratia + 0.00 37 34 S 615 Serratia marcescens + 0.00 2 2 S1 1334564 Serratia marcescens SM39 + 0.00 1 0 S1 211759 Serratia marcescens subsp. marcescens + 0.00 1 1 S2 273526 Serratia marcescens subsp. marcescens Db11 + 0.00 37 37 S 137545 Serratia quinivorans + 0.00 33 33 S 47917 Serratia fonticola + 0.00 26 18 S 82996 Serratia plymuthica + 0.00 5 5 S1 1154756 Serratia plymuthica PRI-2C + 0.00 3 3 S1 682634 Serratia plymuthica 4Rx13 + 0.00 20 20 S 618 Serratia odorifera + 0.00 17 17 S 61652 Serratia rubidaea + 0.00 11 11 S 104623 Serratia sp. ATCC 39006 + 0.00 7 5 S 614 Serratia liquefaciens + 0.00 2 2 S1 1346614 Serratia liquefaciens ATCC 27592 + 0.00 5 5 S 1759437 Serratia sp. YD25 + 0.00 3 3 S 61651 Serratia ficaria + 0.00 3 3 S 2420306 Serratia sp. FDAARGOS_506 + 0.00 2 0 S 28151 Serratia proteamaculans + 0.00 2 2 S1 399741 Serratia proteamaculans 568 + 0.00 2 2 S 2447890 Serratia sp. 1D1416 + 0.00 1 1 S 2033438 Serratia sp. MYb239 + 0.00 1 1 S 2448483 Serratia sp. 3ACOL1 + 0.00 1 1 S 2482769 Serratia sp. P2ACOL2 + 0.00 1 1 S 671990 Serratia sp. FGI94 + 0.00 1 1 S 488142 Serratia sp. SCBI + 0.01 297 67 G 629 Yersinia + 0.01 137 73 S 630 Yersinia enterocolitica + 0.00 64 64 S1 1443113 Yersinia enterocolitica LC20 + 0.00 25 25 S 29486 Yersinia ruckeri + 0.00 24 23 S 29484 Yersinia frederiksenii + 0.00 1 1 S1 1454377 Yersinia frederiksenii Y225 + 0.00 11 0 S 29483 Yersinia aldovae + 0.00 11 11 S1 1453495 Yersinia aldovae 670-83 + 0.00 9 9 S 631 Yersinia intermedia + 0.00 9 4 G1 1649845 Yersinia pseudotuberculosis complex + 0.00 3 3 S 633 Yersinia pseudotuberculosis + 0.00 2 2 S 367190 Yersinia similis + 0.00 8 8 S 935293 Yersinia entomophaga + 0.00 4 4 S 29485 Yersinia rohdei + 0.00 3 3 S 263819 Yersinia aleksiciae + 0.00 56 28 G 34037 Rahnella + 0.00 23 1 S 34038 Rahnella aquatilis + 0.00 22 22 S1 745277 Rahnella aquatilis CIP 78.65 = ATCC 33071 + 0.00 5 5 S 1805933 Rahnella sp. ERMR1:05 + 0.00 20 0 G 1964366 Nissabacter + 0.00 20 20 S 2126321 Nissabacter sp. SGAir0207 + 0.00 14 0 G 1745211 Chania + 0.00 14 0 S 1639108 Chania multitudinisentens + 0.00 14 14 S1 1441930 Chania multitudinisentens RB-25 + 0.00 5 0 G 1927833 Candidatus Fukatsuia + 0.00 5 5 S 1878942 Candidatus Fukatsuia symbiotica + 0.02 588 20 F 1903414 Morganellaceae + 0.01 238 0 G 586 Providencia + 0.00 109 64 S 587 Providencia rettgeri + 0.00 45 45 S1 1141663 Providencia rettgeri Dmel1 + 0.00 45 45 S 158850 Providencia rustigianii + 0.00 25 25 S 2027290 Providencia sp. WCHPr000369 + 0.00 17 17 S 333962 Providencia heimbachae + 0.00 16 16 S 588 Providencia stuartii + 0.00 14 0 S 516075 Providencia sneebia + 0.00 14 14 S1 1141660 Providencia sneebia DSM 19967 + 0.00 12 12 S 126385 Providencia alcalifaciens + 0.01 128 8 G 583 Proteus + 0.00 61 49 S 584 Proteus mirabilis + 0.00 12 12 S1 1266738 Proteus mirabilis BB2000 + 0.00 54 54 S 585 Proteus vulgaris + 0.00 5 5 S 183417 Proteus hauseri + 0.00 100 1 G 29487 Photorhabdus + 0.00 43 0 S 2218628 Photorhabdus laumondii + 0.00 43 43 S1 141679 Photorhabdus laumondii subsp. laumondii + 0.00 30 30 S 291112 Photorhabdus asymbiotica + 0.00 26 26 S 230089 Photorhabdus thracensis + 0.00 69 0 G 626 Xenorhabdus + 0.00 35 35 S 628 Xenorhabdus nematophila + 0.00 19 19 S 351679 Xenorhabdus hominickii + 0.00 12 12 S 351671 Xenorhabdus doucetiae + 0.00 2 0 S 40577 Xenorhabdus poinarii + 0.00 2 2 S1 1354304 Xenorhabdus poinarii G6 + 0.00 1 0 S 40576 Xenorhabdus bovienii + 0.00 1 1 S1 406818 Xenorhabdus bovienii SS-2004 + 0.00 30 0 G 581 Morganella + 0.00 30 30 S 582 Morganella morganii + 0.00 3 0 G 637 Arsenophonus + 0.00 3 3 S 638 Arsenophonus nasoniae + 0.02 507 1 F 1903410 Pectobacteriaceae + 0.01 281 37 G 204037 Dickeya + 0.00 81 48 S 204042 Dickeya zeae + 0.00 26 26 S1 1224153 Dickeya zeae MK19 + 0.00 3 3 S1 1427366 Dickeya zeae EC1 + 0.00 2 2 S1 590409 Dickeya zeae Ech586 + 0.00 2 2 S1 1224147 Dickeya zeae NCPPB 3532 + 0.00 75 75 S 1089444 Dickeya solani + 0.00 36 28 S 204038 Dickeya dadantii + 0.00 7 7 S1 1224149 Dickeya dadantii NCPPB 3537 + 0.00 1 0 S1 204040 Dickeya dadantii subsp. dieffenbachiae + 0.00 1 1 S2 1223574 Dickeya dadantii subsp. dieffenbachiae NCPPB 2976 + 0.00 20 20 S 568768 Dickeya sp. NCPPB 569 + 0.00 14 4 S 556 Dickeya chrysanthemi + 0.00 8 8 S1 1223569 Dickeya chrysanthemi NCPPB 402 + 0.00 1 1 S1 1223571 Dickeya chrysanthemi NCPPB 516 + 0.00 1 1 S1 1224148 Dickeya chrysanthemi NCPPB 3533 + 0.00 12 0 S 69223 Dickeya paradisiaca + 0.00 12 12 S1 1224150 Dickeya paradisiaca NCPPB 2511 + 0.00 3 2 S 204039 Dickeya dianthicola + 0.00 1 1 S1 1226343 Dickeya dianthicola GBBC 2039 + 0.00 2 2 S 1778540 Dickeya fangzhongdai + 0.00 1 1 S 568766 Dickeya sp. NCPPB 3274 + 0.01 140 26 G 122277 Pectobacterium + 0.00 46 0 S 55208 Pectobacterium wasabiae + 0.00 46 46 S1 1175631 Pectobacterium wasabiae CFBP 3304 + 0.00 33 3 S 554 Pectobacterium carotovorum + 0.00 27 27 S1 180957 Pectobacterium carotovorum subsp. brasiliense + 0.00 3 0 S1 555 Pectobacterium carotovorum subsp. carotovorum + 0.00 2 2 S2 1218933 Pectobacterium carotovorum subsp. carotovorum PCC21 + 0.00 1 1 S2 561230 Pectobacterium carotovorum subsp. carotovorum PC1 + 0.00 18 13 S 29471 Pectobacterium atrosepticum + 0.00 5 5 S1 218491 Pectobacterium atrosepticum SCRI1043 + 0.00 14 14 S 1905730 Pectobacterium parmentieri + 0.00 3 3 S 2042057 Pectobacterium polaris + 0.00 73 13 G 71655 Brenneria + 0.00 44 44 S 55213 Brenneria rubrifaciens + 0.00 16 16 S 1109412 Brenneria goodwinii + 0.00 11 5 G 84565 Sodalis + 0.00 3 0 S 63612 Sodalis glossinidius + 0.00 3 3 S1 343509 Sodalis glossinidius str. 'morsitans' + 0.00 2 0 S 1486991 Candidatus Sodalis pierantonius + 0.00 2 2 S1 2342 Candidatus Sodalis pierantonius str. SOPE + 0.00 1 1 S 1239307 Sodalis praecaptivus + 0.00 1 0 G 1082702 Lonsdalea + 0.00 1 1 S 1082704 Lonsdalea britannica + 0.00 69 6 F 1903412 Hafniaceae + 0.00 23 0 G 82982 Obesumbacterium + 0.00 23 23 S 82983 Obesumbacterium proteus + 0.00 20 13 G 568 Hafnia + 0.00 4 4 S 569 Hafnia alvei + 0.00 3 3 S 546367 Hafnia paralvei + 0.00 20 7 G 635 Edwardsiella + 0.00 9 9 S 67780 Edwardsiella ictaluri + 0.00 3 3 S 636 Edwardsiella tarda + 0.00 1 1 S 93378 Edwardsiella hoshinae + 0.00 61 0 F 1903416 Budviciaceae + 0.00 61 0 G 82984 Pragia + 0.00 42 42 S 82985 Pragia fontium + 0.00 19 19 S 2498113 Pragia sp. CF-458 + 0.00 59 0 O1 451511 unclassified Enterobacterales + 0.00 37 0 G 702 Plesiomonas + 0.00 37 37 S 703 Plesiomonas shigelloides + 0.00 22 0 G 447792 Phytobacter + 0.00 22 22 S 1972431 Phytobacter ursingii + 0.13 3298 263 O 135622 Alteromonadales + 0.04 1063 0 F 267888 Pseudoalteromonadaceae + 0.04 1063 393 G 53246 Pseudoalteromonas + 0.00 105 105 S 247523 Pseudoalteromonas aliena + 0.00 69 69 S 43658 Pseudoalteromonas rubra + 0.00 67 0 S 166935 Pseudoalteromonas translucida + 0.00 67 67 S1 1315283 Pseudoalteromonas translucida KMM 520 + 0.00 65 16 S 288 Pseudoalteromonas atlantica + 0.00 49 49 S1 342610 Pseudoalteromonas atlantica T6c + 0.00 52 49 S 176102 Pseudoalteromonas agarivorans + 0.00 3 3 S1 1312369 Pseudoalteromonas agarivorans DSM 14585 + 0.00 43 43 S 314281 Pseudoalteromonas tunicata + 0.00 37 37 S 1348114 Pseudoalteromonas piratica + 0.00 34 34 S 621376 Pseudoalteromonas donghaensis + 0.00 31 0 S 28107 Pseudoalteromonas espejiana + 0.00 31 31 S1 1314869 Pseudoalteromonas espejiana DSM 9414 + 0.00 25 9 S 298657 Pseudoalteromonas spongiae + 0.00 16 16 S1 1117319 Pseudoalteromonas spongiae UST010723-006 + 0.00 22 22 S 43662 Pseudoalteromonas piscicida + 0.00 21 21 S 227 Pseudoalteromonas carrageenovora + 0.00 20 20 S 43657 Pseudoalteromonas luteoviolacea + 0.00 14 14 S 2583375 Pseudoalteromonas sp. 16-SW-7 + 0.00 14 14 S 1390185 Pseudoalteromonas sp. DL-6 + 0.00 14 0 S 394751 Pseudoalteromonas arctica + 0.00 14 14 S1 1117313 Pseudoalteromonas arctica A 37-1-2 + 0.00 9 9 S 1709477 Pseudoalteromonas sp. R3 + 0.00 7 7 S 283699 Pseudoalteromonas sp. Bsw20308 + 0.00 6 6 S 267375 Pseudoalteromonas marina + 0.00 5 5 S 161398 Pseudoalteromonas phenolica + 0.00 5 5 S 1514074 Pseudoalteromonas sp. NC201 + 0.00 3 3 S 234831 Pseudoalteromonas sp. SM9913 + 0.00 2 2 S 2490635 Pseudoalteromonas sp. Xi13 + 0.04 901 0 F 267890 Shewanellaceae + 0.04 870 210 G 22 Shewanella + 0.00 70 70 S 2520507 Shewanella sp. D4-2 + 0.00 62 0 S 192073 Shewanella denitrificans + 0.00 62 62 S1 318161 Shewanella denitrificans OS217 + 0.00 56 56 S 2588449 Shewanella sp. SM1901 + 0.00 47 47 S 150120 Shewanella livingstonensis + 0.00 43 0 S 60961 Shewanella woodyi + 0.00 43 43 S1 392500 Shewanella woodyi ATCC 51908 + 0.00 37 37 S 43661 Shewanella benthica + 0.00 33 0 S 404011 Shewanella piezotolerans + 0.00 33 33 S1 225849 Shewanella piezotolerans WP3 + 0.00 31 31 S 256839 Shewanella decolorationis + 0.00 27 23 S 62322 Shewanella baltica + 0.00 3 3 S1 402882 Shewanella baltica OS185 + 0.00 1 1 S1 693974 Shewanella baltica BA175 + 0.00 25 25 S 1930557 Shewanella sp. FDAARGOS_354 + 0.00 24 0 S 60217 Shewanella violacea + 0.00 24 24 S1 637905 Shewanella violacea DSS12 + 0.00 22 0 S 271098 Shewanella halifaxensis + 0.00 22 22 S1 458817 Shewanella halifaxensis HAW-EB4 + 0.00 20 0 S 70863 Shewanella oneidensis + 0.00 20 20 S1 211586 Shewanella oneidensis MR-1 + 0.00 18 18 S 2590015 Shewanella sp. SNU WT4 + 0.00 18 18 S 225848 Shewanella psychrophila + 0.00 17 17 S 2487742 Shewanella sp. M2 + 0.00 14 14 S 2059264 Shewanella sp. Pdp11 + 0.00 14 0 S 60478 Shewanella amazonensis + 0.00 14 14 S1 326297 Shewanella amazonensis SB2B + 0.00 11 11 S 260364 Shewanella marisflavi + 0.00 9 5 S 24 Shewanella putrefaciens + 0.00 4 4 S1 319224 Shewanella putrefaciens CN-32 + 0.00 9 9 S 2575361 Shewanella sp. MEBiC00475 + 0.00 9 9 S 1965282 Shewanella sp. TH2012 + 0.00 7 0 S 359303 Shewanella loihica + 0.00 7 7 S1 323850 Shewanella loihica PV-4 + 0.00 7 0 S 271097 Shewanella sediminis + 0.00 7 7 S1 425104 Shewanella sediminis HAW-EB3 + 0.00 7 0 S 56812 Shewanella frigidimarina + 0.00 7 7 S1 318167 Shewanella frigidimarina NCIMB 400 + 0.00 6 6 S 2029986 Shewanella sp. WE21 + 0.00 5 5 S 93973 Shewanella japonica + 0.00 4 4 S 60480 Shewanella sp. MR-4 + 0.00 4 0 S 70864 Shewanella pealeana + 0.00 4 4 S1 398579 Shewanella pealeana ATCC 700345 + 0.00 4 4 S 38313 Shewanella algae + 0.00 31 0 G 2547964 Parashewanella + 0.00 28 28 S 2547970 Parashewanella sp. MEBiC05444 + 0.00 3 3 S 342950 Parashewanella spongiae + 0.03 628 0 F 72275 Alteromonadaceae + 0.01 224 23 G 2742 Marinobacter + 0.00 58 58 S 1415568 Marinobacter sp. LV10R510-11A + 0.00 45 45 S 330734 Marinobacter psychrophilus + 0.00 35 35 S 2547598 Marinobacter sp. JH2 + 0.00 28 28 S 1420917 Marinobacter salarius + 0.00 18 12 S 2743 Marinobacter hydrocarbonoclasticus + 0.00 5 5 S1 351348 Marinobacter hydrocarbonoclasticus VT8 + 0.00 1 1 S1 1163748 Marinobacter hydrocarbonoclasticus ATCC 49840 + 0.00 5 5 S 1420916 Marinobacter similis + 0.00 5 5 S 1671721 Marinobacter sp. CP1 + 0.00 4 4 S 2488665 Marinobacter sp. NP-4(2019) + 0.00 1 1 S 490759 Marinobacter sp. BSs20148 + 0.00 1 1 S 1874317 Marinobacter salinus + 0.00 1 1 S 2304594 Marinobacter sp. Arc7-DN-1 + 0.01 123 24 G 226 Alteromonas + 0.00 47 46 S 314275 Alteromonas mediterranea + 0.00 1 1 S1 1774373 Alteromonas mediterranea DE + 0.00 22 22 S 233316 Alteromonas stellipolaris + 0.00 16 16 S 2267264 Alteromonas sp. RKMC-009 + 0.00 10 7 S 28108 Alteromonas macleodii + 0.00 2 2 S1 1004785 Alteromonas macleodii str. 'Black Sea 11' + 0.00 1 1 S1 529120 Alteromonas macleodii ATCC 27126 + 0.00 2 2 S 589873 Alteromonas australica + 0.00 1 1 S 715451 Alteromonas naphthalenivorans + 0.00 1 1 S 2358187 Alteromonas sp. 76-1 + 0.00 117 0 G 89404 Glaciecola + 0.00 107 107 S 983545 Glaciecola sp. 4H-3-7+YE-5 + 0.00 7 0 S 300231 Glaciecola nitratireducens + 0.00 7 7 S1 1085623 Glaciecola nitratireducens FR1064 + 0.00 3 3 S 2489595 Glaciecola sp. THG-3.7 + 0.00 73 1 G 288793 Salinimonas + 0.00 23 23 S 2183582 Salinimonas sp. HMF8227 + 0.00 21 21 S 2303538 Salinimonas sp. N102 + 0.00 17 17 S 914153 Salinimonas lutimaris + 0.00 11 11 S 2572577 Salinimonas sp. KX18D6 + 0.00 54 0 G 1172191 Catenovulum + 0.00 54 54 S 2172099 Catenovulum sp. CCB-QB4 + 0.00 19 0 G 1621534 Paraglaciecola + 0.00 19 0 S 326544 Paraglaciecola psychrophila + 0.00 19 19 S1 1129794 Paraglaciecola psychrophila 170 + 0.00 11 0 G 1751872 Lacimicrobium + 0.00 11 11 S 1526571 Lacimicrobium alkaliphilum + 0.00 7 0 G 261825 Agarivorans + 0.00 7 7 S 680279 Agarivorans gilvus + 0.01 288 0 F 267889 Colwelliaceae + 0.01 173 1 G 28228 Colwellia + 0.00 56 0 S 28229 Colwellia psychrerythraea + 0.00 56 56 S1 167879 Colwellia psychrerythraea 34H + 0.00 40 40 S 2497879 Colwellia sp. Arc7-635 + 0.00 22 22 S 1816219 Colwellia sp. PAMC 21821 + 0.00 19 19 S 1816218 Colwellia sp. PAMC 20917 + 0.00 12 12 S 1967665 Colwellia beringensis + 0.00 12 12 S 2161872 Colwellia sp. Arc7-D + 0.00 11 11 S 58049 Colwellia sp. MT41 + 0.00 101 0 G 1518149 Thalassotalea + 0.00 92 92 S 1763536 Thalassotalea crassostreae + 0.00 9 9 S 2552945 Thalassotalea sp. HSM 43 + 0.00 14 0 G 1407056 Litorilituus + 0.00 14 14 S 718192 Litorilituus sediminis + 0.00 57 0 F 267894 Psychromonadaceae + 0.00 57 0 G 67572 Psychromonas + 0.00 35 35 S 314282 Psychromonas sp. CNPT3 + 0.00 22 0 S 357794 Psychromonas ingrahamii + 0.00 22 22 S1 357804 Psychromonas ingrahamii 37 + 0.00 54 0 F 267891 Moritellaceae + 0.00 54 0 G 58050 Moritella + 0.00 37 37 S 80854 Moritella viscosa + 0.00 17 17 S 69539 Moritella yayanosii + 0.00 44 0 F 267893 Idiomarinaceae + 0.00 30 0 F1 946227 unclassified Idiomarinaceae + 0.00 30 30 S 1298881 Idiomarinaceae bacterium HL-53 + 0.00 14 0 G 135575 Idiomarina + 0.00 9 9 S 2100422 Idiomarina sp. OT37-5b + 0.00 5 5 S 135577 Idiomarina loihiensis + 0.07 1706 0 O 135623 Vibrionales + 0.07 1706 33 F 641 Vibrionaceae + 0.05 1282 149 G 662 Vibrio + 0.01 357 33 G1 717610 Vibrio harveyi group + 0.00 96 96 S 670 Vibrio parahaemolyticus + 0.00 68 68 S 663 Vibrio alginolyticus + 0.00 44 12 G2 2315253 Vibrio diabolicus subgroup + 0.00 31 31 S 50719 Vibrio diabolicus + 0.00 1 1 S 150340 Vibrio antiquarius + 0.00 31 31 S 190895 Vibrio rotiferianus + 0.00 24 24 S 691 Vibrio natriegens + 0.00 24 24 S 696485 Vibrio owensii + 0.00 14 14 S 669 Vibrio harveyi + 0.00 12 10 S 680 Vibrio campbellii + 0.00 1 1 S1 338187 Vibrio campbellii ATCC BAA-1116 + 0.00 1 1 S1 1224742 Vibrio campbellii CAIM 519 = NBRC 15631 + 0.00 10 10 S 512649 Vibrio azureus + 0.00 1 0 S 766224 Vibrio jasicida + 0.00 1 1 S1 1280002 Vibrio jasicida 090810c + 0.01 136 136 S 687 Vibrio gazogenes + 0.00 87 86 S 666 Vibrio cholerae + 0.00 1 0 S1 127906 Vibrio cholerae O1 + 0.00 1 1 S2 593588 Vibrio cholerae MJ-1236 + 0.00 79 0 S 246167 Vibrio crassostreae + 0.00 79 79 S1 1191300 Vibrio crassostreae 9CS106 + 0.00 64 35 S 672 Vibrio vulnificus + 0.00 19 19 S1 748003 Vibrio vulnificus VVyb1(BT3) + 0.00 10 10 S1 196600 Vibrio vulnificus YJ016 + 0.00 63 0 S 52443 Vibrio tapetis + 0.00 63 63 S1 1671868 Vibrio tapetis subsp. tapetis + 0.00 62 62 S 689 Vibrio mediterranei + 0.00 47 47 S 1435069 Vibrio tritonius + 0.00 27 27 S 190893 Vibrio coralliilyticus + 0.00 26 26 S 47951 Vibrio cyclitrophicus + 0.00 25 25 S 76258 Vibrio rumoiensis + 0.00 22 22 S 55601 Vibrio anguillarum + 0.00 21 19 S 29494 Vibrio furnissii + 0.00 2 2 S1 903510 Vibrio furnissii NCTC 11218 + 0.00 20 20 S 29497 Vibrio splendidus + 0.00 17 17 S 673372 Vibrio casei + 0.00 15 15 S 2479546 Vibrio sp. HBUAS61001 + 0.00 15 15 S 45658 Vibrio scophthalmi + 0.00 10 10 S 553239 Vibrio breoganii + 0.00 8 0 G1 1891919 Vibrio oreintalis group + 0.00 8 0 S 29498 Vibrio tubiashii + 0.00 8 8 S1 1051646 Vibrio tubiashii ATCC 19109 + 0.00 6 6 S 28173 Vibrio nigripulchritudo + 0.00 6 6 S 676 Vibrio fluvialis + 0.00 6 6 S 1891186 Vibrio aphrogenes + 0.00 4 4 S 1074311 Vibrio alfacsensis + 0.00 2 0 S 212663 Vibrio tasmaniensis + 0.00 2 2 S1 575788 Vibrio tasmaniensis LGP32 + 0.00 2 2 S 170679 Vibrio chagasii + 0.00 2 2 S 2014742 Vibrio sp. 2521-89 + 0.00 2 2 S 2025808 Vibrio qinghaiensis + 0.00 2 2 S 674 Vibrio mimicus + 0.01 142 0 G 51366 Salinivibrio + 0.00 81 81 S 1908198 Salinivibrio kushneri + 0.00 61 61 S 2003370 Salinivibrio sp. YCSC6 + 0.00 120 0 G 511678 Aliivibrio + 0.00 104 43 S 668 Aliivibrio fischeri + 0.00 57 57 S1 312309 Aliivibrio fischeri ES114 + 0.00 3 3 S1 388396 Aliivibrio fischeri MJ11 + 0.00 1 1 S1 1088719 Aliivibrio fischeri SR5 + 0.00 9 9 S 40269 Aliivibrio salmonicida + 0.00 7 7 S 80852 Aliivibrio wodanis + 0.00 56 0 G 657 Photobacterium + 0.00 40 27 S 38293 Photobacterium damselae + 0.00 12 12 S1 38294 Photobacterium damselae subsp. piscicida + 0.00 1 1 S1 85581 Photobacterium damselae subsp. damselae + 0.00 8 0 S 74109 Photobacterium profundum + 0.00 8 8 S1 298386 Photobacterium profundum SS9 + 0.00 8 0 S 1295392 Photobacterium gaetbulicola + 0.00 8 8 S1 658445 Photobacterium gaetbulicola Gung47 + 0.00 44 0 G 188143 Enterovibrio + 0.00 44 44 S 1927128 Candidatus Enterovibrio luxaltus + 0.00 29 0 G 246861 Grimontia + 0.00 29 29 S 673 Grimontia hollisae + 0.04 1063 2 O 135619 Oceanospirillales + 0.02 410 0 F 28256 Halomonadaceae + 0.01 269 94 G 2745 Halomonas + 0.00 51 51 S 1504981 Halomonas sp. KO116 + 0.00 21 21 S 1761789 Halomonas sp. hl-4 + 0.00 16 16 S 1346287 Halomonas sp. A3H3 + 0.00 15 15 S 1883416 Halomonas sp. 1513 + 0.00 11 11 S 1971364 Halomonas sp. GT + 0.00 11 11 S 1178482 Halomonas huangheensis + 0.00 10 10 S 664683 Halomonas titanicae + 0.00 9 9 S 1118153 Halomonas sp. GFAJ-1 + 0.00 7 0 S 2746 Halomonas elongata + 0.00 7 7 S1 768066 Halomonas elongata DSM 2581 + 0.00 6 6 S 29571 Halomonas subglaciescola + 0.00 5 5 S 507626 Halomonas chromatireducens + 0.00 5 5 S 272774 Halomonas alkaliphila + 0.00 5 5 S 2136172 Halomonas sp. SF2003 + 0.00 2 2 S 1666906 Halomonas sp. HL-93 + 0.00 1 1 S 44935 Halomonas venusta + 0.01 134 0 F1 114403 Zymobacter group + 0.01 134 0 G 33073 Zymobacter + 0.01 134 134 S 33074 Zymobacter palmae + 0.00 5 0 G 504090 Kushneria + 0.00 4 4 S 698828 Kushneria konosiri + 0.00 1 1 S 157779 Kushneria marisflavi + 0.00 2 0 G 42054 Chromohalobacter + 0.00 2 0 S 158080 Chromohalobacter salexigens + 0.00 2 2 S1 290398 Chromohalobacter salexigens DSM 3043 + 0.01 312 1 F 135620 Oceanospirillaceae + 0.01 131 0 G 28253 Marinomonas + 0.00 50 0 S 936476 Marinomonas posidonica + 0.00 50 50 S1 491952 Marinomonas posidonica IVIA-Po-181 + 0.00 28 28 S 2071621 Marinomonas sp. FW-1 + 0.00 27 27 S 178399 Marinomonas primoryensis + 0.00 16 0 S 119864 Marinomonas mediterranea + 0.00 16 16 S1 717774 Marinomonas mediterranea MMB-1 + 0.00 10 10 S 400668 Marinomonas sp. MWYL1 + 0.00 80 0 G 188907 Oleispira + 0.00 80 0 S 188908 Oleispira antarctica + 0.00 80 80 S1 698738 Oleispira antarctica RB-8 + 0.00 64 0 G 187492 Thalassolituus + 0.00 64 61 S 187493 Thalassolituus oleivorans + 0.00 3 3 S1 1208320 Thalassolituus oleivorans R6-15 + 0.00 35 0 G 1537406 Bacterioplanes + 0.00 35 35 S 1249553 Bacterioplanes sanyensis + 0.00 1 0 G 48075 Marinobacterium + 0.00 1 1 S 1821621 Marinobacterium aestuarii + 0.01 127 0 F 224372 Alcanivoracaceae + 0.01 127 16 G 59753 Alcanivorax + 0.00 90 90 S 2014542 Alcanivorax sp. N3-2A + 0.00 19 0 S 285091 Alcanivorax dieselolei + 0.00 19 19 S1 930169 Alcanivorax dieselolei B5 + 0.00 1 0 S 59754 Alcanivorax borkumensis + 0.00 1 1 S1 393595 Alcanivorax borkumensis SK2 + 0.00 1 0 S 1306787 Alcanivorax pacificus + 0.00 1 1 S1 391936 Alcanivorax pacificus W11-5 + 0.00 102 0 F 1920240 Kangiellaceae + 0.00 102 0 G 261963 Kangiella + 0.00 34 34 S 1144748 Kangiella sediminilitoris + 0.00 27 0 S 261964 Kangiella koreensis + 0.00 27 27 S1 523791 Kangiella koreensis DSM 16069 + 0.00 27 27 S 914150 Kangiella geojedonensis + 0.00 14 14 S 1561924 Kangiella profundi + 0.00 40 0 F 224379 Hahellaceae + 0.00 40 0 G 158481 Hahella + 0.00 37 37 S 1628392 Hahella sp. KA22 + 0.00 3 0 S 158327 Hahella chejuensis + 0.00 3 3 S1 349521 Hahella chejuensis KCTC 2396 + 0.00 37 0 F 2066474 Endozoicomonadaceae + 0.00 37 0 G 305899 Endozoicomonas + 0.00 37 0 S 1027273 Endozoicomonas montiporae + 0.00 37 37 S1 570277 Endozoicomonas montiporae CL-33 + 0.00 31 0 F 255527 Saccharospirillaceae + 0.00 30 0 G 230494 Reinekea + 0.00 30 30 S 1336806 Reinekea forsetii + 0.00 1 0 G 1445504 Gynuella + 0.00 1 0 S 1445505 Gynuella sunshinyii + 0.00 1 1 S1 1445510 Gynuella sunshinyii YC6258 + 0.00 2 0 F 191033 Oleiphilaceae + 0.00 2 0 G 141450 Oleiphilus + 0.00 2 2 S 141451 Oleiphilus messinensis + 0.03 637 0 O 135625 Pasteurellales + 0.03 637 40 F 712 Pasteurellaceae + 0.01 137 24 G 724 Haemophilus + 0.00 47 47 S 730 [Haemophilus] ducreyi + 0.00 43 41 S 727 Haemophilus influenzae + 0.00 2 2 S1 262728 Haemophilus influenzae R2866 + 0.00 19 17 S 729 Haemophilus parainfluenzae + 0.00 2 2 S1 862965 Haemophilus parainfluenzae T3T1 + 0.00 3 3 S 726 Haemophilus haemolyticus + 0.00 1 1 S 249188 Haemophilus pittmaniae + 0.01 130 7 G 75984 Mannheimia + 0.00 71 65 S 85404 Mannheimia varigena + 0.00 3 3 S1 1433287 Mannheimia varigena USDA-ARS-USMARC-1296 + 0.00 3 3 S1 1434214 Mannheimia varigena USDA-ARS-USMARC-1312 + 0.00 37 37 S 75985 Mannheimia haemolytica + 0.00 15 15 S 1432056 Mannheimia sp. USDA-ARS-USMARC-1261 + 0.00 73 0 G 476528 Bibersteinia + 0.00 73 34 S 47735 Bibersteinia trehalosi + 0.00 39 39 S1 1263832 Bibersteinia trehalosi USDA-ARS-USMARC-190 + 0.00 55 9 G 713 Actinobacillus + 0.00 21 21 S 189834 Actinobacillus porcitonsillarum + 0.00 10 5 S 715 Actinobacillus pleuropneumoniae + 0.00 5 5 S1 754345 Actinobacillus pleuropneumoniae serovar 8 + 0.00 7 7 S 718 Actinobacillus equuli + 0.00 5 5 S 716 Actinobacillus suis + 0.00 3 3 S 51161 Actinobacillus delphinicola + 0.00 52 0 G 416916 Aggregatibacter + 0.00 36 36 S 714 Aggregatibacter actinomycetemcomitans + 0.00 14 10 S 732 Aggregatibacter aphrophilus + 0.00 3 3 S1 634176 Aggregatibacter aphrophilus NJ8700 + 0.00 1 1 S1 985008 Aggregatibacter aphrophilus ATCC 33389 + 0.00 2 0 S 739 Aggregatibacter segnis + 0.00 2 2 S1 888057 Aggregatibacter segnis ATCC 33393 + 0.00 42 2 G 745 Pasteurella + 0.00 37 31 S 747 Pasteurella multocida + 0.00 6 0 S1 44283 Pasteurella multocida subsp. multocida + 0.00 6 6 S2 1304873 Pasteurella multocida subsp. multocida OH4807 + 0.00 3 3 S 754 Pasteurella dagmatis + 0.00 35 0 G 2094023 Glaesserella + 0.00 33 33 S 738 Glaesserella parasuis + 0.00 2 2 S 2030797 Glaesserella sp. 15-184 + 0.00 33 0 F1 1524964 unclassified Pasteurellaceae + 0.00 24 0 F2 67757 unclassified Pasteurellaceae (miscellaneous) + 0.00 24 24 S 1679001 Pasteurellaceae bacterium NI1060 + 0.00 9 0 F2 310966 [Pasteurella] aerogenes-[Pasteurella] mairii-[Actinobacillus] rossii complex + 0.00 9 9 S 749 [Pasteurella] aerogenes + 0.00 16 0 G 214906 Histophilus + 0.00 16 16 S 731 Histophilus somni + 0.00 12 0 G 155493 Gallibacterium + 0.00 12 0 S 750 Gallibacterium anatis + 0.00 12 12 S1 1005058 Gallibacterium anatis UMN179 + 0.00 10 0 G 697331 Basfia + 0.00 10 0 S 157673 [Mannheimia] succiniciproducens + 0.00 10 10 S1 221988 [Mannheimia] succiniciproducens MBEL55E + 0.00 2 1 G 292486 Avibacterium + 0.00 1 1 S 762 Avibacterium volantium + 0.01 323 0 O 135624 Aeromonadales + 0.01 323 0 F 84642 Aeromonadaceae + 0.01 188 84 G 642 Aeromonas + 0.00 41 41 S 648 Aeromonas caviae + 0.00 32 32 S 645 Aeromonas salmonicida + 0.00 11 11 S 652 Aeromonas schubertii + 0.00 11 7 S 654 Aeromonas veronii + 0.00 4 4 S1 998088 Aeromonas veronii B565 + 0.00 3 3 S 948519 Aeromonas rivipollensis + 0.00 3 2 S 644 Aeromonas hydrophila + 0.00 1 1 S1 1354302 Aeromonas hydrophila 4AK4 + 0.00 1 1 S 1636608 Aeromonas sp. ASNIH3 + 0.00 1 1 S 2033032 Aeromonas sp. CA23 + 0.00 1 1 S 2033033 Aeromonas sp. CU5 + 0.01 123 0 G 225143 Oceanisphaera + 0.00 97 97 S 1903694 Oceanisphaera avium + 0.00 26 26 S 1416627 Oceanisphaera profunda + 0.00 5 0 G 43947 Tolumonas + 0.00 5 0 S 43948 Tolumonas auensis + 0.00 5 5 S1 595494 Tolumonas auensis DSM 9187 + 0.00 4 0 G 129577 Oceanimonas + 0.00 4 4 S 511062 Oceanimonas sp. GK1 + 0.00 3 0 G 347533 Zobellella + 0.00 3 3 S 347534 Zobellella denitrificans + 0.01 237 0 O 72273 Thiotrichales + 0.01 189 5 F 135616 Piscirickettsiaceae + 0.00 60 0 G 40222 Methylophaga + 0.00 53 53 S 754476 Methylophaga nitratireducenticrescens + 0.00 7 7 S 754477 Methylophaga frappieri + 0.00 46 0 G 933 Thiomicrospira + 0.00 23 0 S 147268 Thiomicrospira cyclica + 0.00 23 23 S1 717773 Thiomicrospira cyclica ALM1 + 0.00 20 0 S 92245 Thiomicrospira aerophila + 0.00 20 20 S1 717772 Thiomicrospira aerophila AL3 + 0.00 3 3 S 1803865 Thiomicrospira sp. S5 + 0.00 32 0 G 28884 Hydrogenovibrio + 0.00 25 25 S 39765 Hydrogenovibrio crunogenus + 0.00 7 7 S 265883 Hydrogenovibrio thermophilus + 0.00 23 0 G 2039723 Thiomicrorhabdus + 0.00 13 13 S 2580412 Thiomicrorhabdus sp. G1 + 0.00 6 6 S 2267253 Thiomicrorhabdus sp. 13-15A + 0.00 4 4 S 2211106 Thiomicrorhabdus aquaedulcis + 0.00 18 10 G 34067 Cycloclasticus + 0.00 6 0 S 1329899 Cycloclasticus zancles + 0.00 6 6 S1 1198232 Cycloclasticus zancles 78-ME + 0.00 2 2 S 728003 Cycloclasticus sp. PY97N + 0.00 5 0 G 1237 Piscirickettsia + 0.00 5 5 S 1238 Piscirickettsia salmonis + 0.00 38 0 F 34064 Francisellaceae + 0.00 29 6 G 262 Francisella + 0.00 12 12 S 1542390 Francisella sp. CA97-1460 + 0.00 4 0 S 954 Francisella persica + 0.00 4 4 S1 1086726 Francisella persica ATCC VR-331 + 0.00 3 0 S 28110 Francisella philomiragia + 0.00 3 3 S1 539329 Francisella philomiragia subsp. philomiragia ATCC 25015 + 0.00 1 0 S 263 Francisella tularensis + 0.00 1 0 S1 264 Francisella tularensis subsp. novicida + 0.00 1 1 S2 1386968 Francisella tularensis subsp. novicida PA10-7858 + 0.00 1 1 S 549298 Francisella halioticida + 0.00 1 1 S 573570 Francisella sp. TX077310 + 0.00 1 1 S 1547445 Francisella sp. FSC1006 + 0.00 9 0 G 1869285 Allofrancisella + 0.00 9 9 S 594679 Allofrancisella guangzhouensis + 0.00 10 0 F 135617 Thiotrichaceae + 0.00 10 0 G 1021 Beggiatoa + 0.00 10 10 S 288004 Beggiatoa leptomitoformis + 0.01 236 0 O 1706369 Cellvibrionales + 0.01 143 0 F 1706371 Cellvibrionaceae + 0.00 64 0 G 316625 Saccharophagus + 0.00 64 0 S 86304 Saccharophagus degradans + 0.00 64 64 S1 203122 Saccharophagus degradans 2-40 + 0.00 38 0 G 2036021 Agarilytica + 0.00 38 38 S 1737490 Agarilytica rhodophyticola + 0.00 28 0 G 10 Cellvibrio + 0.00 14 0 S 155077 Cellvibrio japonicus + 0.00 14 14 S1 498211 Cellvibrio japonicus Ueda107 + 0.00 11 11 S 1945512 Cellvibrio sp. PSBB023 + 0.00 3 3 S 1987723 Cellvibrio sp. PSBB006 + 0.00 13 0 G 2425 Teredinibacter + 0.00 13 0 S 2426 Teredinibacter turnerae + 0.00 13 13 S1 377629 Teredinibacter turnerae T7901 + 0.00 45 0 F 1706375 Spongiibacteraceae + 0.00 22 0 G 630749 Spongiibacter + 0.00 22 22 S 1620392 Spongiibacter sp. IMCC21906 + 0.00 12 0 G 1084558 Oceanicoccus + 0.00 12 12 S 716816 Oceanicoccus sagamiensis + 0.00 11 0 G 1434050 Zhongshania + 0.00 11 11 S 1470434 Zhongshania aliphaticivorans + 0.00 25 0 F 1706373 Microbulbiferaceae + 0.00 25 0 G 48073 Microbulbifer + 0.00 11 11 S 260552 Microbulbifer agarilyticus + 0.00 6 6 S 252514 Microbulbifer thermotolerans + 0.00 5 5 S 359370 Microbulbifer sp. A4B17 + 0.00 3 3 S 1769779 Microbulbifer aggregans + 0.00 23 0 F 1706372 Halieaceae + 0.00 22 0 G 1217416 Halioglobus + 0.00 16 16 S 930806 Halioglobus pacificus + 0.00 6 6 S 930805 Halioglobus japonicus + 0.00 1 0 G 393661 Congregibacter + 0.00 1 0 S 393662 Congregibacter litoralis + 0.00 1 1 S1 314285 Congregibacter litoralis KT71 + 0.01 223 0 O 135613 Chromatiales + 0.01 139 0 F 1046 Chromatiaceae + 0.00 103 0 G 67575 Rheinheimera + 0.00 70 70 S 2498451 Rheinheimera sp. LHK132 + 0.00 33 33 S 2545632 Rheinheimera sp. D18 + 0.00 11 9 G 1227 Nitrosococcus + 0.00 1 0 S 473531 Nitrosococcus watsonii + 0.00 1 1 S1 105559 Nitrosococcus watsonii C-113 + 0.00 1 1 S 1814290 Nitrosococcus wardiae + 0.00 11 0 G 85076 Marichromatium + 0.00 11 0 S 37487 Marichromatium purpuratum + 0.00 11 11 S1 765910 Marichromatium purpuratum 984 + 0.00 7 0 G 1980513 Candidatus Nitrosoglobus + 0.00 7 7 S 1630141 Candidatus Nitrosoglobus terrae + 0.00 4 0 G 156885 Thioflavicoccus + 0.00 4 0 S 80679 Thioflavicoccus mobilis + 0.00 4 4 S1 765912 Thioflavicoccus mobilis 8321 + 0.00 3 0 G 53392 Thiodictyon + 0.00 3 3 S 1166950 Candidatus Thiodictyon syntrophicum + 0.00 70 0 F 72276 Ectothiorhodospiraceae + 0.00 60 0 G 1765964 Acidihalobacter + 0.00 40 40 S 160660 Acidihalobacter prosperus + 0.00 20 20 S 1765967 Acidihalobacter ferrooxidans + 0.00 7 0 G 1335745 Spiribacter + 0.00 4 4 S 1335757 Spiribacter curvatus + 0.00 3 0 S 1335746 Spiribacter salinus + 0.00 3 3 S1 1260251 Spiribacter salinus M19-40 + 0.00 2 0 G 106633 Thioalkalivibrio + 0.00 2 2 S 106634 Thioalkalivibrio versutus + 0.00 1 0 G 85108 Halorhodospira + 0.00 1 1 S 1052 Halorhodospira halochloris + 0.00 11 0 F 449719 Granulosicoccaceae + 0.00 8 0 G 1860077 Sulfuriflexus + 0.00 8 8 S 1811807 Sulfuriflexus mobilis + 0.00 3 0 G 437504 Granulosicoccus + 0.00 3 0 S 437505 Granulosicoccus antarcticus + 0.00 3 3 S1 1192854 Granulosicoccus antarcticus IMCC3135 + 0.00 2 0 F 255526 Halothiobacillaceae + 0.00 2 0 G 109262 Halothiobacillus + 0.00 2 0 S 927 Halothiobacillus neapolitanus + 0.00 2 2 S1 555778 Halothiobacillus neapolitanus c2 + 0.00 1 0 F 1738654 Woeseiaceae + 0.00 1 0 G 1738655 Woeseia + 0.00 1 1 S 1548547 Woeseia oceani + 0.01 220 0 O 135614 Xanthomonadales + 0.01 217 0 F 32033 Xanthomonadaceae + 0.01 156 21 G 338 Xanthomonas + 0.00 66 3 S 347 Xanthomonas oryzae + 0.00 63 63 S1 64187 Xanthomonas oryzae pv. oryzae + 0.00 26 0 S 29447 Xanthomonas albilineans + 0.00 26 26 S1 380358 Xanthomonas albilineans GPE PC73 + 0.00 24 0 S 339 Xanthomonas campestris + 0.00 23 23 S1 340 Xanthomonas campestris pv. campestris + 0.00 1 0 S1 359385 Xanthomonas campestris pv. raphani + 0.00 1 1 S2 990315 Xanthomonas campestris pv. raphani 756C + 0.00 7 7 S 48664 Xanthomonas fragariae + 0.00 3 0 S 1985254 Xanthomonas phaseoli + 0.00 3 0 S1 92828 Xanthomonas phaseoli pv. dieffenbachiae + 0.00 3 3 S2 1437877 Xanthomonas phaseoli pv. dieffenbachiae LMG 695 + 0.00 3 2 S 56454 Xanthomonas hortorum + 0.00 1 0 S1 487904 Xanthomonas hortorum pv. carotae + 0.00 1 1 S2 863365 Xanthomonas hortorum pv. carotae str. M081 + 0.00 3 3 S 56460 Xanthomonas vesicatoria + 0.00 1 0 G1 643453 Xanthomonas citri group + 0.00 1 1 S 346 Xanthomonas citri + 0.00 1 0 S 56450 Xanthomonas cassavae + 0.00 1 1 S1 1219375 Xanthomonas cassavae CFBP 4642 + 0.00 1 0 S 456327 Xanthomonas euvesicatoria + 0.00 1 0 S1 359387 Xanthomonas euvesicatoria pv. alfalfae + 0.00 1 1 S2 1365647 Xanthomonas euvesicatoria pv. alfalfae CFBP 3836 + 0.00 34 2 G 40323 Stenotrophomonas + 0.00 31 2 G1 995085 Stenotrophomonas maltophilia group + 0.00 29 28 S 40324 Stenotrophomonas maltophilia + 0.00 1 1 S1 1163399 Stenotrophomonas maltophilia D457 + 0.00 1 1 S 1904944 Stenotrophomonas sp. LM091 + 0.00 20 1 G 68 Lysobacter + 0.00 12 12 S 69 Lysobacter enzymogenes + 0.00 5 5 S 435897 Lysobacter capsici + 0.00 1 1 S 84531 Lysobacter antibioticus + 0.00 1 1 S 262324 Lysobacter gummosus + 0.00 5 0 G 83614 Luteimonas + 0.00 4 4 S 1896164 Luteimonas sp. JM171 + 0.00 1 1 S 2565782 Luteimonas sp. S-1072 + 0.00 2 0 G 83618 Pseudoxanthomonas + 0.00 1 0 S 314722 Pseudoxanthomonas suwonensis + 0.00 1 1 S1 743721 Pseudoxanthomonas suwonensis 11-1 + 0.00 1 0 S 415229 Pseudoxanthomonas spadix + 0.00 1 1 S1 1045855 Pseudoxanthomonas spadix BD-a59 + 0.00 3 0 F 1775411 Rhodanobacteraceae + 0.00 2 0 G 323413 Dokdonella + 0.00 2 0 S 323415 Dokdonella koreensis + 0.00 2 2 S1 1300342 Dokdonella koreensis DS-123 + 0.00 1 0 G 2233801 Ahniella + 0.00 1 1 S 2021234 Ahniella affigens + 0.01 198 0 O 118969 Legionellales + 0.01 183 1 F 444 Legionellaceae + 0.01 152 0 G 445 Legionella + 0.00 34 0 S 29423 Legionella oakridgensis + 0.00 34 34 S1 1268635 Legionella oakridgensis ATCC 33761 = DSM 21215 + 0.00 31 10 S 446 Legionella pneumophila + 0.00 21 21 S1 91891 Legionella pneumophila subsp. pneumophila + 0.00 24 24 S 45067 Legionella lansingensis + 0.00 23 23 S 456 Legionella jordanis + 0.00 14 14 S 452 Legionella spiritensis + 0.00 9 9 S 450 Legionella longbeachae + 0.00 9 0 S 96230 Legionella fallonii + 0.00 9 9 S1 1212491 Legionella fallonii LLAP-10 + 0.00 3 3 S 449 Legionella hackeliae + 0.00 2 2 S 1867846 Legionella clemsonensis + 0.00 1 1 S 454 Legionella israelensis + 0.00 1 1 S 28082 Legionella anisa + 0.00 1 1 S 28084 Legionella cherrii + 0.00 28 0 G 465 Tatlockia + 0.00 28 28 S 451 Tatlockia micdadei + 0.00 2 0 G 461 Fluoribacter + 0.00 2 2 S 463 Fluoribacter dumoffii + 0.00 15 0 F 118968 Coxiellaceae + 0.00 8 0 G 59195 Rickettsiella + 0.00 8 8 S 676208 Candidatus Rickettsiella viridis + 0.00 7 0 G 776 Coxiella + 0.00 7 7 S 777 Coxiella burnetii + 0.01 155 0 O 135618 Methylococcales + 0.01 155 0 F 403 Methylococcaceae + 0.00 74 37 G 416 Methylomonas + 0.00 22 22 S 1727196 Methylomonas sp. DH-1 + 0.00 9 9 S 1538553 Methylomonas denitrificans + 0.00 6 6 S 107637 Methylomonas sp. LW13 + 0.00 42 0 G 762296 Methylovulum + 0.00 42 42 S 1704499 Methylovulum psychrotolerans + 0.00 35 10 G 39773 Methylomicrobium + 0.00 14 0 S 271065 Methylomicrobium alcaliphilum + 0.00 14 14 S1 1091494 Methylomicrobium alcaliphilum 20Z + 0.00 10 10 S 2049332 Methylomicrobium sp. wino1 + 0.00 1 1 S 95641 Methylomicrobium buryatense + 0.00 4 0 G 413 Methylococcus + 0.00 4 0 S 414 Methylococcus capsulatus + 0.00 4 4 S1 243233 Methylococcus capsulatus str. Bath + 0.01 149 0 C1 118884 unclassified Gammaproteobacteria + 0.00 68 0 C2 33811 unclassified Gammaproteobacteria (miscellaneous) + 0.00 48 48 S 83406 gamma proteobacterium HdN1 + 0.00 10 10 S 2070539 Gammaproteobacteria bacterium ESL0073 + 0.00 9 9 S 2259620 Gammaproteobacteria bacterium soil36-7 + 0.00 1 1 S 1248727 endosymbiont of unidentified scaly snail isolate Monju + 0.00 58 0 G 655184 Candidatus Thioglobus + 0.00 44 38 S 1427364 Candidatus Thioglobus singularis + 0.00 6 6 S1 1125411 Candidatus Thioglobus singularis PS1 + 0.00 14 14 S 1705394 Candidatus Thioglobus autotrophicus + 0.00 11 0 C2 32036 sulfur-oxidizing symbionts + 0.00 7 0 S 410330 Calyptogena okutanii thioautotrophic gill symbiont + 0.00 7 7 S1 412965 Candidatus Vesicomyosocius okutanii HA + 0.00 3 0 S 113267 Bathymodiolus septemdierum thioautotrophic gill symbiont + 0.00 3 3 S1 1303921 endosymbiont of Bathymodiolus septemdierum str. Myojin knoll + 0.00 1 1 S 2360 Bathymodiolus thermophilus thioautotrophic gill symbiont + 0.00 6 0 G 745410 Gallaecimonas + 0.00 6 6 S 2291597 Gallaecimonas sp. HK-28 + 0.00 5 0 G 1524249 Pseudohongiella + 0.00 5 5 S 1249552 Pseudohongiella spirulinae + 0.00 1 0 C2 198346 Candidatus Baumannia + 0.00 1 1 S 186490 Candidatus Baumannia cicadellinicola + 0.00 74 0 O 1240482 Orbales + 0.00 74 0 F 1240483 Orbaceae + 0.00 74 0 G 1193503 Gilliamella + 0.00 74 74 S 1196095 Gilliamella apicola + 0.00 4 0 O 135615 Cardiobacteriales + 0.00 4 0 F 868 Cardiobacteriaceae + 0.00 4 0 G 869 Dichelobacter + 0.00 4 4 S 870 Dichelobacter nodosus + 0.00 1 0 O 742030 Salinisphaerales + 0.00 1 0 F 742031 Salinisphaeraceae + 0.00 1 0 G 180541 Salinisphaera + 0.00 1 1 S 2183911 Salinisphaera sp. LB1 + 0.00 1 0 O 1775403 Nevskiales + 0.00 1 0 F 568386 Sinobacteraceae + 0.00 1 0 G 413435 Solimonas + 0.00 1 1 S 2303331 Solimonas sp. K1W22B-7 + 0.13 3123 5 C 28216 Betaproteobacteria + 0.06 1476 0 O 206351 Neisseriales + 0.03 743 6 F 481 Neisseriaceae + 0.02 525 67 G 482 Neisseria + 0.00 83 83 S 28091 Neisseria weaveri + 0.00 51 51 S 1853276 Neisseria sp. 10022 + 0.00 40 40 S 326522 Neisseria animaloris + 0.00 40 39 S 495 Neisseria elongata + 0.00 1 1 S1 88719 Neisseria elongata subsp. glycolytica + 0.00 31 31 S 483 Neisseria cinerea + 0.00 30 30 S 326523 Neisseria zoodegmatis + 0.00 30 30 S 488 Neisseria mucosa + 0.00 30 30 S 492 Neisseria animalis + 0.00 23 23 S 484 Neisseria flavescens + 0.00 22 22 S 487 Neisseria meningitidis + 0.00 17 17 S 490 Neisseria sicca + 0.00 16 16 S 28449 Neisseria subflava + 0.00 15 15 S 493 Neisseria canis + 0.00 12 12 S 485 Neisseria gonorrhoeae + 0.00 8 8 S 1853278 Neisseria sp. 10023 + 0.00 6 0 S 486 Neisseria lactamica + 0.00 6 6 S1 489653 Neisseria lactamica 020-06 + 0.00 2 0 S 641148 Neisseria sp. oral taxon 014 + 0.00 2 2 S1 641149 Neisseria sp. oral taxon 014 str. F0314 + 0.00 2 2 S 655307 Neisseria sp. KEM232 + 0.00 115 0 G 59 Vitreoscilla + 0.00 114 114 S 96942 Vitreoscilla sp. C1 + 0.00 1 1 S 63 Vitreoscilla filiformis + 0.00 39 0 G 538 Eikenella + 0.00 39 39 S 539 Eikenella corrodens + 0.00 20 0 G 71 Simonsiella + 0.00 20 0 S 72 Simonsiella muelleri + 0.00 20 20 S1 641147 Simonsiella muelleri ATCC 29453 + 0.00 20 0 G 32257 Kingella + 0.00 20 20 S 504 Kingella kingae + 0.00 14 0 F1 421605 unclassified Neisseriaceae + 0.00 14 14 S 2052837 Neisseriaceae bacterium DSM 100970 + 0.00 4 0 G 1193515 Snodgrassella + 0.00 4 0 S 1196083 Snodgrassella alvi + 0.00 4 4 S1 1196094 Snodgrassella alvi wkB2 + 0.03 733 0 F 1499392 Chromobacteriaceae + 0.03 667 0 F1 90153 Chromobacterium group + 0.03 657 0 G 535 Chromobacterium + 0.03 657 0 S 536 Chromobacterium violaceum + 0.03 657 657 S1 243365 Chromobacterium violaceum ATCC 12472 + 0.00 10 0 G 32014 Iodobacter + 0.00 10 10 S 2496266 Iodobacter sp. H11R3 + 0.00 47 0 G 407217 Aquitalea + 0.00 35 35 S 1590041 Aquitalea sp. USM4 + 0.00 6 6 S 332411 Aquitalea magnusonii + 0.00 6 6 S 1537400 Aquitalea sp. THG-DN7.12 + 0.00 16 0 G 568394 Pseudogulbenkiania + 0.00 16 16 S 748280 Pseudogulbenkiania sp. NH8B + 0.00 1 0 G 187 Aquaspirillum + 0.00 1 1 S 1938604 Aquaspirillum sp. LM1 + 0.00 1 0 G 168470 Laribacter + 0.00 1 1 S 168471 Laribacter hongkongensis + 0.00 1 0 G 885864 Jeongeupia + 0.00 1 1 S 1906741 Jeongeupia sp. USM3 + 0.05 1315 40 O 80840 Burkholderiales + 0.03 626 10 F 119060 Burkholderiaceae + 0.01 163 9 G 44013 Polynucleobacter + 0.00 107 107 S 576610 Polynucleobacter necessarius + 0.00 31 31 S 556054 Polynucleobacter difficilis + 0.00 6 6 S 1743168 Polynucleobacter wuianus + 0.00 5 5 S 1835254 Polynucleobacter duraquae + 0.00 3 3 S 576611 Polynucleobacter asymbioticus + 0.00 2 2 S 2527775 Polynucleobacter paneuropaeus + 0.01 159 6 G 32008 Burkholderia + 0.00 85 4 G1 87882 Burkholderia cepacia complex + 0.00 58 58 S 95486 Burkholderia cenocepacia + 0.00 11 11 S 1503054 Burkholderia stagnalis + 0.00 5 5 S 101571 Burkholderia ubonensis + 0.00 2 2 S 1637853 Burkholderia sp. NRF60-BP8 + 0.00 1 1 S 60550 Burkholderia pyrrocinia + 0.00 1 1 S 60552 Burkholderia vietnamiensis + 0.00 1 1 S 87883 Burkholderia multivorans + 0.00 1 1 S 1503055 Burkholderia territorii + 0.00 1 1 S 265293 [Pseudomonas] mesoacidophila + 0.00 64 48 G1 111527 pseudomallei group + 0.00 16 1 S 28450 Burkholderia pseudomallei + 0.00 15 15 S1 331978 Burkholderia pseudomallei Pasteur 52237 + 0.00 2 2 S 1804984 Burkholderia sp. OLGA172 + 0.00 1 1 S 640512 Burkholderia sp. CCGE1003 + 0.00 1 1 S 1795043 Burkholderia sp. PAMC 26561 + 0.00 118 37 G 1822464 Paraburkholderia + 0.00 39 39 S 75105 Paraburkholderia caribensis + 0.00 23 23 S 134536 Paraburkholderia caledonica + 0.00 6 6 S 2547399 Paraburkholderia sp. 7MH5 + 0.00 6 6 S 640511 Paraburkholderia sp. CCGE1002 + 0.00 5 5 S 311230 Paraburkholderia terrae + 0.00 1 1 S 1926494 Paraburkholderia sp. SOS3 + 0.00 1 0 S 948107 Paraburkholderia sprentiae + 0.00 1 1 S1 754502 Paraburkholderia sprentiae WSM5005 + 0.00 71 2 G 106589 Cupriavidus + 0.00 43 43 S 68895 Cupriavidus basilensis + 0.00 16 0 S 119219 Cupriavidus metallidurans + 0.00 16 16 S1 266264 Cupriavidus metallidurans CH34 + 0.00 4 4 S 164546 Cupriavidus taiwanensis + 0.00 4 0 S 248026 Cupriavidus pinatubonensis + 0.00 4 4 S1 264198 Cupriavidus pinatubonensis JMP134 + 0.00 1 0 S 106590 Cupriavidus necator + 0.00 1 1 S1 1042878 Cupriavidus necator N-1 + 0.00 1 1 S 876364 Cupriavidus sp. USMAA2-4 + 0.00 67 3 G 48736 Ralstonia + 0.00 38 37 S 305 Ralstonia solanacearum + 0.00 1 1 S1 859655 Ralstonia solanacearum CMR15 + 0.00 24 24 S 190721 Ralstonia insidiosa + 0.00 1 0 S 329 Ralstonia pickettii + 0.00 1 1 S1 402626 Ralstonia pickettii 12J + 0.00 1 0 G1 209769 unclassified Ralstonia + 0.00 1 1 S 1944648 blood disease bacterium A2-HR MARDI + 0.00 22 0 G 1910924 Hydromonas + 0.00 22 22 S 2268024 Hydromonas sp. F02 + 0.00 7 0 G 93217 Pandoraea + 0.00 4 4 S 656179 Pandoraea faecigallinarum + 0.00 1 1 S 93219 Pandoraea norimbergensis + 0.00 1 1 S 445709 Pandoraea thiooxydans + 0.00 1 1 S 656178 Pandoraea vervacti + 0.00 6 0 G 47670 Lautropia + 0.00 6 6 S 47671 Lautropia mirabilis + 0.00 3 0 G 1810868 Mycoavidus + 0.00 3 3 S 1553431 Mycoavidus cysteinexigens + 0.01 291 1 F 506 Alcaligenaceae + 0.00 104 1 G 517 Bordetella + 0.00 37 37 S 1416803 Bordetella genomosp. 9 + 0.00 34 34 S 463040 Bordetella genomosp. 13 + 0.00 15 15 S 520 Bordetella pertussis + 0.00 11 11 S 123899 Bordetella trematum + 0.00 3 3 S 2163011 Bordetella sp. HZ20 + 0.00 2 2 S 1416806 Bordetella genomosp. 8 + 0.00 1 1 S 1697043 Bordetella sp. H567 + 0.00 63 0 G 90243 Oligella + 0.00 63 63 S 90245 Oligella urethralis + 0.00 46 44 G 222 Achromobacter + 0.00 1 1 S 85698 Achromobacter xylosoxidans + 0.00 1 1 S 1881016 Achromobacter sp. MFA1 R4 + 0.00 28 0 G 1100891 Paenalcaligenes + 0.00 28 28 S 643674 Paenalcaligenes hominis + 0.00 24 0 G 257820 Kerstersia + 0.00 24 24 S 206506 Kerstersia gyiorum + 0.00 14 0 G 305976 Pusillimonas + 0.00 9 9 S 2028345 Pusillimonas sp. ye3 + 0.00 5 5 S 1007105 Pusillimonas sp. T7-7 + 0.00 4 0 G 1472344 Basilea + 0.00 4 0 S 1472345 Basilea psittacipulmonis + 0.00 4 4 S1 1072685 Basilea psittacipulmonis DSM 24701 + 0.00 3 0 G 29574 Taylorella + 0.00 2 0 S 84590 Taylorella asinigenitalis + 0.00 2 2 S1 1008459 Taylorella asinigenitalis MCE3 + 0.00 1 1 S 29575 Taylorella equigenitalis + 0.00 3 0 G 290425 Advenella + 0.00 2 0 S 302406 Advenella mimigardefordensis + 0.00 2 2 S1 1247726 Advenella mimigardefordensis DPN7 + 0.00 1 0 S 310575 Advenella kashmirensis + 0.00 1 1 S1 1036672 Advenella kashmirensis WT001 + 0.00 1 0 G 507 Alcaligenes + 0.00 1 1 S 511 Alcaligenes faecalis + 0.01 176 13 F 75682 Oxalobacteraceae + 0.00 44 1 G 149698 Massilia + 0.00 25 25 S 2045208 Massilia violaceinigra + 0.00 8 8 S 1678028 Massilia sp. NR 4-1 + 0.00 7 7 S 321983 Massilia albidiflava + 0.00 2 2 S 864828 Massilia umbonata + 0.00 1 1 S 2072590 Massilia armeniaca + 0.00 39 0 G 303379 Herminiimonas + 0.00 38 38 S 1809410 Herminiimonas arsenitoxidans + 0.00 1 1 S 204773 Herminiimonas arsenicoxydans + 0.00 36 7 G 29580 Janthinobacterium + 0.00 9 9 S 1236179 Janthinobacterium sp. B9-8 + 0.00 6 6 S 368607 Janthinobacterium svalbardensis + 0.00 5 5 S 1644131 Janthinobacterium sp. 1_2014MBL_MicDiv + 0.00 3 1 S 55508 Janthinobacterium agaricidamnosum + 0.00 2 2 S1 1349767 Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628 + 0.00 3 3 S 375286 Janthinobacterium sp. Marseille + 0.00 3 3 S 2497863 Janthinobacterium sp. 17J80-10 + 0.00 14 0 G 401469 Undibacterium + 0.00 14 14 S 401471 Undibacterium parvum + 0.00 13 0 G 202907 Collimonas + 0.00 10 10 S 279113 Collimonas pratensis + 0.00 3 3 S 279058 Collimonas arenae + 0.00 11 0 G 846 Oxalobacter + 0.00 11 11 S 847 Oxalobacter formigenes + 0.00 6 0 G 963 Herbaspirillum + 0.00 4 4 S 2025949 Herbaspirillum sp. meg3 + 0.00 1 0 S 341045 Herbaspirillum hiltneri + 0.00 1 1 S1 1262470 Herbaspirillum hiltneri N3 + 0.00 1 1 S 2014887 Herbaspirillum robiniae + 0.01 128 1 F 80864 Comamonadaceae + 0.00 61 0 G 80865 Delftia + 0.00 61 61 S 180282 Delftia tsuruhatensis + 0.00 23 0 G 665874 Limnohabitans + 0.00 14 14 S 1678128 Limnohabitans sp. 63ED37-2 + 0.00 9 9 S 1678129 Limnohabitans sp. 103DPR2 + 0.00 11 0 G 28065 Rhodoferax + 0.00 6 6 S 1842727 Rhodoferax koreense + 0.00 5 5 S 81479 Rhodoferax antarcticus + 0.00 10 0 G 12916 Acidovorax + 0.00 5 5 S 2478662 Acidovorax sp. 1608163 + 0.00 2 0 S 80867 Acidovorax avenae + 0.00 2 2 S1 80870 Acidovorax avenae subsp. avenae + 0.00 2 2 S 232721 Acidovorax sp. JS42 + 0.00 1 1 S 553814 Acidovorax carolinensis + 0.00 9 0 G 52972 Polaromonas + 0.00 6 0 S 216465 Polaromonas naphthalenivorans + 0.00 6 6 S1 365044 Polaromonas naphthalenivorans CJ2 + 0.00 3 3 S 296591 Polaromonas sp. JS666 + 0.00 4 0 G 34072 Variovorax + 0.00 3 3 S 1795631 Variovorax sp. PAMC 28711 + 0.00 1 1 S 1034889 Variovorax sp. HW608 + 0.00 3 0 G 47420 Hydrogenophaga + 0.00 1 1 S 47421 Hydrogenophaga pseudoflava + 0.00 1 1 S 795665 Hydrogenophaga sp. PBC + 0.00 1 1 S 2184519 Hydrogenophaga sp. NH-16 + 0.00 2 0 G 283 Comamonas + 0.00 1 0 S 285 Comamonas testosteroni + 0.00 1 1 S1 1392005 Comamonas testosteroni TK102 + 0.00 1 1 S 363952 Comamonas thiooxydans + 0.00 2 0 G 1436289 Candidatus Symbiobacter + 0.00 2 0 S 1436290 Candidatus Symbiobacter mobilis + 0.00 2 2 S1 946483 Candidatus Symbiobacter mobilis CR + 0.00 2 0 G 232523 Hylemonella + 0.00 2 2 S 80880 Hylemonella gracilis + 0.00 54 0 O1 119065 unclassified Burkholderiales + 0.00 53 1 O2 224471 Burkholderiales Genera incertae sedis + 0.00 27 0 G 93681 Roseateles + 0.00 27 27 S 76731 Roseateles depolymerans + 0.00 8 0 G 318147 Paucibacter + 0.00 8 8 S 1768242 Paucibacter sp. KCTC 42545 + 0.00 7 0 G 644355 Inhella + 0.00 7 7 S 392593 Inhella inkyongensis + 0.00 5 0 G 32012 Thiomonas + 0.00 5 5 S 926 Thiomonas intermedia + 0.00 2 0 G 88 Leptothrix + 0.00 2 0 S 34029 Leptothrix cholodnii + 0.00 2 2 S1 395495 Leptothrix cholodnii SP-6 + 0.00 1 0 G 28067 Rubrivivax + 0.00 1 0 S 28068 Rubrivivax gelatinosus + 0.00 1 1 S1 983917 Rubrivivax gelatinosus IL144 + 0.00 1 0 G 212743 Rhizobacter + 0.00 1 1 S 946333 Rhizobacter gummiphilus + 0.00 1 1 G 316612 Methylibium + 0.00 1 1 S 413882 [Polyangium] brachysporum + 0.01 296 1 O 32003 Nitrosomonadales + 0.01 149 0 F 206379 Nitrosomonadaceae + 0.01 148 0 G 914 Nitrosomonas + 0.00 80 80 S 44577 Nitrosomonas ureae + 0.00 41 41 S 153948 Nitrosomonas sp. AL212 + 0.00 24 0 S 915 Nitrosomonas europaea + 0.00 24 24 S1 228410 Nitrosomonas europaea ATCC 19718 + 0.00 2 2 S 44574 Nitrosomonas communis + 0.00 1 0 S 916 Nitrosomonas eutropha + 0.00 1 1 S1 335283 Nitrosomonas eutropha C91 + 0.00 1 0 G 35798 Nitrosospira + 0.00 1 1 S 1288494 Nitrosospira lacus + 0.00 117 0 F 32011 Methylophilaceae + 0.00 45 0 G 1679002 Candidatus Methylopumilus + 0.00 26 26 S 2588536 Candidatus Methylopumilus universalis + 0.00 10 10 S 1581557 Candidatus Methylopumilus planktonicus + 0.00 9 9 S 1581680 Candidatus Methylopumilus turicensis + 0.00 22 0 G 404 Methylobacillus + 0.00 22 0 S 405 Methylobacillus flagellatus + 0.00 22 22 S1 265072 Methylobacillus flagellatus KT + 0.00 22 0 G 359407 Methylotenera + 0.00 18 0 S 359408 Methylotenera mobilis + 0.00 18 18 S1 583345 Methylotenera mobilis JLW8 + 0.00 4 0 S 1055487 Methylotenera versatilis + 0.00 4 4 S1 666681 Methylotenera versatilis 301 + 0.00 19 1 G 16 Methylophilus + 0.00 17 17 S 2588534 Methylophilus medardicus + 0.00 1 1 S 1662285 Methylophilus sp. TWE2 + 0.00 7 0 F1 119067 unclassified Methylophilaceae + 0.00 7 7 S 417 Methylomonas clara + 0.00 2 0 G 81682 Methylovorus + 0.00 2 0 S 266009 Methylovorus glucosotrophus + 0.00 2 2 S1 582744 Methylovorus glucosetrophus SIP3-4 + 0.00 20 0 F 2008793 Sterolibacteriaceae + 0.00 11 0 F1 2211107 unclassified Sterolibacteriaceae + 0.00 11 11 S 2211108 Sterolibacteriaceae bacterium J5B + 0.00 7 0 G 378210 Methyloversatilis + 0.00 7 7 S 1842540 Methyloversatilis sp. RAC08 + 0.00 2 0 G 1054211 Sulfuritalea + 0.00 2 0 S 748811 Sulfuritalea hydrogenivorans + 0.00 2 2 S1 1223802 Sulfuritalea hydrogenivorans sk43H + 0.00 7 0 F 90627 Gallionellaceae + 0.00 5 0 G 96 Gallionella + 0.00 5 0 S 370405 Gallionella capsiferriformans + 0.00 5 5 S1 395494 Gallionella capsiferriformans ES-2 + 0.00 2 0 G 935200 Sulfuricella + 0.00 2 0 S 649841 Sulfuricella denitrificans + 0.00 2 2 S1 1163617 Sulfuricella denitrificans skB26 + 0.00 1 1 O1 1660158 unclassified Nitrosomonadales + 0.00 1 0 F 2008790 Thiobacillaceae + 0.00 1 0 G 1938335 Sulfuritortus + 0.00 1 1 S 1914471 Sulfuritortus calidifontis + 0.00 29 1 O 206389 Rhodocyclales + 0.00 13 0 F 75787 Rhodocyclaceae + 0.00 10 0 G 551759 Aromatoleum + 0.00 10 0 S 551760 Aromatoleum aromaticum + 0.00 10 10 S1 76114 Aromatoleum aromaticum EbN1 + 0.00 3 0 F1 75788 unclassified Rhodocyclaceae + 0.00 3 3 S 1898103 Rhodocyclaceae bacterium + 0.00 9 0 F 2008794 Zoogloeaceae + 0.00 7 0 G 12960 Azoarcus + 0.00 3 3 S 41977 Azoarcus communis + 0.00 2 2 S 418699 Azoarcus olearius + 0.00 1 1 S 748247 Azoarcus sp. KH32C + 0.00 1 1 S 2067960 Azoarcus sp. SY39 + 0.00 2 0 G 33057 Thauera + 0.00 1 1 S 85643 Thauera sp. MZ1T + 0.00 1 1 S 2005884 Thauera sp. K11 + 0.00 6 0 F 2008795 Azonexaceae + 0.00 6 0 G 73029 Dechloromonas + 0.00 5 0 S 259537 Dechloromonas aromatica + 0.00 5 5 S1 159087 Dechloromonas aromatica RCB + 0.00 1 1 S 2231055 Dechloromonas sp. HYN0024 + 0.00 2 0 C1 119066 unclassified Betaproteobacteria + 0.00 1 0 C2 33809 unclassified Betaproteobacteria (miscellaneous) + 0.00 1 1 S 1904640 Betaproteobacteria bacterium GR16-43 + 0.00 1 0 G 327159 Candidatus Accumulibacter + 0.00 1 0 S 327160 Candidatus Accumulibacter phosphatis + 0.00 1 1 S1 522306 Candidatus Accumulibacter phosphatis clade IIA str. UW-1 + 0.06 1392 46 C 28211 Alphaproteobacteria + 0.02 558 2 O 356 Rhizobiales + 0.01 252 0 F 41294 Bradyrhizobiaceae + 0.01 198 18 G 374 Bradyrhizobium + 0.00 108 108 S 288000 Bradyrhizobium sp. BTAi1 + 0.00 54 54 S 2057741 Bradyrhizobium sp. SK17 + 0.00 4 0 S 44255 Bradyrhizobium oligotrophicum + 0.00 4 4 S1 1245469 Bradyrhizobium oligotrophicum S58 + 0.00 3 3 S 1325095 Bradyrhizobium sp. CCBAU 51670 + 0.00 2 2 S 1437360 Bradyrhizobium erythrophlei + 0.00 2 2 S 722472 Bradyrhizobium lablabi + 0.00 2 2 S 1355477 Bradyrhizobium diazoefficiens + 0.00 1 1 S 115808 Bradyrhizobium sp. ORS 285 + 0.00 1 1 S 167468 Bradyrhizobium sp. ORS 3257 + 0.00 1 1 S 1404367 Bradyrhizobium sp. 3 85S1MB + 0.00 1 1 S 375 Bradyrhizobium japonicum + 0.00 1 1 S 1325107 Bradyrhizobium sp. CCBAU 51778 + 0.00 42 0 G 1073 Rhodopseudomonas + 0.00 42 7 S 1076 Rhodopseudomonas palustris + 0.00 29 29 S1 316057 Rhodopseudomonas palustris BisB5 + 0.00 5 5 S1 652103 Rhodopseudomonas palustris DX-1 + 0.00 1 1 S1 316058 Rhodopseudomonas palustris HaA2 + 0.00 4 0 G 85413 Bosea + 0.00 3 3 S 1792307 Bosea sp. PAMC 26642 + 0.00 1 1 S 1526658 Bosea vaviloviae + 0.00 3 0 G 40136 Oligotropha + 0.00 3 3 S 40137 Oligotropha carboxidovorans + 0.00 2 0 G 911 Nitrobacter + 0.00 1 0 S 912 Nitrobacter hamburgensis + 0.00 1 1 S1 323097 Nitrobacter hamburgensis X14 + 0.00 1 0 S 913 Nitrobacter winogradskyi + 0.00 1 1 S1 323098 Nitrobacter winogradskyi Nb-255 + 0.00 2 0 F1 81426 unclassified Bradyrhizobiaceae + 0.00 2 2 S 709797 Bradyrhizobiaceae bacterium SG-6C + 0.00 1 0 G 1033 Afipia + 0.00 1 1 S 1882747 Afipia sp. GAS231 + 0.01 162 0 F 82115 Rhizobiaceae + 0.01 148 24 F1 227290 Rhizobium/Agrobacterium group + 0.00 82 18 G 379 Rhizobium + 0.00 28 26 S 384 Rhizobium leguminosarum + 0.00 2 0 S1 386 Rhizobium leguminosarum bv. trifolii + 0.00 2 2 S2 395492 Rhizobium leguminosarum bv. trifolii WSM2304 + 0.00 12 12 S 2028343 Rhizobium sp. 11515TR + 0.00 8 3 S 29449 Rhizobium etli + 0.00 3 3 S1 538025 Rhizobium etli 8C-3 + 0.00 2 2 S1 347834 Rhizobium etli CFN 42 + 0.00 8 8 S 1301032 Rhizobium sp. IE4771 + 0.00 3 3 S 1571470 Rhizobium sp. ACO-34A + 0.00 2 2 S 56730 Rhizobium gallicum + 0.00 1 1 S 1914541 Rhizobium sp. Y9 + 0.00 1 1 S 1312183 Rhizobium jaguaris + 0.00 1 1 S 2020312 Rhizobium sp. CIAT894 + 0.00 42 1 G 357 Agrobacterium + 0.00 40 1 G1 1183400 Agrobacterium tumefaciens complex + 0.00 25 25 S 1176649 Agrobacterium fabrum + 0.00 14 4 S 358 Agrobacterium tumefaciens + 0.00 9 9 S1 1300225 Agrobacterium tumefaciens WRT31 + 0.00 1 1 S1 311403 Agrobacterium radiobacter K84 + 0.00 1 1 S 359 Agrobacterium rhizogenes + 0.00 11 0 G 323620 Shinella + 0.00 11 11 S 879274 Shinella sp. HZN7 + 0.00 3 0 F1 227292 Sinorhizobium/Ensifer group + 0.00 2 0 G 28105 Sinorhizobium + 0.00 2 2 S 1842534 Sinorhizobium sp. RAC02 + 0.00 1 0 G 106591 Ensifer + 0.00 1 0 S 716925 Ensifer sojae + 0.00 1 1 S1 716928 Ensifer sojae CCBAU 05684 + 0.00 31 0 F 45401 Hyphomicrobiaceae + 0.00 11 0 G 59282 Blastochloris + 0.00 11 11 S 1079 Blastochloris viridis + 0.00 9 0 G 1082930 Pelagibacterium + 0.00 9 0 S 531813 Pelagibacterium halotolerans + 0.00 9 9 S1 1082931 Pelagibacterium halotolerans B2 + 0.00 7 0 G 29407 Rhodoplanes + 0.00 7 7 S 674703 Rhodoplanes sp. Z2-YC6860 + 0.00 3 0 G 81 Hyphomicrobium + 0.00 3 3 S 717785 Hyphomicrobium sp. MC1 + 0.00 1 0 G 1068 Rhodomicrobium + 0.00 1 0 S 1069 Rhodomicrobium vannielii + 0.00 1 1 S1 648757 Rhodomicrobium vannielii ATCC 17100 + 0.00 24 0 F 119045 Methylobacteriaceae + 0.00 16 0 G 2282523 Methylorubrum + 0.00 16 0 S 408 Methylorubrum extorquens + 0.00 15 15 S1 419610 Methylorubrum extorquens PA1 + 0.00 1 1 S1 272630 Methylorubrum extorquens AM1 + 0.00 7 0 G 407 Methylobacterium + 0.00 6 6 S 2067957 Methylobacterium sp. DM1 + 0.00 1 1 S 2051553 Methylobacterium currus + 0.00 1 0 G 186650 Microvirga + 0.00 1 1 S 1882682 Microvirga ossetica + 0.00 23 0 F 69277 Phyllobacteriaceae + 0.00 20 0 G 68287 Mesorhizobium + 0.00 6 6 S 2493670 Mesorhizobium sp. M2A.F.Ca.ET.043.02.1.1 + 0.00 5 0 S 536018 Mesorhizobium australicum + 0.00 5 5 S1 754035 Mesorhizobium australicum WSM2073 + 0.00 2 0 S 71433 Mesorhizobium amorphae + 0.00 2 2 S1 1082933 Mesorhizobium amorphae CCNWGS0123 + 0.00 1 1 S 2493677 Mesorhizobium sp. M6A.T.Cr.TU.016.01.1.1 + 0.00 1 1 S 2493675 Mesorhizobium sp. M4B.F.Ca.ET.058.02.1.1 + 0.00 1 1 S 2082387 Mesorhizobium sp. Pch-S + 0.00 1 1 S 2108445 Mesorhizobium sp. DCY119 + 0.00 1 1 S 2493674 Mesorhizobium sp. M2A.F.Ca.ET.046.03.2.1 + 0.00 1 1 S 381 Mesorhizobium loti + 0.00 1 1 S 2493673 Mesorhizobium sp. M1B.F.Ca.ET.045.04.1.1 + 0.00 2 0 G 31988 Aminobacter + 0.00 1 1 S 83263 Aminobacter aminovorans + 0.00 1 1 S 374606 Aminobacter sp. MSH1 + 0.00 1 0 G 274591 Hoeflea + 0.00 1 1 S 1620421 Hoeflea sp. IMCC20628 + 0.00 16 0 F 772 Bartonellaceae + 0.00 16 2 G 773 Bartonella + 0.00 10 0 S 155194 Bartonella bovis + 0.00 10 10 S1 1094491 Bartonella bovis 91-4 + 0.00 4 4 S 1686310 Bartonella apis + 0.00 13 0 F 118882 Brucellaceae + 0.00 12 1 G 528 Ochrobactrum + 0.00 8 7 S 529 Ochrobactrum anthropi + 0.00 1 1 S1 439375 Ochrobactrum anthropi ATCC 49188 + 0.00 1 1 S 271865 Ochrobactrum sp. A44 + 0.00 1 1 S 419475 Ochrobactrum pseudogrignonense + 0.00 1 1 S 571256 Ochrobactrum pituitosum + 0.00 1 0 G 234 Brucella + 0.00 1 1 S 981386 Brucella vulpis + 0.00 13 0 F 255475 Aurantimonadaceae + 0.00 13 0 G 293088 Martelella + 0.00 13 13 S 1486262 Martelella endophytica + 0.00 12 0 F 335928 Xanthobacteraceae + 0.00 12 0 G 556257 Pseudolabrys + 0.00 12 12 S 2562284 Pseudolabrys sp. FHR47 + 0.00 5 0 O1 119042 unclassified Rhizobiales + 0.00 5 0 O2 41292 unclassified Rhizobiales (miscellaneous) + 0.00 5 5 S 2528642 Rhizobiales bacterium PAMC 29148 + 0.00 2 0 F 31993 Methylocystaceae + 0.00 1 0 G 133 Methylocystis + 0.00 1 1 S 173366 Methylocystis rosea + 0.00 1 0 G 261933 Pleomorphomonas + 0.00 1 1 S 1885025 Pleomorphomonas sp. SM30 + 0.00 2 0 F 655351 Cohaesibacteraceae + 0.00 2 0 G 655352 Cohaesibacter + 0.00 2 2 S 1798205 Cohaesibacter sp. ES.047 + 0.00 1 0 F 2036754 Chelatococcaceae + 0.00 1 0 G 28209 Chelatococcus + 0.00 1 1 S 1702325 Chelatococcus sp. CO-6 + 0.02 405 0 O 204455 Rhodobacterales + 0.02 392 1 F 31989 Rhodobacteraceae + 0.00 55 0 G 60136 Sulfitobacter + 0.00 47 47 S 1389005 Sulfitobacter sp. SK012 + 0.00 5 5 S 1402135 Sulfitobacter pseudonitzschiae + 0.00 2 2 S 1389004 Sulfitobacter sp. SK011 + 0.00 1 1 S 664426 Sulfitobacter sp. BSw21498 + 0.00 39 0 G 34008 Rhodovulum + 0.00 32 32 S 1564506 Rhodovulum sp. P5 + 0.00 6 6 S 308754 Rhodovulum sp. MB263 + 0.00 1 1 S 35806 Rhodovulum sulfidophilum + 0.00 38 0 G 1649279 Epibacterium + 0.00 38 38 S 379347 Epibacterium mobile + 0.00 32 0 G 2433 Roseobacter + 0.00 29 29 S 2434 Roseobacter denitrificans + 0.00 3 0 S 42443 Roseobacter litoralis + 0.00 3 3 S1 391595 Roseobacter litoralis Och 149 + 0.00 30 0 G 258255 Pseudovibrio + 0.00 30 30 S 911045 Pseudovibrio sp. FO-BEG1 + 0.00 28 1 G 478070 Labrenzia + 0.00 26 0 S 388408 Labrenzia alexandrii + 0.00 26 26 S1 244592 Labrenzia alexandrii DFL-11 + 0.00 1 1 S 2590016 Labrenzia sp. PHM005 + 0.00 26 18 G 265 Paracoccus + 0.00 4 4 S 1499308 Paracoccus mutanolyticus + 0.00 1 0 S 34003 Paracoccus aminophilus + 0.00 1 1 S1 1367847 Paracoccus aminophilus JCM 7686 + 0.00 1 1 S 1077935 Paracoccus zhejiangensis + 0.00 1 1 S 1529068 Paracoccus sp. BM15 + 0.00 1 1 S 2560053 Paracoccus sp. 2251 + 0.00 25 0 G 1541818 Sedimentitalea + 0.00 25 25 S 2483033 Sedimentitalea sp. W43 + 0.00 21 0 G 119541 Rhodobaca + 0.00 21 21 S 441209 Rhodobaca barguzinensis + 0.00 17 0 G 367771 Marinovum + 0.00 17 0 S 42444 Marinovum algicola + 0.00 17 17 S1 988812 Marinovum algicola DG 898 + 0.00 17 0 G 1609958 Confluentimicrobium + 0.00 17 17 S 1609966 Confluentimicrobium sp. EMB200-NS6 + 0.00 13 1 G 302485 Phaeobacter + 0.00 8 8 S 681157 Phaeobacter sp. LSS9 + 0.00 2 2 S 60890 Phaeobacter gallaeciensis + 0.00 2 2 S 221822 Phaeobacter inhibens + 0.00 9 0 G 1060 Rhodobacter + 0.00 8 8 S 1075 Rhodobacter blasticus + 0.00 1 1 S 1850250 Rhodobacter sp. LPB0142 + 0.00 8 0 G 191028 Leisingera + 0.00 7 7 S 2508306 Leisingera sp. NJS201 + 0.00 1 0 S 133924 Leisingera methylohalidivorans + 0.00 1 1 S1 999552 Leisingera methylohalidivorans DSM 14336 + 0.00 7 0 F1 58840 unclassified Rhodobacteraceae + 0.00 5 5 S 1904441 Rhodobacteraceae bacterium + 0.00 2 2 S 2171755 Rhodobacteraceae bacterium BAR1 + 0.00 6 0 G 53945 Octadecabacter + 0.00 3 0 S 1217908 Octadecabacter antarcticus + 0.00 3 3 S1 391626 Octadecabacter antarcticus 307 + 0.00 3 3 S 1458307 Octadecabacter temperatus + 0.00 4 0 G 204456 Gemmobacter + 0.00 4 4 S 2169400 Gemmobacter sp. HYN0069 + 0.00 4 0 G 1097466 Defluviimonas + 0.00 4 4 S 1335048 Defluviimonas alba + 0.00 3 0 G 97050 Ruegeria + 0.00 2 0 S 89184 Ruegeria pomeroyi + 0.00 2 2 S1 246200 Ruegeria pomeroyi DSS-3 + 0.00 1 1 S 292414 Ruegeria sp. TM1040 + 0.00 3 0 G 74032 Antarctobacter + 0.00 3 3 S 74033 Antarctobacter heliothermus + 0.00 2 0 G 159345 Roseibacterium + 0.00 2 0 S 159346 Roseibacterium elongatum + 0.00 2 2 S1 1294273 Roseibacterium elongatum DSM 19469 + 0.00 1 0 G 875170 Celeribacter + 0.00 1 1 S 1397108 Celeribacter marinus + 0.00 1 0 G 238783 Pseudorhodobacter + 0.00 1 1 S 2500533 Pseudorhodobacter sp. S12M18 + 0.00 1 0 G 1955420 Silicimonas + 0.00 1 1 S 1826607 Silicimonas algicola + 0.00 1 0 G 309512 Dinoroseobacter + 0.00 1 0 S 215813 Dinoroseobacter shibae + 0.00 1 1 S1 398580 Dinoroseobacter shibae DFL 12 = DSM 16493 + 0.00 13 0 F 69657 Hyphomonadaceae + 0.00 8 0 G 85 Hyphomonas + 0.00 8 8 S 1906738 Hyphomonas sp. Mor2 + 0.00 5 0 G 2723 Hirschia + 0.00 5 0 S 2724 Hirschia baltica + 0.00 5 5 S1 582402 Hirschia baltica ATCC 49814 + 0.00 115 0 O 204457 Sphingomonadales + 0.00 79 1 F 41297 Sphingomonadaceae + 0.00 24 0 G 72173 Citromicrobium + 0.00 24 24 S 1634516 Citromicrobium sp. JL477 + 0.00 24 0 G 1434046 Sphingorhabdus + 0.00 20 20 S 1806885 Sphingorhabdus sp. M41 + 0.00 3 3 S 2584094 Sphingorhabdus sp. SMR4y + 0.00 1 1 S 1922222 Sphingorhabdus sp. Alg231-15 + 0.00 15 0 G 165695 Sphingobium + 0.00 5 5 S 13690 Sphingobium yanoikuyae + 0.00 3 3 S 1332080 Sphingobium baderi + 0.00 2 2 S 1855519 Sphingobium sp. EP60837 + 0.00 1 1 S 76947 Sphingobium herbicidovorans + 0.00 1 1 S 2082188 Sphingobium sp. YG1 + 0.00 1 0 S 332056 Sphingobium japonicum + 0.00 1 1 S1 452662 Sphingobium japonicum UT26S + 0.00 1 1 S 407020 Sphingobium sp. MI1205 + 0.00 1 1 S 484429 Sphingobium sp. YBL2 + 0.00 9 0 G 13687 Sphingomonas + 0.00 5 5 S 745310 Sphingomonas sp. MM-1 + 0.00 2 2 S 2565555 Sphingomonas sp. PAMC26645 + 0.00 1 1 S 1938607 Sphingomonas sp. LM7 + 0.00 1 1 S 1327635 Sphingomonas sp. Cra20 + 0.00 3 0 G 165696 Novosphingobium + 0.00 3 3 S 2571749 Novosphingobium sp. ABRDHK2 + 0.00 2 0 G 165697 Sphingopyxis + 0.00 1 1 S 2054227 Sphingopyxis lindanitolerans + 0.00 1 1 S 2565556 Sphingopyxis sp. PAMC25046 + 0.00 1 0 G 541 Zymomonas + 0.00 1 1 S 542 Zymomonas mobilis + 0.00 36 0 F 335929 Erythrobacteraceae + 0.00 16 0 G 1111 Porphyrobacter + 0.00 12 12 S 1896196 Porphyrobacter sp. LM 6 + 0.00 4 4 S 2547601 Porphyrobacter sp. YT40 + 0.00 13 0 G 361177 Altererythrobacter + 0.00 8 8 S 476157 Altererythrobacter ishigakiensis + 0.00 3 3 S 2060312 Altererythrobacter sp. B11 + 0.00 1 1 S 645517 Altererythrobacter namhicola + 0.00 1 1 S 1982042 Altererythrobacter mangrovi + 0.00 7 0 G 1041 Erythrobacter + 0.00 6 6 S 2502843 Erythrobacter sp. HKB08 + 0.00 1 1 S 1798193 Erythrobacter sp. HL-111 + 0.00 112 0 O 204441 Rhodospirillales + 0.00 69 0 F 41295 Rhodospirillaceae + 0.00 31 0 G 13134 Magnetospirillum + 0.00 30 30 S 55518 Magnetospirillum gryphiswaldense + 0.00 1 0 S 84159 Magnetospirillum magneticum + 0.00 1 1 S1 342108 Magnetospirillum magneticum AMB-1 + 0.00 18 0 G 168934 Thalassospira + 0.00 16 16 S 2048283 Thalassospira marina + 0.00 2 0 S 220697 Thalassospira xiamenensis + 0.00 2 2 S1 1123366 Thalassospira xiamenensis M-5 = DSM 17429 + 0.00 14 0 G 1543704 Niveispirillum + 0.00 14 14 S 1612173 Niveispirillum cyanobacteriorum + 0.00 4 1 G 191 Azospirillum + 0.00 1 1 S 192 Azospirillum brasilense + 0.00 1 1 S 528244 Azospirillum thiophilum + 0.00 1 1 S 652764 Azospirillum sp. TSH100 + 0.00 1 0 G 1081 Rhodospirillum + 0.00 1 1 S 1085 Rhodospirillum rubrum + 0.00 1 0 G 1612157 Pararhodospirillum + 0.00 1 0 S 1084 Pararhodospirillum photometricum + 0.00 1 1 S1 1150469 Pararhodospirillum photometricum DSM 122 + 0.00 43 5 F 433 Acetobacteraceae + 0.00 10 2 G 434 Acetobacter + 0.00 4 3 S 438 Acetobacter pasteurianus + 0.00 1 1 S1 481145 Acetobacter pasteurianus subsp. pasteurianus + 0.00 2 2 S 104102 Acetobacter tropicalis + 0.00 1 1 S 146474 Acetobacter orientalis + 0.00 1 1 S 1076596 Acetobacter persici + 0.00 8 0 G 364409 Granulibacter + 0.00 8 8 S 364410 Granulibacter bethesdensis + 0.00 7 0 G 1649499 Swingsia + 0.00 5 5 S 1293412 Swingsia samuiensis + 0.00 2 2 S 2558361 Swingsia sp. F3b2 + 0.00 6 1 G 1434011 Komagataeibacter + 0.00 2 1 S 28448 Komagataeibacter xylinus + 0.00 1 1 S1 1296990 Komagataeibacter xylinus E25 + 0.00 2 0 S 1177712 Komagataeibacter medellinensis + 0.00 2 2 S1 634177 Komagataeibacter medellinensis NBRC 3288 + 0.00 1 1 S 33995 Komagataeibacter europaeus + 0.00 2 0 G 441 Gluconobacter + 0.00 2 0 S 442 Gluconobacter oxydans + 0.00 2 2 S1 1288313 Gluconobacter oxydans DSM 3504 + 0.00 2 2 G 522 Acidiphilium + 0.00 1 1 G 125216 Roseomonas + 0.00 1 0 G 1079922 Commensalibacter + 0.00 1 1 S 2478912 Commensalibacter sp. AMU001 + 0.00 1 0 G 1223423 Neokomagataea + 0.00 1 1 S 2558360 Neokomagataea sp. Ha5 + 0.00 98 0 C1 82117 unclassified Alphaproteobacteria + 0.00 97 0 G 1632780 Phreatobacter + 0.00 97 97 S 1940610 Phreatobacter stygius + 0.00 1 0 G 213485 Micavibrio + 0.00 1 0 S 349221 Micavibrio aeruginosavorus + 0.00 1 1 S1 349215 Micavibrio aeruginosavorus EPB + 0.00 31 0 O 766 Rickettsiales + 0.00 25 0 F 942 Anaplasmataceae + 0.00 21 0 G 943 Ehrlichia + 0.00 21 0 G1 106178 canis group + 0.00 21 21 S 779 Ehrlichia ruminantium + 0.00 3 0 F1 952 Wolbachieae + 0.00 3 3 G 953 Wolbachia + 0.00 1 0 G 768 Anaplasma + 0.00 1 0 S 142058 Anaplasma ovis + 0.00 1 1 S1 1248439 Anaplasma ovis str. Haibei + 0.00 6 0 F 775 Rickettsiaceae + 0.00 6 0 F1 33988 Rickettsieae + 0.00 6 0 G 780 Rickettsia + 0.00 6 6 G1 114277 spotted fever group + 0.00 15 0 O 54526 Pelagibacterales + 0.00 15 0 F 1655514 Pelagibacteraceae + 0.00 15 0 G 198251 Candidatus Pelagibacter + 0.00 12 0 S 198252 Candidatus Pelagibacter ubique + 0.00 12 12 S1 335992 Candidatus Pelagibacter ubique HTCC1062 + 0.00 3 3 S 1002672 Candidatus Pelagibacter sp. IMCC9063 + 0.00 7 0 O 204458 Caulobacterales + 0.00 7 0 F 76892 Caulobacteraceae + 0.00 3 0 G 75 Caulobacter + 0.00 1 1 S 69665 Caulobacter sp. FWC26 + 0.00 1 1 S 155892 Caulobacter vibrioides + 0.00 1 1 S 1679497 Caulobacter flavus + 0.00 3 0 F1 81440 unclassified Caulobacteraceae + 0.00 3 3 S 1759059 Caulobacteraceae bacterium OTSz_A_272 + 0.00 1 0 G 76890 Asticcacaulis + 0.00 1 1 S 78587 Asticcacaulis excentricus + 0.00 4 0 O 1191478 Magnetococcales + 0.00 4 0 F 1191479 Magnetococcaceae + 0.00 4 0 G 162171 Magnetococcus + 0.00 4 0 S 1124597 Magnetococcus marinus + 0.00 4 4 S1 156889 Magnetococcus marinus MC-1 + 0.00 1 0 O 1921002 Holosporales + 0.00 1 0 F 1777752 Candidatus Paracaedibacteraceae + 0.00 1 0 G 1521255 Candidatus Paracaedibacter + 0.00 1 1 S 91604 Candidatus Paracaedibacter acanthamoebae + 0.02 550 0 P1 68525 delta/epsilon subdivisions + 0.01 331 0 C 29547 Epsilonproteobacteria + 0.01 329 0 O 213849 Campylobacterales + 0.01 210 40 F 72294 Campylobacteraceae + 0.00 91 0 F1 2321108 Arcobacter group + 0.00 65 3 G 28196 Arcobacter + 0.00 19 0 S 28198 Arcobacter cryaerophilus + 0.00 19 19 S1 1032070 Arcobacter cryaerophilus ATCC 43158 + 0.00 12 0 S 28199 Arcobacter nitrofigilis + 0.00 12 12 S1 572480 Arcobacter nitrofigilis DSM 7299 + 0.00 11 0 S 1278212 Arcobacter suis + 0.00 11 11 S1 663365 Arcobacter suis CECT 7833 + 0.00 7 7 S 505249 Arcobacter marinus + 0.00 5 5 S 1080223 Arcobacter pacificus + 0.00 4 0 S 1032072 Arcobacter molluscorum + 0.00 4 4 S1 870501 Arcobacter molluscorum LMG 25693 + 0.00 3 0 S 603050 Arcobacter mytili + 0.00 3 3 S1 1032238 Arcobacter mytili LMG 24559 + 0.00 1 1 S 663364 Arcobacter bivalviorum + 0.00 26 25 F2 2321207 unclassified Arcobacter group + 0.00 1 1 S 944547 Arcobacter sp. L + 0.00 46 1 G 194 Campylobacter + 0.00 37 37 S 28898 Campylobacter helveticus + 0.00 2 2 S 1244531 Campylobacter iguaniorum + 0.00 1 0 S 1965231 Campylobacter pinnipediorum + 0.00 1 1 S1 1874362 Campylobacter pinnipediorum subsp. caledonicus + 0.00 1 0 S 374106 Campylobacter cuniculorum + 0.00 1 1 S1 1121267 Campylobacter cuniculorum DSM 23162 = LMG 24588 + 0.00 1 0 S 488546 Campylobacter peloridis + 0.00 1 1 S1 1388753 Campylobacter peloridis LMG 23910 + 0.00 1 1 S 195 Campylobacter coli + 0.00 1 0 S 199 Campylobacter concisus + 0.00 1 1 S1 360104 Campylobacter concisus 13826 + 0.00 1 1 S 1813019 Campylobacter hepaticus + 0.00 33 0 G 57665 Sulfurospirillum + 0.00 16 0 S 194424 Sulfurospirillum halorespirans + 0.00 16 16 S1 1193502 Sulfurospirillum halorespirans DSM 13726 + 0.00 12 12 S 366522 Sulfurospirillum cavolei + 0.00 4 4 S 1581011 Sulfurospirillum sp. UCH001 + 0.00 1 0 S 65553 Sulfurospirillum deleyianum + 0.00 1 1 S1 525898 Sulfurospirillum deleyianum DSM 6946 + 0.00 119 0 F 72293 Helicobacteraceae + 0.00 97 0 G 209 Helicobacter + 0.00 33 33 S 35818 Helicobacter pullorum + 0.00 26 0 S 210 Helicobacter pylori + 0.00 25 25 S1 1382925 Helicobacter pylori oki673 + 0.00 1 1 S1 907239 Helicobacter pylori SouthAfrica7 + 0.00 16 16 S 213 Helicobacter cinaedi + 0.00 9 9 S 76936 Helicobacter typhlonius + 0.00 5 5 S 37372 Helicobacter bilis + 0.00 5 0 S 56877 Helicobacter bizzozeronii + 0.00 5 5 S1 1002804 Helicobacter bizzozeronii CIII-1 + 0.00 1 1 S 1548018 Helicobacter saguini + 0.00 1 1 S 217 Helicobacter mustelae + 0.00 1 1 S 45498 Helicobacter cholecystus + 0.00 22 0 G 202746 Sulfurimonas + 0.00 19 0 S 1176482 Sulfurimonas gotlandica + 0.00 19 19 S1 929558 Sulfurimonas gotlandica GD1 + 0.00 3 0 S 202747 Sulfurimonas autotrophica + 0.00 3 3 S1 563040 Sulfurimonas autotrophica DSM 16294 + 0.00 1 0 C1 34035 unclassified Epsilonproteobacteria + 0.00 1 0 G 269258 Nitratiruptor + 0.00 1 1 S 387092 Nitratiruptor sp. SB155-2 + 0.00 1 0 O 235899 Nautiliales + 0.00 1 0 F 224467 Nautiliaceae + 0.00 1 0 G 191291 Nautilia + 0.00 1 0 S 244787 Nautilia profundicola + 0.00 1 1 S1 598659 Nautilia profundicola AmH + 0.01 219 0 C 28221 Deltaproteobacteria + 0.00 92 0 O 213118 Desulfobacterales + 0.00 90 0 F 213119 Desulfobacteraceae + 0.00 37 0 G 2289 Desulfobacter + 0.00 35 0 S 2293 Desulfobacter postgatei + 0.00 35 35 S1 879212 Desulfobacter postgatei 2ac9 + 0.00 2 2 S 2291 Desulfobacter hydrogenophilus + 0.00 27 0 G 896 Desulfococcus + 0.00 27 27 S 897 Desulfococcus multivorans + 0.00 25 0 G 2295 Desulfobacterium + 0.00 25 0 S 2296 Desulfobacterium autotrophicum + 0.00 25 25 S1 177437 Desulfobacterium autotrophicum HRM2 + 0.00 1 0 G 218207 Desulfatibacillum + 0.00 1 1 S 218208 Desulfatibacillum aliphaticivorans + 0.00 2 0 F 213121 Desulfobulbaceae + 0.00 2 0 G 53318 Desulfocapsa + 0.00 2 0 S 65555 Desulfocapsa sulfexigens + 0.00 2 2 S1 1167006 Desulfocapsa sulfexigens DSM 10523 + 0.00 60 0 O 29 Myxococcales + 0.00 33 0 O1 80811 Cystobacterineae + 0.00 31 0 F 39 Archangiaceae + 0.00 31 0 G 40 Stigmatella + 0.00 31 0 S 41 Stigmatella aurantiaca + 0.00 31 31 S1 378806 Stigmatella aurantiaca DW4/3-1 + 0.00 1 0 F 31 Myxococcaceae + 0.00 1 0 G 32 Myxococcus + 0.00 1 0 S 83455 Myxococcus stipitatus + 0.00 1 1 S1 1278073 Myxococcus stipitatus DSM 14675 + 0.00 1 0 F 1524213 Vulgatibacteraceae + 0.00 1 0 G 1524214 Vulgatibacter + 0.00 1 1 S 1391653 Vulgatibacter incomptus + 0.00 27 0 O1 80812 Sorangiineae + 0.00 27 0 F 49 Polyangiaceae + 0.00 25 0 G 50 Chondromyces + 0.00 25 25 S 52 Chondromyces crocatus + 0.00 2 0 G 39643 Sorangium + 0.00 2 1 S 56 Sorangium cellulosum + 0.00 1 1 S1 448385 Sorangium cellulosum So ce56 + 0.00 21 0 O 213462 Syntrophobacterales + 0.00 21 0 F 213465 Syntrophobacteraceae + 0.00 21 0 G 29526 Syntrophobacter + 0.00 21 0 S 119484 Syntrophobacter fumaroxidans + 0.00 21 21 S1 335543 Syntrophobacter fumaroxidans MPOB + 0.00 20 0 O 213115 Desulfovibrionales + 0.00 20 0 F 194924 Desulfovibrionaceae + 0.00 19 0 G 872 Desulfovibrio + 0.00 17 0 S 879 Desulfovibrio gigas + 0.00 17 17 S1 1121448 Desulfovibrio gigas DSM 1382 = ATCC 19364 + 0.00 2 0 S 191026 Desulfovibrio hydrothermalis + 0.00 2 2 S1 1121451 Desulfovibrio hydrothermalis AM13 = DSM 14728 + 0.00 1 0 G 2035811 Pseudodesulfovibrio + 0.00 1 1 S 57320 Pseudodesulfovibrio profundus + 0.00 13 0 O 69541 Desulfuromonadales + 0.00 9 0 F 213422 Geobacteraceae + 0.00 9 0 G 28231 Geobacter + 0.00 7 7 S 1340425 Geobacter anodireducens + 0.00 1 1 S 345632 Geobacter pickeringii + 0.00 1 1 S 443143 Geobacter sp. M18 + 0.00 4 0 F 213421 Desulfuromonadaceae + 0.00 4 0 G 18 Pelobacter + 0.00 2 0 S 29543 Pelobacter propionicus + 0.00 2 2 S1 338966 Pelobacter propionicus DSM 2379 + 0.00 2 2 S 1842532 Pelobacter sp. SFB93 + 0.00 13 0 O 1779134 Bradymonadales + 0.00 13 0 F 1779135 Bradymonadaceae + 0.00 13 0 G 1779136 Bradymonas + 0.00 13 13 S 2589075 Bradymonas sp. YN101 + 0.00 13 0 C 1553900 Oligoflexia + 0.00 5 0 O 2024973 Silvanigrellales + 0.00 5 0 O1 2024980 unclassified Silvanigrellales + 0.00 5 0 O2 2493640 unclassified Silvanigrellales (miscellaneous) + 0.00 5 5 S 2493639 Silvanigrellales bacterium RF1110005 + 0.00 4 0 O 213481 Bdellovibrionales + 0.00 4 0 F 213483 Bdellovibrionaceae + 0.00 4 0 G 958 Bdellovibrio + 0.00 4 0 S 959 Bdellovibrio bacteriovorus + 0.00 4 4 S1 765869 Bdellovibrio bacteriovorus W + 0.00 4 0 O 2024979 Bacteriovoracales + 0.00 3 0 F 263369 Bacteriovoracaceae + 0.00 3 0 G 146784 Bacteriovorax + 0.00 3 3 S 960 Bacteriovorax stolpii + 0.00 1 0 F 1652132 Halobacteriovoraceae + 0.00 1 0 G 1652133 Halobacteriovorax + 0.00 1 1 S 2109558 Halobacteriovorax sp. BALOs_7 + 0.00 10 0 C 580370 Zetaproteobacteria + 0.00 10 0 O 580371 Mariprofundales + 0.00 10 0 F 580372 Mariprofundaceae + 0.00 10 0 G 377315 Mariprofundus + 0.00 8 8 S 1921087 Mariprofundus ferrinatatus + 0.00 2 2 S 1921086 Mariprofundus aestuarium + 0.00 2 0 C 1807140 Acidithiobacillia + 0.00 2 0 O 225057 Acidithiobacillales + 0.00 2 0 F 225058 Acidithiobacillaceae + 0.00 2 0 G 119977 Acidithiobacillus + 0.00 2 2 S 160808 Acidithiobacillus ferrivorans + 1.01 24565 117 D1 1783272 Terrabacteria group + 0.84 20455 11 P 1239 Firmicutes + 0.81 19897 49 C 91061 Bacilli + 0.73 17799 18 O 1385 Bacillales + 0.68 16690 10 F 90964 Staphylococcaceae + 0.68 16638 367 G 1279 Staphylococcus + 0.64 15634 15184 S 29385 Staphylococcus saprophyticus + 0.02 450 443 S1 147452 Staphylococcus saprophyticus subsp. saprophyticus + 0.00 7 7 S2 342451 Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 = NCTC 7292 + 0.01 180 180 S 29382 Staphylococcus cohnii + 0.00 71 47 S 283734 Staphylococcus pseudintermedius + 0.00 24 24 S1 937773 Staphylococcus pseudintermedius HKU10-03 + 0.00 66 5 S 1292 Staphylococcus warneri + 0.00 61 61 S1 1194526 Staphylococcus warneri SG1 + 0.00 38 38 S 45972 Staphylococcus pasteuri + 0.00 37 37 S 1280 Staphylococcus aureus + 0.00 32 25 S 1282 Staphylococcus epidermidis + 0.00 7 7 S1 176279 Staphylococcus epidermidis RP62A + 0.00 30 30 S 214473 Staphylococcus nepalensis + 0.00 29 29 S 1715860 Staphylococcus sp. AntiMn-1 + 0.00 21 1 S 1296 Staphylococcus sciuri + 0.00 20 20 S1 147467 Staphylococcus sciuri subsp. sciuri + 0.00 19 19 S 1288 Staphylococcus xylosus + 0.00 17 17 S 170573 Staphylococcus pettenkoferi + 0.00 16 14 S 1283 Staphylococcus haemolyticus + 0.00 2 2 S1 279808 Staphylococcus haemolyticus JCSC1435 + 0.00 15 15 S 1654388 Staphylococcus schweitzeri + 0.00 10 10 S 61015 Staphylococcus succinus + 0.00 9 9 S 1281 Staphylococcus carnosus + 0.00 8 8 S 29384 Staphylococcus kloosii + 0.00 7 7 S 246432 Staphylococcus equorum + 0.00 6 6 S 28035 Staphylococcus lugdunensis + 0.00 5 5 S 29379 Staphylococcus auricularis + 0.00 5 5 S 1286 Staphylococcus simulans + 0.00 3 3 S 2044912 Staphylococcus sp. SDB 2975 + 0.00 3 3 S 985002 Staphylococcus argenteus + 0.00 3 2 S 1290 Staphylococcus hominis + 0.00 1 1 S1 145391 Staphylococcus hominis subsp. hominis + 0.00 2 2 S 155085 Staphylococcus lutrae + 0.00 1 1 S 29380 Staphylococcus caprae + 0.00 1 1 S 308354 Staphylococcus simiae + 0.00 1 1 S 70255 Staphylococcus condimenti + 0.00 1 1 S 53344 Staphylococcus delphini + 0.00 1 1 S 29388 Staphylococcus capitis + 0.00 20 0 G 69965 Macrococcus + 0.00 20 20 S 1898474 Macrococcus sp. IME1552 + 0.00 17 0 G 227979 Jeotgalicoccus + 0.00 17 17 S 1461582 Jeotgalicoccus saudimassiliensis + 0.00 4 0 G 2005363 Auricoccus + 0.00 4 4 S 1849491 Auricoccus indicus + 0.00 1 0 G 45669 Salinicoccus + 0.00 1 1 S 407035 Salinicoccus halodurans + 0.02 593 7 F 186817 Bacillaceae + 0.02 434 180 G 1386 Bacillus + 0.00 105 31 G1 86661 Bacillus cereus group + 0.00 49 27 S 1396 Bacillus cereus + 0.00 14 14 S1 526973 Bacillus cereus m1293 + 0.00 6 6 S1 526981 Bacillus cereus Rock1-3 + 0.00 1 1 S1 1126681 Bacillus cereus F + 0.00 1 1 S1 526989 Bacillus cereus F65185 + 0.00 16 5 S 1428 Bacillus thuringiensis + 0.00 10 0 S1 180877 Bacillus thuringiensis serovar pulsiensis + 0.00 10 10 S2 527028 Bacillus thuringiensis serovar pulsiensis BGSC 4CC1 + 0.00 1 1 S1 1423143 Bacillus thuringiensis Bt18247 + 0.00 8 8 S 2026190 Bacillus mobilis + 0.00 1 1 S 64104 Bacillus pseudomycoides + 0.00 34 4 G1 653685 Bacillus subtilis group + 0.00 9 1 S 1423 Bacillus subtilis + 0.00 8 1 S1 135461 Bacillus subtilis subsp. subtilis + 0.00 7 7 S2 1052588 Bacillus subtilis subsp. subtilis str. RO-NN-1 + 0.00 9 2 G2 1938374 Bacillus amyloliquefaciens group + 0.00 7 7 S 492670 Bacillus velezensis + 0.00 4 4 S 72361 Bacillus vallismortis + 0.00 4 0 G2 653388 Bacillus mojavensis subgroup + 0.00 4 4 S 260554 Bacillus halotolerans + 0.00 3 3 S 1402 Bacillus licheniformis + 0.00 1 1 S 119858 Bacillus sonorensis + 0.00 33 24 S 1478 Bacillus simplex + 0.00 9 9 S1 1349754 Bacillus simplex NBRC 15720 = DSM 1321 + 0.00 12 12 S 33932 Bacillus cohnii + 0.00 10 10 S 1664069 Bacillus glycinifermentans + 0.00 8 0 S 665099 Bacillus oceanisediminis + 0.00 8 8 S1 1196031 Bacillus oceanisediminis 2691 + 0.00 7 0 S 300825 Bacillus lehensis + 0.00 7 7 S1 1246626 Bacillus lehensis G1 + 0.00 6 6 S 1705566 Bacillus sp. FJAT-18017 + 0.00 6 6 S 199441 Bacillus krulwichiae + 0.00 4 4 S 1408 Bacillus pumilus + 0.00 4 4 S 666686 Bacillus sp. 1NLA3E + 0.00 3 3 S 189381 Bacillus marisflavi + 0.00 3 2 S 1404 Bacillus megaterium + 0.00 1 1 S1 1452722 Bacillus megaterium Q3 + 0.00 2 2 S 1402861 Bacillus filamentosus + 0.00 2 2 S 79883 Bacillus horikoshii + 0.00 2 2 S 86664 Bacillus flexus + 0.00 2 0 S 1413 Bacillus cellulosilyticus + 0.00 2 2 S1 649639 Bacillus cellulosilyticus DSM 2522 + 0.00 1 1 S 1547283 Bacillus weihaiensis + 0.00 1 1 S 1565991 Bacillus sp. X1(2014) + 0.00 1 1 S 1581038 Bacillus sp. FJAT-22090 + 0.00 1 1 S 561879 Bacillus safensis + 0.00 1 1 S 421767 Bacillus butanolivorans + 0.00 1 1 S 1398 Bacillus coagulans + 0.00 1 1 S 79880 Bacillus clausii + 0.00 1 0 S 79885 Bacillus pseudofirmus + 0.00 1 1 S1 398511 Bacillus pseudofirmus OF4 + 0.00 1 1 S 35841 Bacillus thermoamylovorans + 0.00 1 1 S 98228 Bacillus sp. OxB-1 + 0.00 1 1 S 86665 Bacillus halodurans + 0.00 59 32 G 400634 Lysinibacillus + 0.00 21 21 S 2169540 Lysinibacillus sp. 2017 + 0.00 3 3 S 2072025 Lysinibacillus sp. YS11 + 0.00 2 2 S 28031 Lysinibacillus fusiformis + 0.00 1 1 S 2070463 Lysinibacillus sp. SGAir0095 + 0.00 49 0 G 84406 Virgibacillus + 0.00 46 46 S 2017483 Virgibacillus phasianinus + 0.00 3 3 S 1911587 Virgibacillus sp. 6R + 0.00 11 0 G 459532 Terribacillus + 0.00 11 11 S 386490 Terribacillus goriensis + 0.00 7 0 G 1906945 Parageobacillus + 0.00 7 7 S 1295642 Parageobacillus genomosp. 1 + 0.00 6 6 G 129337 Geobacillus + 0.00 5 0 G 45667 Halobacillus + 0.00 5 5 S 402384 Halobacillus mangrovi + 0.00 4 4 G 182709 Oceanobacillus + 0.00 4 0 G 1329200 Fictibacillus + 0.00 4 4 S 255247 Fictibacillus arsenicus + 0.00 3 2 G 150247 Anoxybacillus + 0.00 1 1 S 294699 Anoxybacillus amylolyticus + 0.00 2 0 G 351195 Salimicrobium + 0.00 2 2 S 1230341 Salimicrobium jeotgali + 0.00 1 0 G 29331 Amphibacillus + 0.00 1 0 S 1449 Amphibacillus xylanus + 0.00 1 1 S1 698758 Amphibacillus xylanus NBRC 15112 + 0.00 1 0 G 175304 Lentibacillus + 0.00 1 1 S 1472767 Lentibacillus amyloliquefaciens + 0.01 291 5 F 186822 Paenibacillaceae + 0.01 258 7 G 44249 Paenibacillus + 0.00 47 47 S 481743 Paenibacillus sp. Y412MC10 + 0.00 36 5 S 44251 Paenibacillus durus + 0.00 31 31 S1 1333534 Paenibacillus durus ATCC 35681 + 0.00 35 35 S 1616788 Paenibacillus bovis + 0.00 31 31 S 1401 Paenibacillus lautus + 0.00 31 31 S 2494549 Paenibacillus sp. MBLB1234 + 0.00 23 7 S 1406 Paenibacillus polymyxa + 0.00 16 16 S1 1052684 Paenibacillus polymyxa M1 + 0.00 14 14 S 1536773 Paenibacillus sp. FSL R7-0331 + 0.00 10 10 S 1536769 Paenibacillus sp. FSL P4-0081 + 0.00 6 6 S 1338368 Paenibacillus lentus + 0.00 4 0 S 159743 Paenibacillus terrae + 0.00 4 4 S1 985665 Paenibacillus terrae HPL-003 + 0.00 4 0 S 365617 Paenibacillus sabinae + 0.00 4 4 S1 1268072 Paenibacillus sabinae T27 + 0.00 3 3 S 867076 Paenibacillus sp. IHB B 3084 + 0.00 2 2 S 189426 Paenibacillus odorifer + 0.00 2 2 S 2509456 Paenibacillus sp. FW100M-2 + 0.00 1 1 S 1566358 Paenibacillus sp. IHBB 10380 + 0.00 1 1 S 1763538 Paenibacillus crassostreae + 0.00 1 1 S 1619311 Paenibacillus physcomitrellae + 0.00 15 0 F1 234447 unclassified Paenibacillaceae + 0.00 15 15 S 1882832 Paenibacillaceae bacterium GAS479 + 0.00 12 0 G 55080 Brevibacillus + 0.00 11 0 S 1393 Brevibacillus brevis + 0.00 11 11 S1 358681 Brevibacillus brevis NBRC 100599 + 0.00 1 1 S 51101 Brevibacillus agri + 0.00 1 0 G 329857 Cohnella + 0.00 1 1 S 2480923 Cohnella sp. 18JY8-7 + 0.01 145 0 F 186818 Planococcaceae + 0.00 102 31 G 1372 Planococcus + 0.00 42 0 S 161360 Planococcus antarcticus + 0.00 42 42 S1 1185653 Planococcus antarcticus DSM 14505 + 0.00 25 25 S 1302659 Planococcus versutus + 0.00 2 2 S 2213202 Planococcus sp. Y42 + 0.00 1 1 S 1038856 Planococcus plakortidis + 0.00 1 1 S 2058136 Planococcus sp. MB-3u-03 + 0.00 23 0 G 1649 Kurthia + 0.00 22 22 S 1650 Kurthia zopfii + 0.00 1 1 S 1750719 Kurthia sp. 11kri321 + 0.00 11 8 G 1569 Sporosarcina + 0.00 3 3 S 1476 Sporosarcina psychrophila + 0.00 4 0 G 648802 Rummeliibacillus + 0.00 4 4 S 241244 Rummeliibacillus stabekisii + 0.00 3 0 G 648800 Solibacillus + 0.00 2 2 S 76853 Solibacillus silvestris + 0.00 1 1 S 2048654 Solibacillus sp. R5-41 + 0.00 1 0 G 157226 Jeotgalibacillus + 0.00 1 1 S 1508404 Jeotgalibacillus malaysiensis + 0.00 1 0 G 160795 Ureibacillus + 0.00 1 1 S 51173 Ureibacillus thermosphaericus + 0.00 24 0 O1 539002 Bacillales incertae sedis + 0.00 24 0 O2 539742 Bacillales Family XII. Incertae Sedis + 0.00 24 3 G 33986 Exiguobacterium + 0.00 19 19 S 1224749 Exiguobacterium sp. ZWU0009 + 0.00 2 0 S 132920 Exiguobacterium antarcticum + 0.00 2 2 S1 1087448 Exiguobacterium antarcticum B7 + 0.00 16 0 F 186821 Sporolactobacillaceae + 0.00 16 0 F1 663587 unclassified Sporolactobacillaceae + 0.00 16 0 S 85683 [Bacillus] selenitireducens + 0.00 16 16 S1 439292 [Bacillus] selenitireducens MLS10 + 0.00 12 0 F 186820 Listeriaceae + 0.00 12 11 G 1637 Listeria + 0.00 1 1 S 1639 Listeria monocytogenes + 0.00 8 0 F 186823 Alicyclobacillaceae + 0.00 7 0 G 29330 Alicyclobacillus + 0.00 7 0 S 405212 Alicyclobacillus acidocaldarius + 0.00 7 0 S1 1388 Alicyclobacillus acidocaldarius subsp. acidocaldarius + 0.00 7 7 S2 521098 Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 + 0.00 1 0 G 432330 Tumebacillus + 0.00 1 1 S 1903704 Tumebacillus avium + 0.00 2 0 F 186824 Thermoactinomycetaceae + 0.00 2 0 G 1677050 Novibacillus + 0.00 2 2 S 1471761 Novibacillus thermophilus + 0.08 2049 15 O 186826 Lactobacillales + 0.06 1392 0 F 186827 Aerococcaceae + 0.06 1392 42 G 1375 Aerococcus + 0.03 719 719 S 51665 Aerococcus urinaeequi + 0.03 628 628 S 1377 Aerococcus viridans + 0.00 3 3 S 87541 Aerococcus christensenii + 0.01 252 0 F 33958 Lactobacillaceae + 0.01 247 4 G 1578 Lactobacillus + 0.00 48 48 S 1590 Lactobacillus plantarum + 0.00 34 34 S 2099788 Lactobacillus sp. CBA3605 + 0.00 27 27 S 89059 Lactobacillus acidipiscis + 0.00 22 22 S 1138822 Lactobacillus curieae + 0.00 20 20 S 1604 Lactobacillus amylovorus + 0.00 19 19 S 1720083 Lactobacillus sp. HSLZ-75 + 0.00 15 0 S 109790 Lactobacillus jensenii + 0.00 15 15 S1 525329 Lactobacillus jensenii JV-V16 + 0.00 9 0 G1 655183 Lactobacillus casei group + 0.00 9 9 S 1597 Lactobacillus paracasei + 0.00 9 9 S 1599 Lactobacillus sakei + 0.00 8 8 S 1218493 Lactobacillus kullabergensis + 0.00 5 5 S 1624 Lactobacillus salivarius + 0.00 4 0 S 1603 Lactobacillus amylophilus + 0.00 4 4 S1 1423721 Lactobacillus amylophilus DSM 20533 = JCM 1125 + 0.00 3 3 S 33959 Lactobacillus johnsonii + 0.00 3 3 S 1605 Lactobacillus animalis + 0.00 3 3 S 83683 Lactobacillus amylolyticus + 0.00 3 3 S 1303590 Lactobacillus bombi + 0.00 2 2 S 375175 Lactobacillus backii + 0.00 2 2 S 267363 Lactobacillus zymae + 0.00 2 2 S 2304606 Lactobacillus sp. HBUAS52074 + 0.00 1 1 S 637971 Lactobacillus koreensis + 0.00 1 1 S 53444 Lactobacillus lindneri + 0.00 1 1 S 60520 Lactobacillus paraplantarum + 0.00 1 0 S 1579 Lactobacillus acidophilus + 0.00 1 1 S1 272621 Lactobacillus acidophilus NCFM + 0.00 1 1 S 1596 Lactobacillus gasseri + 0.00 5 0 G 1253 Pediococcus + 0.00 5 5 S 1255 Pediococcus pentosaceus + 0.01 204 0 F 1300 Streptococcaceae + 0.01 178 10 G 1301 Streptococcus + 0.00 45 45 S 1345 Streptococcus ferus + 0.00 20 20 S 1309 Streptococcus mutans + 0.00 20 20 S 1340 Streptococcus porcinus + 0.00 19 19 S 1348 Streptococcus parauberis + 0.00 16 2 S 1304 Streptococcus salivarius + 0.00 14 14 S1 1048332 Streptococcus salivarius CCHSS3 + 0.00 13 13 S 1314 Streptococcus pyogenes + 0.00 7 0 G1 119603 Streptococcus dysgalactiae group + 0.00 6 2 S 1334 Streptococcus dysgalactiae + 0.00 4 4 S1 119602 Streptococcus dysgalactiae subsp. equisimilis + 0.00 1 1 S 1336 Streptococcus equi + 0.00 5 5 S 1308 Streptococcus thermophilus + 0.00 3 3 S 1326 Streptococcus acidominimus + 0.00 2 2 S 197614 Streptococcus pasteurianus + 0.00 2 2 S 2576376 Streptococcus sp. 1643 + 0.00 2 2 S 315405 Streptococcus gallolyticus + 0.00 2 1 S 1349 Streptococcus uberis + 0.00 1 1 S1 218495 Streptococcus uberis 0140J + 0.00 2 0 S 1313 Streptococcus pneumoniae + 0.00 2 2 S1 488221 Streptococcus pneumoniae 70585 + 0.00 2 2 S 1307 Streptococcus suis + 0.00 1 0 S 102684 Streptococcus infantarius + 0.00 1 0 S1 150054 Streptococcus infantarius subsp. infantarius + 0.00 1 1 S2 1069533 Streptococcus infantarius subsp. infantarius CJ18 + 0.00 1 1 S 1316408 Streptococcus sp. HSISM1 + 0.00 1 1 S 712633 Streptococcus sp. oral taxon 431 + 0.00 1 1 S 400065 Streptococcus merionis + 0.00 1 1 S 1302 Streptococcus gordonii + 0.00 1 1 S 1811193 Streptococcus pantholopis + 0.00 1 1 S 1814128 Streptococcus halotolerans + 0.00 1 1 S 28037 Streptococcus mitis + 0.00 26 0 G 1357 Lactococcus + 0.00 21 21 S 1363 Lactococcus garvieae + 0.00 4 4 S 1364 Lactococcus piscium + 0.00 1 0 S 1358 Lactococcus lactis + 0.00 1 0 S1 1359 Lactococcus lactis subsp. cremoris + 0.00 1 1 S2 1295826 Lactococcus lactis subsp. cremoris KW2 + 0.01 130 1 F 81852 Enterococcaceae + 0.00 108 7 G 1350 Enterococcus + 0.00 29 29 S 1354 Enterococcus hirae + 0.00 25 25 S 160453 Enterococcus gilvus + 0.00 19 19 S 44008 Enterococcus cecorum + 0.00 16 16 S 53346 Enterococcus mundtii + 0.00 4 2 S 1352 Enterococcus faecium + 0.00 2 2 S1 1305849 Enterococcus faecium Aus0085 + 0.00 4 4 S 417368 Enterococcus thailandicus + 0.00 4 3 S 1351 Enterococcus faecalis + 0.00 1 1 S1 1201292 Enterococcus faecalis ATCC 29212 + 0.00 14 0 G 51668 Tetragenococcus + 0.00 6 6 S 51669 Tetragenococcus halophilus + 0.00 5 5 S 526944 Tetragenococcus osmophilus + 0.00 3 3 S 290335 Tetragenococcus koreensis + 0.00 7 0 G 2737 Vagococcus + 0.00 4 4 S 2571750 Vagococcus sp. MN-17 + 0.00 3 3 S 519472 Vagococcus teuberi + 0.00 42 0 F 81850 Leuconostocaceae + 0.00 18 4 G 1243 Leuconostoc + 0.00 7 6 S 33964 Leuconostoc citreum + 0.00 1 1 S1 349519 Leuconostoc citreum KM20 + 0.00 5 5 S 1511761 Leuconostoc suionicum + 0.00 2 0 S 1245 Leuconostoc mesenteroides + 0.00 2 2 S1 33967 Leuconostoc mesenteroides subsp. mesenteroides + 0.00 13 0 G 46255 Weissella + 0.00 6 6 S 1583 Weissella confusa + 0.00 4 4 S 2506420 Weissella sp. 26KH-42 + 0.00 2 2 S 137591 Weissella cibaria + 0.00 1 1 S 1249 Weissella paramesenteroides + 0.00 11 0 G 46254 Oenococcus + 0.00 11 0 S 336988 Oenococcus kitaharae + 0.00 11 11 S1 1045004 Oenococcus kitaharae DSM 17330 + 0.00 14 0 F 186828 Carnobacteriaceae + 0.00 8 0 G 2747 Carnobacterium + 0.00 4 4 S 1564681 Carnobacterium sp. CP1 + 0.00 2 2 S 2748 Carnobacterium divergens + 0.00 2 2 S 208596 Carnobacterium sp. 17-4 + 0.00 5 0 G 1470540 Jeotgalibaca + 0.00 3 3 S 2496265 Jeotgalibaca sp. H21T32 + 0.00 1 1 S 708126 Jeotgalibaca dankookensis + 0.00 1 1 S 1903686 Jeotgalibaca sp. PTS2502 + 0.00 1 0 G 191769 Marinilactibacillus + 0.00 1 1 S 1911586 Marinilactibacillus sp. 15R + 0.02 514 0 C 186801 Clostridia + 0.02 379 4 O 186802 Clostridiales + 0.01 184 0 F 31979 Clostridiaceae + 0.01 162 3 G 1485 Clostridium + 0.00 58 54 S 1491 Clostridium botulinum + 0.00 4 4 S1 941968 Clostridium botulinum H04402 065 + 0.00 24 24 S 1488 Clostridium acetobutylicum + 0.00 19 19 S 1561 Clostridium baratii + 0.00 11 11 S 2587161 Clostridium sp. SYSU GA15002T + 0.00 8 8 S 1502 Clostridium perfringens + 0.00 7 7 S 641107 Clostridium sp. DL-VIII + 0.00 7 0 S 1493 Clostridium cellulovorans + 0.00 7 7 S1 573061 Clostridium cellulovorans 743B + 0.00 5 5 S 36745 Clostridium saccharoperbutylacetonicum + 0.00 4 0 S 217159 Clostridium carboxidivorans + 0.00 4 4 S1 536227 Clostridium carboxidivorans P7 + 0.00 4 4 S 755731 Clostridium sp. BNL1100 + 0.00 3 3 S 1501 Clostridium pasteurianum + 0.00 2 2 S 2507159 Clostridium sp. JN-9 + 0.00 2 2 S 394958 Clostridium taeniosporum + 0.00 1 1 S 1492 Clostridium butyricum + 0.00 1 0 S 238834 Clostridium estertheticum + 0.00 1 1 S1 1552 Clostridium estertheticum subsp. estertheticum + 0.00 1 1 S 84022 Clostridium aceticum + 0.00 1 1 S 1520 Clostridium beijerinckii + 0.00 1 1 S 2320868 Clostridium sp. CT4 + 0.00 12 0 F1 189971 unclassified Clostridiaceae + 0.00 12 12 S 2082193 Clostridiaceae bacterium 14S0207 + 0.00 6 0 G 390805 Geosporobacter + 0.00 6 6 S 1424294 Geosporobacter ferrireducens + 0.00 4 0 G 1981033 Mordavella + 0.00 4 4 S 2086584 Mordavella sp. Marseille-P3756 + 0.00 66 0 F 186803 Lachnospiraceae + 0.00 34 0 G 1506553 Lachnoclostridium + 0.00 28 28 S 1871021 Lachnoclostridium phocaeense + 0.00 5 0 S 29347 [Clostridium] scindens + 0.00 5 5 S1 411468 [Clostridium] scindens ATCC 35704 + 0.00 1 0 S 84030 [Clostridium] saccharolyticum + 0.00 1 1 S1 610130 [Clostridium] saccharolyticum WM1 + 0.00 15 0 G 2569097 Anaerobutyricum + 0.00 15 15 S 39488 Anaerobutyricum hallii + 0.00 7 0 G 841 Roseburia + 0.00 5 0 S 301301 Roseburia hominis + 0.00 5 5 S1 585394 Roseburia hominis A2-183 + 0.00 2 0 S 166486 Roseburia intestinalis + 0.00 2 2 S1 536231 Roseburia intestinalis L1-82 + 0.00 7 0 F1 186928 unclassified Lachnospiraceae + 0.00 5 0 S 39491 [Eubacterium] rectale + 0.00 5 5 S1 515619 [Eubacterium] rectale ATCC 33656 + 0.00 2 2 S 712991 Lachnospiraceae bacterium oral taxon 500 + 0.00 2 0 G 830 Butyrivibrio + 0.00 2 2 S 831 Butyrivibrio fibrisolvens + 0.00 1 0 G 572511 Blautia + 0.00 1 1 S 2479767 Blautia sp. SC05B48 + 0.00 52 0 F 186804 Peptostreptococcaceae + 0.00 47 0 G 1870884 Clostridioides + 0.00 47 47 S 1496 Clostridioides difficile + 0.00 5 0 G 1481960 Peptoclostridium + 0.00 5 0 S 1731 Peptoclostridium acidaminophilum + 0.00 5 5 S1 1286171 Peptoclostridium acidaminophilum DSM 3953 + 0.00 24 0 O1 538999 Clostridiales incertae sedis + 0.00 23 0 F 543314 Clostridiales Family XIII. Incertae Sedis + 0.00 23 0 G 2060094 Aminipila + 0.00 23 23 S 2507160 Aminipila sp. JN-39 + 0.00 1 0 F 543347 Clostridiales Family XVI. Incertae Sedis + 0.00 1 0 G 178898 Carboxydocella + 0.00 1 1 S 178899 Carboxydocella thermautotrophica + 0.00 17 0 F 186807 Peptococcaceae + 0.00 6 0 G 36853 Desulfitobacterium + 0.00 4 0 S 36854 Desulfitobacterium dehalogenans + 0.00 4 4 S1 756499 Desulfitobacterium dehalogenans ATCC 51507 + 0.00 1 1 S 49338 Desulfitobacterium hafniense + 0.00 1 0 S 233055 Desulfitobacterium dichloroeliminans + 0.00 1 1 S1 871963 Desulfitobacterium dichloroeliminans LMG P-21439 + 0.00 3 0 G 1562 Desulfotomaculum + 0.00 2 0 S 1564 Desulfotomaculum ruminis + 0.00 2 2 S1 696281 Desulfotomaculum ruminis DSM 2154 + 0.00 1 0 S 59610 Desulfotomaculum reducens + 0.00 1 1 S1 349161 Desulfotomaculum reducens MI-1 + 0.00 3 0 G 79206 Desulfosporosinus + 0.00 2 0 S 885581 Desulfosporosinus acidiphilus + 0.00 2 2 S1 646529 Desulfosporosinus acidiphilus SJ4 + 0.00 1 0 S 339862 Desulfosporosinus youngiae + 0.00 1 1 S1 768710 Desulfosporosinus youngiae DSM 17734 + 0.00 3 0 G 2282742 Desulfofarcimen + 0.00 3 0 S 58138 Desulfofarcimen acetoxidans + 0.00 3 3 S1 485916 Desulfofarcimen acetoxidans DSM 771 + 0.00 2 0 G 278993 Thermincola + 0.00 2 0 S 863643 Thermincola potens + 0.00 2 2 S1 635013 Thermincola potens JR + 0.00 15 0 F 2304686 Hungateiclostridiaceae + 0.00 15 0 G 2304691 Thermoclostridium + 0.00 15 0 S 1510 Thermoclostridium stercorarium + 0.00 15 0 S1 160845 Thermoclostridium stercorarium subsp. stercorarium + 0.00 15 15 S2 1121335 Thermoclostridium stercorarium subsp. stercorarium DSM 8532 + 0.00 11 0 F 541000 Ruminococcaceae + 0.00 10 0 G 1263 Ruminococcus + 0.00 10 10 S 2564099 Ruminococcus sp. JE7A12 + 0.00 1 0 G 946234 Flavonifractor + 0.00 1 1 S 292800 Flavonifractor plautii + 0.00 5 0 F 186806 Eubacteriaceae + 0.00 4 1 G 1730 Eubacterium + 0.00 3 3 S 1736 Eubacterium limosum + 0.00 1 0 G 33951 Acetobacterium + 0.00 1 1 S 2184575 Acetobacterium sp. KB-1 + 0.00 1 0 O1 186813 unclassified Clostridiales + 0.00 1 0 O2 39779 unclassified Clostridiales (miscellaneous) + 0.00 1 1 S 2109688 Clostridiales bacterium CCNA10 + 0.00 86 0 O 53433 Halanaerobiales + 0.00 45 0 O1 387655 unclassified Halanaerobiales + 0.00 45 0 G 1769008 Anoxybacter + 0.00 45 45 S 1323375 Anoxybacter fermentans + 0.00 21 0 F 972 Halanaerobiaceae + 0.00 21 0 G 2330 Halanaerobium + 0.00 21 0 S 2331 Halanaerobium praevalens + 0.00 21 21 S1 572479 Halanaerobium praevalens DSM 2228 + 0.00 20 0 F 53434 Halobacteroidaceae + 0.00 20 0 G 42417 Halobacteroides + 0.00 20 0 S 42422 Halobacteroides halobius + 0.00 20 20 S1 748449 Halobacteroides halobius DSM 5150 + 0.00 49 0 O 68295 Thermoanaerobacterales + 0.00 20 0 F 227387 Thermodesulfobiaceae + 0.00 20 0 G 227388 Thermodesulfobium + 0.00 20 20 S 1794699 Thermodesulfobium acidiphilum + 0.00 18 0 F 543371 Thermoanaerobacterales Family III. Incertae Sedis + 0.00 18 12 G 44000 Caldicellulosiruptor + 0.00 6 0 S 52766 Caldicellulosiruptor lactoaceticus + 0.00 6 6 S1 632516 Caldicellulosiruptor lactoaceticus 6A + 0.00 9 0 O1 68296 unclassified Thermoanaerobacterales + 0.00 9 9 S 2316383 Thermoanaerobacterales bacterium SK-G1 + 0.00 2 0 F 186814 Thermoanaerobacteraceae + 0.00 2 2 G 1754 Thermoanaerobacter + 0.00 17 0 C 1737404 Tissierellia + 0.00 15 0 O 1737405 Tissierellales + 0.00 15 0 F 1570339 Peptoniphilaceae + 0.00 15 0 G 162289 Peptoniphilus + 0.00 15 15 S 54005 Peptoniphilus harei + 0.00 2 0 C1 1737407 unclassified Tissierellia + 0.00 2 0 G 1582879 Ezakiella + 0.00 2 2 S 1852374 Ezakiella massiliensis + 0.00 10 0 C 909932 Negativicutes + 0.00 5 0 O 909929 Selenomonadales + 0.00 3 0 F 1843491 Selenomonadaceae + 0.00 2 1 G 970 Selenomonas + 0.00 1 1 S 712528 Selenomonas sp. oral taxon 126 + 0.00 1 0 G 158846 Megamonas + 0.00 1 1 S 158847 Megamonas hypermegale + 0.00 2 0 F 1843490 Sporomusaceae + 0.00 2 0 G 365348 Pelosinus + 0.00 2 0 S 365349 Pelosinus fermentans + 0.00 2 2 S1 1192197 Pelosinus fermentans JBW45 + 0.00 4 0 O 1843489 Veillonellales + 0.00 4 0 F 31977 Veillonellaceae + 0.00 2 0 G 906 Megasphaera + 0.00 2 0 S 907 Megasphaera elsdenii + 0.00 2 2 S1 1064535 Megasphaera elsdenii DSM 20460 + 0.00 2 0 G 909928 Negativicoccus + 0.00 2 2 S 1702287 Negativicoccus massiliensis + 0.00 1 0 O 1843488 Acidaminococcales + 0.00 1 0 F 909930 Acidaminococcaceae + 0.00 1 1 G 33024 Phascolarctobacterium + 0.00 6 0 C 526524 Erysipelotrichia + 0.00 6 0 O 526525 Erysipelotrichales + 0.00 6 0 F 128827 Erysipelotrichaceae + 0.00 6 0 G 1647 Erysipelothrix + 0.00 6 6 S 1514105 Erysipelothrix larvae + 0.13 3258 2 P 201174 Actinobacteria + 0.13 3252 30 C 1760 Actinobacteria + 0.11 2768 12 O 85006 Micrococcales + 0.11 2569 0 F 145357 Dermacoccaceae + 0.10 2565 0 G 57495 Dermacoccus + 0.10 2565 2565 S 1274 Dermacoccus nishinomiyaensis + 0.00 4 0 G 57499 Kytococcus + 0.00 4 0 S 1276 Kytococcus sedentarius + 0.00 4 4 S1 478801 Kytococcus sedentarius DSM 20547 + 0.00 76 0 F 1268 Micrococcaceae + 0.00 56 0 G 1269 Micrococcus + 0.00 56 56 S 1270 Micrococcus luteus + 0.00 13 1 G 57493 Kocuria + 0.00 5 5 S 1049583 Kocuria indica + 0.00 4 4 S 1275 Kocuria rosea + 0.00 2 2 S 72000 Kocuria rhizophila + 0.00 1 1 S 71999 Kocuria palustris + 0.00 2 0 G 1663 Arthrobacter + 0.00 1 1 S 656366 Arthrobacter alpinus + 0.00 1 1 S 2079227 Arthrobacter sp. PGP41 + 0.00 2 0 G 1742989 Glutamicibacter + 0.00 1 1 S 37929 Glutamicibacter nicotianae + 0.00 1 1 S 1933880 Glutamicibacter halophytocola + 0.00 2 0 G 1742993 Pseudarthrobacter + 0.00 1 1 S 728066 Pseudarthrobacter equi + 0.00 1 1 S 2590775 Pseudarthrobacter sp. NIBRBAC000502772 + 0.00 1 0 G 32207 Rothia + 0.00 1 0 S 43675 Rothia mucilaginosa + 0.00 1 1 S1 680646 Rothia mucilaginosa DY-18 + 0.00 54 0 F 85023 Microbacteriaceae + 0.00 26 0 G 1573 Clavibacter + 0.00 26 0 S 28447 Clavibacter michiganensis + 0.00 26 26 S1 1874630 Clavibacter michiganensis subsp. capsici + 0.00 24 1 G 33882 Microbacterium + 0.00 12 12 S 1072463 Microbacterium lemovicicum + 0.00 5 5 S 36805 Microbacterium aurum + 0.00 2 2 S 2103230 Microbacterium sp. str. 'China' + 0.00 1 1 S 300019 Microbacterium paludicola + 0.00 1 1 S 1714373 Microbacterium sp. No. 7 + 0.00 1 1 S 2489212 Microbacterium sp. RG1 + 0.00 1 1 S 82380 Microbacterium oxydans + 0.00 1 0 G 1759331 Cnuibacter + 0.00 1 1 S 1619308 Cnuibacter physcomitrellae + 0.00 1 0 G 33877 Agromyces + 0.00 1 1 S 2498704 Agromyces sp. LHK192 + 0.00 1 0 F1 1655488 Luna cluster + 0.00 1 0 F2 1655489 Luna-1 subcluster + 0.00 1 0 G 529881 Candidatus Aquiluna + 0.00 1 1 S 1855377 Candidatus Aquiluna sp. UB-MaderosW2red + 0.00 1 0 G 1195526 Gryllotalpicola + 0.00 1 1 S 2419771 Gryllotalpicola sp. 2DFW10M-5 + 0.00 18 0 F 85021 Intrasporangiaceae + 0.00 12 0 G 53457 Janibacter + 0.00 11 11 S 857417 Janibacter indicus + 0.00 1 1 S 53458 Janibacter limosus + 0.00 3 0 G 125287 Ornithinimicrobium + 0.00 2 2 S 2283195 Ornithinimicrobium sp. AMA3305 + 0.00 1 1 S 1288636 Ornithinimicrobium flavum + 0.00 2 0 G 265976 Serinicoccus + 0.00 2 2 S 1758689 Serinicoccus sp. JLT9 + 0.00 1 0 G 267408 Arsenicicoccus + 0.00 1 1 S 1658671 Arsenicicoccus sp. oral taxon 190 + 0.00 15 0 F 85019 Brevibacteriaceae + 0.00 15 1 G 1696 Brevibacterium + 0.00 7 7 S 1136497 Brevibacterium siliguriense + 0.00 6 6 S 273384 Brevibacterium aurantiacum + 0.00 1 1 S 629680 Brevibacterium sandarakinum + 0.00 11 0 F 85022 Jonesiaceae + 0.00 11 0 G 43673 Jonesia + 0.00 11 11 S 43674 Jonesia denitrificans + 0.00 4 0 F 85016 Cellulomonadaceae + 0.00 4 0 G 1707 Cellulomonas + 0.00 3 3 S 1708 Cellulomonas fimi + 0.00 1 0 S 1711 Cellulomonas flavigena + 0.00 1 1 S1 446466 Cellulomonas flavigena DSM 20109 + 0.00 4 0 F 85020 Dermabacteraceae + 0.00 4 0 G 43668 Brachybacterium + 0.00 3 0 S 43669 Brachybacterium faecium + 0.00 3 3 S1 446465 Brachybacterium faecium DSM 4810 + 0.00 1 1 S 2017485 Brachybacterium sp. VR2415 + 0.00 3 0 F 125316 Beutenbergiaceae + 0.00 3 0 G 947525 Miniimonas + 0.00 3 3 S 2171623 Miniimonas sp. S16 + 0.00 1 0 F 85017 Promicromonosporaceae + 0.00 1 0 G 254250 Isoptericola + 0.00 1 0 S 139208 Isoptericola variabilis + 0.00 1 1 S1 743718 Isoptericola variabilis 225 + 0.00 1 0 F 145358 Bogoriellaceae + 0.00 1 0 G 154116 Georgenia + 0.00 1 1 S 2483799 Georgenia sp. ZLJ0423 + 0.00 116 0 O 85011 Streptomycetales + 0.00 116 0 F 2062 Streptomycetaceae + 0.00 116 75 G 1883 Streptomyces + 0.00 17 17 S 54571 Streptomyces venezuelae + 0.00 4 4 S 1927 Streptomyces rimosus + 0.00 4 4 S 1915 Streptomyces lincolnensis + 0.00 2 2 S 1783515 Streptomyces qaidamensis + 0.00 2 0 S 1950 Streptomyces peucetius + 0.00 2 0 S1 55158 Streptomyces peucetius subsp. caesius + 0.00 2 2 S2 316280 Streptomyces peucetius subsp. caesius ATCC 27952 + 0.00 2 0 S 1930 Streptomyces scabiei + 0.00 2 2 S1 680198 Streptomyces scabiei 87.22 + 0.00 1 1 S 1926 Streptomyces reticuli + 0.00 1 1 S 45398 Streptomyces griseoviridis + 0.00 1 1 S 2203204 Streptomyces sp. WAC 01438 + 0.00 1 0 G1 629295 Streptomyces griseus group + 0.00 1 0 G2 1482566 Streptomyces bacillaris subgroup + 0.00 1 1 S 68179 Streptomyces bacillaris + 0.00 1 1 S 1109743 Streptomyces sp. SCSIO 03032 + 0.00 1 1 S 1938841 Streptomyces sp. 2323.1 + 0.00 1 1 S 1889 Streptomyces ambofaciens + 0.00 1 1 S 68214 Streptomyces griseochromogenes + 0.00 1 1 S 146923 Streptomyces parvulus + 0.00 1 1 S 1912 Streptomyces hygroscopicus + 0.00 92 1 O 85007 Corynebacteriales + 0.00 40 1 F 1762 Mycobacteriaceae + 0.00 23 16 G 1763 Mycobacterium + 0.00 4 0 G1 77643 Mycobacterium tuberculosis complex + 0.00 3 0 S 78331 Mycobacterium canettii + 0.00 3 3 S1 1205677 Mycobacterium canettii CIPT 140070017 + 0.00 1 1 S 1773 Mycobacterium tuberculosis + 0.00 1 0 G1 120793 Mycobacterium avium complex (MAC) + 0.00 1 1 S 1764 Mycobacterium avium + 0.00 1 1 S 164757 Mycobacterium sp. JLS + 0.00 1 1 S 1879023 Mycobacterium sp. djl-10 + 0.00 12 0 G 670516 Mycobacteroides + 0.00 6 6 S 36809 Mycobacteroides abscessus + 0.00 6 6 S 404941 Mycobacteroides salmoniphilum + 0.00 4 0 G 1866885 Mycolicibacterium + 0.00 2 1 S 1772 Mycolicibacterium smegmatis + 0.00 1 1 S1 1214915 Mycolicibacterium smegmatis MKD8 + 0.00 1 1 S 1792 Mycolicibacterium chitae + 0.00 1 1 S 1797 Mycolicibacterium thermoresistibile + 0.00 31 0 F 1653 Corynebacteriaceae + 0.00 31 10 G 1716 Corynebacterium + 0.00 7 7 S 571915 Corynebacterium mustelae + 0.00 4 4 S 65058 Corynebacterium ulcerans + 0.00 2 2 S 35755 Corynebacterium kutscheri + 0.00 2 0 S 38305 Corynebacterium vitaeruminis + 0.00 2 2 S1 1224164 Corynebacterium vitaeruminis DSM 20294 + 0.00 2 2 S 2079535 Corynebacterium sp. 2184 + 0.00 1 1 S 1697 Corynebacterium ammoniagenes + 0.00 1 1 S 1725 Corynebacterium xerosis + 0.00 1 0 S 225326 Corynebacterium halotolerans + 0.00 1 1 S1 1121362 Corynebacterium halotolerans YIM 70093 = DSM 44683 + 0.00 1 1 S 1718 Corynebacterium glutamicum + 0.00 16 0 F 85025 Nocardiaceae + 0.00 14 2 G 1827 Rhodococcus + 0.00 6 5 S 37919 Rhodococcus opacus + 0.00 1 1 S1 632772 Rhodococcus opacus B4 + 0.00 2 2 S 679318 Rhodococcus sp. WMMA185 + 0.00 1 1 S 1564114 Rhodococcus sp. B7740 + 0.00 1 1 S 1830 Rhodococcus ruber + 0.00 1 1 S 1653478 Rhodococcus sp. PBTS 1 + 0.00 1 1 S 2490853 Rhodococcus sp. NJ-530 + 0.00 2 0 G 1817 Nocardia + 0.00 2 2 S 37332 Nocardia seriolae + 0.00 4 0 F 85029 Dietziaceae + 0.00 4 1 G 37914 Dietzia + 0.00 2 2 S 499555 Dietzia timorensis + 0.00 1 1 S 139021 Dietzia psychralcaliphila + 0.00 87 0 O 2037 Actinomycetales + 0.00 87 0 F 2049 Actinomycetaceae + 0.00 66 2 G 1654 Actinomyces + 0.00 32 32 S 1659 Actinomyces israelii + 0.00 27 27 S 1655 Actinomyces naeslundii + 0.00 5 5 S 1852377 Actinomyces pacaensis + 0.00 15 0 G 1069494 Trueperella + 0.00 9 9 S 1661 Trueperella pyogenes + 0.00 6 6 S 312285 Trueperella bialowiezensis + 0.00 5 0 G 1522056 Flaviflexus + 0.00 5 5 S 1282737 Flaviflexus salsibiostraticola + 0.00 1 0 G 2529408 Schaalia + 0.00 1 1 S 1660 Schaalia odontolytica + 0.00 79 0 O 85008 Micromonosporales + 0.00 79 0 F 28056 Micromonosporaceae + 0.00 76 0 G 1865 Actinoplanes + 0.00 76 76 S 113562 Actinoplanes derwentensis + 0.00 3 0 G 1873 Micromonospora + 0.00 2 2 S 479978 Micromonospora tulbaghiae + 0.00 1 1 S 1881 Micromonospora viridifaciens + 0.00 39 0 O 85009 Propionibacteriales + 0.00 30 2 F 31957 Propionibacteriaceae + 0.00 12 0 G 1743 Propionibacterium + 0.00 12 12 S 1744 Propionibacterium freudenreichii + 0.00 7 1 G 72763 Tessaracoccus + 0.00 2 2 S 399497 Tessaracoccus flavescens + 0.00 2 2 S 1332264 Tessaracoccus aquimaris + 0.00 1 1 S 1610493 Tessaracoccus flavus + 0.00 1 1 S 2161816 Tessaracoccus timonensis + 0.00 5 1 G 1912215 Acidipropionibacterium + 0.00 3 1 S 1748 Acidipropionibacterium acidipropionici + 0.00 2 2 S1 1171373 Acidipropionibacterium acidipropionici ATCC 4875 + 0.00 1 1 S 1749 Acidipropionibacterium jensenii + 0.00 3 0 G 1912216 Cutibacterium + 0.00 3 3 S 1747 Cutibacterium acnes + 0.00 1 0 G 1912217 Pseudopropionibacterium + 0.00 1 1 S 1750 Pseudopropionibacterium propionicum + 0.00 9 0 F 85015 Nocardioidaceae + 0.00 8 0 G 1839 Nocardioides + 0.00 3 3 S 2518371 Nocardioides sp. MMS17-SY207-3 + 0.00 2 2 S 449461 Nocardioides humi + 0.00 1 1 S 196162 Nocardioides sp. JS614 + 0.00 1 1 S 402297 Nocardioides daphniae + 0.00 1 1 S 2589074 Nocardioides sp. KUDC 5002 + 0.00 1 0 G 2040 Aeromicrobium + 0.00 1 1 S 2041 Aeromicrobium erythreum + 0.00 19 0 O 85004 Bifidobacteriales + 0.00 19 0 F 31953 Bifidobacteriaceae + 0.00 11 1 G 1678 Bifidobacterium + 0.00 7 0 S 1681 Bifidobacterium bifidum + 0.00 7 7 S1 702459 Bifidobacterium bifidum PRL2010 + 0.00 2 2 S 1680 Bifidobacterium adolescentis + 0.00 1 0 S 158787 Bifidobacterium scardovii + 0.00 1 1 S1 1150461 Bifidobacterium scardovii JCM 12489 = DSM 13734 + 0.00 8 0 G 2701 Gardnerella + 0.00 8 3 S 2702 Gardnerella vaginalis + 0.00 5 5 S1 553190 Gardnerella vaginalis 409-05 + 0.00 11 0 O 85010 Pseudonocardiales + 0.00 11 0 F 2070 Pseudonocardiaceae + 0.00 5 1 G 1847 Pseudonocardia + 0.00 4 0 S 240495 Pseudonocardia dioxanivorans + 0.00 4 4 S1 675635 Pseudonocardia dioxanivorans CB1190 + 0.00 4 1 G 1813 Amycolatopsis + 0.00 1 0 S 1814 Amycolatopsis methanolica + 0.00 1 1 S1 1068978 Amycolatopsis methanolica 239 + 0.00 1 1 S 129921 Amycolatopsis keratiniphila + 0.00 1 1 S 1896961 Amycolatopsis sp. AA4 + 0.00 1 0 G 1851 Saccharomonospora + 0.00 1 1 S 2528243 Saccharomonospora sp. 31sw + 0.00 1 0 G 2071 Saccharothrix + 0.00 1 0 S 103731 Saccharothrix espanaensis + 0.00 1 1 S1 1179773 Saccharothrix espanaensis DSM 44229 + 0.00 7 0 O 85013 Frankiales + 0.00 7 0 F 74712 Frankiaceae + 0.00 5 0 G 1434010 Jatrophihabitans + 0.00 5 5 S 1907575 Jatrophihabitans sp. GAS493 + 0.00 2 0 G 1854 Frankia + 0.00 1 1 S 106370 Frankia casuarinae + 0.00 1 1 S 298653 Frankia sp. EAN1pec + 0.00 2 0 O 85012 Streptosporangiales + 0.00 1 0 F 2012 Thermomonosporaceae + 0.00 1 0 G 1988 Actinomadura + 0.00 1 1 S 2591108 Actinomadura sp. WMMA1423 + 0.00 1 0 F 83676 Nocardiopsaceae + 0.00 1 0 G 104204 Streptomonospora + 0.00 1 1 S 2498135 Streptomonospora sp. M2 + 0.00 1 0 O 414714 Catenulisporales + 0.00 1 0 F 414877 Catenulisporaceae + 0.00 1 0 G 414878 Catenulispora + 0.00 1 0 S 304895 Catenulispora acidiphila + 0.00 1 1 S1 479433 Catenulispora acidiphila DSM 44928 + 0.00 1 0 O 1643682 Geodermatophilales + 0.00 1 0 F 85030 Geodermatophilaceae + 0.00 1 0 G 88138 Modestobacter + 0.00 1 1 S 477641 Modestobacter marinus + 0.00 3 0 C 84998 Coriobacteriia + 0.00 3 0 O 1643822 Eggerthellales + 0.00 3 0 F 1643826 Eggerthellaceae + 0.00 2 0 G 644652 Gordonibacter + 0.00 2 2 S 1841863 Gordonibacter massiliensis + 0.00 1 0 G 447020 Adlercreutzia + 0.00 1 0 S 446660 Adlercreutzia equolifaciens + 0.00 1 1 S1 1384484 Adlercreutzia equolifaciens DSM 19450 + 0.00 1 0 C 84992 Acidimicrobiia + 0.00 1 0 O 84993 Acidimicrobiales + 0.00 1 0 F 84994 Acidimicrobiaceae + 0.00 1 0 G 53634 Acidimicrobium + 0.00 1 0 S 53635 Acidimicrobium ferrooxidans + 0.00 1 1 S1 525909 Acidimicrobium ferrooxidans DSM 10331 + 0.02 490 0 D2 1798711 Cyanobacteria/Melainabacteria group + 0.02 490 8 P 1117 Cyanobacteria + 0.01 197 1 P1 1301283 Oscillatoriophycideae + 0.00 108 0 O 1150 Oscillatoriales + 0.00 81 0 F 1892254 Oscillatoriaceae + 0.00 50 0 G 1158 Oscillatoria + 0.00 45 0 S 482564 Oscillatoria nigro-viridis + 0.00 45 45 S1 179408 Oscillatoria nigro-viridis PCC 7112 + 0.00 5 0 S 118323 Oscillatoria acuminata + 0.00 5 5 S1 56110 Oscillatoria acuminata PCC 6304 + 0.00 31 0 G 1155738 Moorea + 0.00 31 3 S 1155739 Moorea producens + 0.00 22 22 S1 1458985 Moorea producens PAL-8-15-08-1 + 0.00 6 6 S1 1454205 Moorea producens JHB + 0.00 16 0 F 1892255 Gomontiellaceae + 0.00 16 0 G 241421 Crinalium + 0.00 16 0 S 241425 Crinalium epipsammum + 0.00 16 16 S1 1173022 Crinalium epipsammum PCC 9333 + 0.00 9 0 F 1892252 Microcoleaceae + 0.00 6 0 G 54304 Planktothrix + 0.00 6 0 S 1160 Planktothrix agardhii + 0.00 6 6 S1 388467 Planktothrix agardhii NIVA-CYA 126/8 + 0.00 2 0 G 35823 Arthrospira + 0.00 2 0 S 118562 Arthrospira platensis + 0.00 2 2 S1 1738638 Arthrospira platensis YZ + 0.00 1 0 G 1205 Trichodesmium + 0.00 1 0 S 1206 Trichodesmium erythraeum + 0.00 1 1 S1 203124 Trichodesmium erythraeum IMS101 + 0.00 2 0 F 1892249 Cyanothecaceae + 0.00 2 0 G 43988 Cyanothece + 0.00 2 2 S 395961 Cyanothece sp. PCC 7425 + 0.00 88 0 O 1118 Chroococcales + 0.00 35 0 F 1890449 Microcystaceae + 0.00 35 16 G 1125 Microcystis + 0.00 19 19 S 1967666 Microcystis sp. MC19 + 0.00 31 0 F 1890464 Chroococcaceae + 0.00 29 0 G 669357 Geminocystis + 0.00 13 0 S 669359 Geminocystis herdmanii + 0.00 13 13 S1 113355 Geminocystis herdmanii PCC 6308 + 0.00 13 13 S 1617448 Geminocystis sp. NIES-3709 + 0.00 3 3 S 1615909 Geminocystis sp. NIES-3708 + 0.00 2 0 G 102231 Gloeocapsa + 0.00 2 2 S 1173026 Gloeocapsa sp. PCC 7428 + 0.00 13 0 F 1890450 Aphanothecaceae + 0.00 7 0 G 2546365 Rippkaea + 0.00 7 7 S 2546366 Rippkaea orientalis + 0.00 6 2 G 28070 Gloeothece + 0.00 4 0 S 2546359 Gloeothece verrucosa + 0.00 4 4 S1 497965 Gloeothece verrucosa PCC 7822 + 0.00 9 0 F 1890452 Cyanobacteriaceae + 0.00 9 0 G 102234 Cyanobacterium + 0.00 9 0 S 379064 Cyanobacterium aponinum + 0.00 9 9 S1 755178 Cyanobacterium aponinum PCC 10605 + 0.01 165 39 O 1161 Nostocales + 0.00 56 19 F 1162 Nostocaceae + 0.00 37 1 G 1177 Nostoc + 0.00 14 14 S 28072 Nostoc sp. PCC 7524 + 0.00 10 0 S 374162 Nostoc carneum + 0.00 10 10 S1 1973483 Nostoc carneum NIES-2107 + 0.00 9 9 S 1261031 Nostoc sp. 'Peltigera membranacea cyanobiont' N6 + 0.00 3 3 S 317936 Nostoc sp. PCC 7107 + 0.00 42 0 F 1185 Rivulariaceae + 0.00 41 1 G 1186 Calothrix + 0.00 13 0 S 1973486 Calothrix parasitica + 0.00 13 13 S1 1973488 Calothrix parasitica NIES-267 + 0.00 10 10 S 1954171 Calothrix sp. NIES-2098 + 0.00 9 9 S 2005462 Calothrix sp. NIES-3974 + 0.00 5 5 S 1337936 Calothrix sp. 336/3 + 0.00 1 0 S 32054 Calothrix parietina + 0.00 1 1 S1 1170562 Calothrix sp. PCC 6303 + 0.00 1 1 S 99598 Calothrix sp. PCC 7507 + 0.00 1 0 S 938406 Calothrix brevissima + 0.00 1 1 S1 1973478 Calothrix brevissima NIES-22 + 0.00 1 0 G 373984 Rivularia + 0.00 1 1 S 373994 Rivularia sp. PCC 7116 + 0.00 13 0 F 1892263 Hapalosiphonaceae + 0.00 13 0 G 1190 Fischerella + 0.00 9 9 S 1752063 Fischerella sp. NIES-3754 + 0.00 4 4 S 2005456 Fischerella sp. NIES-4106 + 0.00 10 0 O1 201821 unclassified Nostocales + 0.00 10 0 O2 1219117 unclassified Nostocales (miscellaneous) + 0.00 10 10 S 1940762 Nostocales cyanobacterium HT-58-2 + 0.00 4 0 F 1182 Scytonemataceae + 0.00 4 0 G 1203 Scytonema + 0.00 4 4 S 1137095 Scytonema sp. HK-05 + 0.00 1 0 F 1892259 Aphanizomenonaceae + 0.00 1 0 G 752201 Sphaerospermopsis + 0.00 1 0 S 289435 Sphaerospermopsis kisseleviana + 0.00 1 1 S1 1973480 Sphaerospermopsis kisseleviana NIES-73 + 0.00 108 0 O 1890424 Synechococcales + 0.00 45 0 F 1890426 Synechococcaceae + 0.00 42 0 G 1129 Synechococcus + 0.00 35 35 S 64471 Synechococcus sp. CC9311 + 0.00 3 3 S 195250 Synechococcus sp. PCC 7336 + 0.00 2 2 S 1827144 Synechococcus sp. NIES-970 + 0.00 2 2 S 316279 Synechococcus sp. CC9902 + 0.00 2 1 G 146785 Thermosynechococcus + 0.00 1 1 S 1394889 Thermosynechococcus sp. NK55a + 0.00 1 0 G 13034 Dactylococcopsis + 0.00 1 0 S 292566 Dactylococcopsis salina + 0.00 1 1 S1 13035 Dactylococcopsis salina PCC 8305 + 0.00 34 0 F 1890438 Leptolyngbyaceae + 0.00 34 0 G 47251 Leptolyngbya + 0.00 33 33 S 1752064 Leptolyngbya sp. NIES-3755 + 0.00 1 1 S 111781 Leptolyngbya sp. PCC 7376 + 0.00 20 0 F 1213 Prochloraceae + 0.00 20 13 G 1218 Prochlorococcus + 0.00 7 0 S 1219 Prochlorococcus marinus + 0.00 4 4 S1 93060 Prochlorococcus marinus str. MIT 9215 + 0.00 3 0 S1 142554 Prochlorococcus marinus subsp. marinus + 0.00 3 3 S2 167539 Prochlorococcus marinus subsp. marinus str. CCMP1375 + 0.00 8 0 F 1890431 Chamaesiphonaceae + 0.00 8 0 G 217161 Chamaesiphon + 0.00 8 0 S 1173032 Chamaesiphon minutus + 0.00 8 8 S1 1173020 Chamaesiphon minutus PCC 6605 + 0.00 1 0 F 1890428 Merismopediaceae + 0.00 1 1 G 1142 Synechocystis + 0.00 7 0 O 52604 Pleurocapsales + 0.00 7 0 F 1890498 Dermocarpellaceae + 0.00 7 0 G 102115 Stanieria + 0.00 4 4 S 1807358 Stanieria sp. NIES-3757 + 0.00 3 0 S 102116 Stanieria cyanosphaera + 0.00 3 3 S1 111780 Stanieria cyanosphaera PCC 7437 + 0.00 3 0 O 1955042 Gloeoemargaritales + 0.00 3 0 F 1955043 Gloeomargaritaceae + 0.00 3 0 G 1188227 Gloeomargarita + 0.00 3 0 S 1188228 Gloeomargarita lithophora + 0.00 3 3 S1 1188229 Gloeomargarita lithophora Alchichica-D10 + 0.00 2 0 P1 34079 unclassified Cyanobacteria + 0.00 2 0 P2 1983111 unclassified Cyanobacteria (miscellaneous) + 0.00 1 0 S 718217 cyanobacterium endosymbiont of Epithemia turgida + 0.00 1 1 S1 1228987 cyanobacterium endosymbiont of Epithemia turgida isolate EtSB Lake Yunoko + 0.00 1 1 S 1763363 cyanobacterium endosymbiont of Rhopalodia gibberula + 0.01 217 0 P 544448 Tenericutes + 0.01 217 0 C 31969 Mollicutes + 0.01 179 0 O 2085 Mycoplasmatales + 0.01 179 0 F 2092 Mycoplasmataceae + 0.01 166 0 G 2093 Mycoplasma + 0.00 93 93 S 142649 Mycoplasma phocicerebrale + 0.00 51 51 S 29559 Mycoplasma hyosynoviae + 0.00 7 0 S 28227 Mycoplasma penetrans + 0.00 7 7 S1 272633 Mycoplasma penetrans HF-2 + 0.00 5 5 S 1749074 Mycoplasma sp. (ex Biomphalaria glabrata) + 0.00 2 2 S 2112 Mycoplasma bovigenitalium + 0.00 2 2 S 29553 Mycoplasma bovirhinis + 0.00 2 0 S 29501 Mycoplasma haemofelis + 0.00 2 2 S1 941640 Mycoplasma haemofelis str. Langford 1 + 0.00 2 2 S 114881 Mycoplasma columbinum + 0.00 1 0 G1 656088 Mycoplasma mycoides group + 0.00 1 0 S 2102 Mycoplasma mycoides + 0.00 1 1 S1 40477 Mycoplasma mycoides subsp. capri + 0.00 1 1 S 171281 Mycoplasma citelli + 0.00 13 0 G 2129 Ureaplasma + 0.00 13 13 S 134821 Ureaplasma parvum + 0.00 31 0 O 186329 Acholeplasmatales + 0.00 31 0 F 2146 Acholeplasmataceae + 0.00 25 0 G 2147 Acholeplasma + 0.00 20 20 S 2148 Acholeplasma laidlawii + 0.00 5 0 S 38986 Acholeplasma palmae + 0.00 5 5 S1 1318466 Acholeplasma palmae J233 + 0.00 6 0 G 33926 Candidatus Phytoplasma + 0.00 6 0 G1 85620 Candidatus Phytoplasma asteris + 0.00 6 0 S 229545 Aster yellows witches'-broom phytoplasma + 0.00 6 6 S1 322098 Aster yellows witches'-broom phytoplasma AYWB + 0.00 7 0 O 186328 Entomoplasmatales + 0.00 7 0 F 2131 Spiroplasmataceae + 0.00 7 0 G 2132 Spiroplasma + 0.00 4 0 S 216945 Spiroplasma syrphidicola + 0.00 4 4 S1 1276229 Spiroplasma syrphidicola EA-1 + 0.00 3 0 S 216936 Spiroplasma diminutum + 0.00 3 3 S1 1276221 Spiroplasma diminutum CUAS-1 + 0.00 23 0 P 1297 Deinococcus-Thermus + 0.00 23 0 C 188787 Deinococci + 0.00 23 0 O 118964 Deinococcales + 0.00 23 0 F 183710 Deinococcaceae + 0.00 23 2 G 1298 Deinococcus + 0.00 18 0 S 310783 Deinococcus deserti + 0.00 18 18 S1 546414 Deinococcus deserti VCD115 + 0.00 2 2 S 980427 Deinococcus wulumuqiensis + 0.00 1 0 S 502394 Deinococcus gobiensis + 0.00 1 1 S1 745776 Deinococcus gobiensis I-0 + 0.00 5 0 P 200795 Chloroflexi + 0.00 5 0 C 32061 Chloroflexia + 0.00 5 0 O 32064 Chloroflexales + 0.00 5 0 O1 1508594 Chloroflexineae + 0.00 5 0 F 1106 Chloroflexaceae + 0.00 5 0 G 1107 Chloroflexus + 0.00 5 5 S 1108 Chloroflexus aurantiacus + 0.05 1234 0 D1 1783270 FCB group + 0.05 1234 2 D2 68336 Bacteroidetes/Chlorobi group + 0.05 1191 26 P 976 Bacteroidetes + 0.03 733 0 C 117743 Flavobacteriia + 0.03 733 0 O 200644 Flavobacteriales + 0.03 715 33 F 49546 Flavobacteriaceae + 0.01 161 29 G 59732 Chryseobacterium + 0.00 30 30 S 536441 Chryseobacterium taklimakanense + 0.00 16 16 S 1493872 Chryseobacterium shandongense + 0.00 16 16 S 1324352 Chryseobacterium gallinarum + 0.00 14 14 S 2497456 Chryseobacterium sp. 17S1E7 + 0.00 14 14 S 651561 Chryseobacterium arthrosphaerae + 0.00 9 9 S 2487064 Chryseobacterium sp. G0186 + 0.00 6 6 S 253 Chryseobacterium indologenes + 0.00 4 4 S 1124835 Chryseobacterium carnipullorum + 0.00 4 4 S 2039166 Chryseobacterium sp. 6424 + 0.00 4 4 S 1685010 Chryseobacterium glaciei + 0.00 4 4 S 266748 Chryseobacterium antarcticum + 0.00 3 3 S 1241979 Chryseobacterium carnis + 0.00 2 2 S 246 Chryseobacterium balustinum + 0.00 2 2 S 266749 Chryseobacterium jeonii + 0.00 1 1 S 1265445 Chryseobacterium camelliae + 0.00 1 1 S 112234 Chryseobacterium joostei + 0.00 1 1 S 2487063 Chryseobacterium sp. G0162 + 0.00 1 1 S 2547600 Chryseobacterium sp. NBC122 + 0.00 119 0 G 237 Flavobacterium + 0.00 86 86 S 996 Flavobacterium columnare + 0.00 9 0 S 55197 Flavobacterium branchiophilum + 0.00 9 9 S1 1034807 Flavobacterium branchiophilum FL-15 + 0.00 7 7 S 2478552 Flavobacterium sp. 140616W15 + 0.00 5 5 S 2183896 Flavobacterium crocinum + 0.00 4 4 S 1492737 Flavobacterium gilvum + 0.00 4 4 S 2162713 Flavobacterium magnum + 0.00 3 3 S 2175091 Flavobacterium album + 0.00 1 1 S 2249356 Flavobacterium sp. HYN0086 + 0.00 43 38 G 308865 Elizabethkingia + 0.00 2 2 S 1117645 Elizabethkingia anophelis + 0.00 2 2 S 2575699 Elizabethkingia sp. 2-6 + 0.00 1 1 S 2583851 Elizabethkingia sp. JS20170427COW + 0.00 42 0 G 225842 Formosa + 0.00 33 0 S 320324 Formosa agariphila + 0.00 33 33 S1 1347342 Formosa agariphila KMM 3901 + 0.00 9 9 S 1798225 Formosa sp. Hel1_31_208 + 0.00 39 0 G 292691 Gramella + 0.00 19 0 S 411153 Gramella forsetii + 0.00 19 19 S1 411154 Gramella forsetii KT0803 + 0.00 19 19 S 2126553 Gramella sp. SH35 + 0.00 1 0 S 1486245 Gramella flava + 0.00 1 1 S1 1229726 Gramella flava JLT2011 + 0.00 34 0 G 28250 Ornithobacterium + 0.00 34 34 S 28251 Ornithobacterium rhinotracheale + 0.00 34 0 G 52959 Polaribacter + 0.00 19 19 S 996801 Polaribacter reichenbachii + 0.00 11 11 S 1312072 Polaribacter sp. SA4-12 + 0.00 3 3 S 1855336 Polaribacter sp. KT25b + 0.00 1 1 S 2058137 Polaribacter sp. ALD11 + 0.00 26 0 G 286104 Winogradskyella + 0.00 20 20 S 1249933 Winogradskyella sp. RHA_55 + 0.00 5 5 S 754417 Winogradskyella sp. PC-19 + 0.00 1 1 S 1936080 Winogradskyella sp. J14-2 + 0.00 26 0 G 143222 Salegentibacter + 0.00 26 26 S 143223 Salegentibacter salegens + 0.00 21 0 G 252356 Maribacter + 0.00 11 11 S 1836467 Maribacter sp. T28 + 0.00 10 10 S 313603 Maribacter sp. HTCC2170 + 0.00 18 6 G 363408 Nonlabens + 0.00 8 8 S 1476901 Nonlabens sp. MIC269 + 0.00 2 0 S 328515 Nonlabens dokdonensis + 0.00 2 2 S1 592029 Nonlabens dokdonensis DSW-6 + 0.00 1 1 S 1336802 Nonlabens sp. Hel1_33_55 + 0.00 1 1 S 2496866 Nonlabens sp. MJ115 + 0.00 18 0 F1 61432 unclassified Flavobacteriaceae + 0.00 6 6 S 1871037 Flavobacteriaceae bacterium + 0.00 5 5 S 2583587 Flavobacteriaceae bacterium F202Z8 + 0.00 3 3 S 1250295 Flavobacteriaceae bacterium MAR_2010_188 + 0.00 2 2 S 1150389 Flavobacteriaceae bacterium UJ101 + 0.00 1 1 S 531844 Flavobacteriaceae bacterium 3519-10 + 0.00 1 1 S 2584122 Flavobacteriaceae bacterium 10Alg115 + 0.00 10 0 G 417127 Zunongwangia + 0.00 10 0 S 398743 Zunongwangia profunda + 0.00 10 10 S1 655815 Zunongwangia profunda SM-A87 + 0.00 9 0 G 501783 Cloacibacterium + 0.00 9 9 S 237258 Cloacibacterium normanense + 0.00 9 3 G 1016 Capnocytophaga + 0.00 4 4 S 45243 Capnocytophaga haemolytica + 0.00 2 2 S 1705617 Capnocytophaga sp. oral taxon 323 + 0.00 8 0 G 358023 Lutibacter + 0.00 7 7 S 1622118 Lutibacter profundi + 0.00 1 1 S 1850246 Lutibacter sp. LPB0138 + 0.00 6 0 G 527198 Mariniflexile + 0.00 6 6 S 2027857 Mariniflexile sp. TRM1-10 + 0.00 6 0 G 104264 Cellulophaga + 0.00 6 0 S 76594 Cellulophaga baltica + 0.00 6 6 S1 1348585 Cellulophaga baltica NN016038 + 0.00 6 0 G 1649495 Seonamhaeicola + 0.00 6 6 S 1936081 Seonamhaeicola sp. S2-3 + 0.00 6 0 G 221065 Kordia + 0.00 6 6 S 2282170 Kordia sp. SMS9 + 0.00 5 0 G 178469 Arenibacter + 0.00 5 5 S 616991 Arenibacter algicola + 0.00 5 0 G 444459 Flagellimonas + 0.00 5 5 S 1383885 Flagellimonas sp. HME9304 + 0.00 5 0 G 216431 Croceibacter + 0.00 5 0 S 313588 Croceibacter atlanticus + 0.00 5 5 S1 216432 Croceibacter atlanticus HTCC2559 + 0.00 5 0 G 290174 Aquimarina + 0.00 3 3 S 1714848 Aquimarina sp. AD1 + 0.00 1 1 S 1714849 Aquimarina sp. AD10 + 0.00 1 1 S 1714860 Aquimarina sp. BL5 + 0.00 4 0 G 326319 Dokdonia + 0.00 4 4 S 983548 Dokdonia sp. 4H-3-7-5 + 0.00 3 0 G 153265 Aequorivita + 0.00 3 3 S 2494375 Aequorivita sp. H23M31 + 0.00 3 0 G 104267 Tenacibaculum + 0.00 1 1 S 754423 Tenacibaculum sp. SZ-18 + 0.00 1 1 S 1850252 Tenacibaculum todarodis + 0.00 1 1 S 2358479 Tenacibaculum sp. DSM 106434 + 0.00 2 0 G 111500 Muricauda + 0.00 2 0 S 111501 Muricauda ruestringensis + 0.00 2 2 S1 886377 Muricauda ruestringensis DSM 13258 + 0.00 2 0 G 1176327 Aureitalea + 0.00 2 2 S 2094025 Aureitalea sp. RR4-38 + 0.00 2 0 G 1518147 Wenyingzhuangia + 0.00 2 2 S 1790137 Wenyingzhuangia fucanilytica + 0.00 2 0 G 336276 Olleya + 0.00 2 2 S 2058135 Olleya sp. Bg11-27 + 0.00 1 0 G 1013 Weeksella + 0.00 1 1 S 1014 Weeksella virosa + 0.00 1 1 G 76831 Myroides + 0.00 1 0 G 291183 Lacinutrix + 0.00 1 1 S 2057808 Lacinutrix sp. Bg11-31 + 0.00 12 0 F 246874 Cryomorphaceae + 0.00 12 0 G 267986 Owenweeksia + 0.00 12 0 S 253245 Owenweeksia hongkongensis + 0.00 12 12 S1 926562 Owenweeksia hongkongensis DSM 17368 + 0.00 6 0 F 39782 Blattabacteriaceae + 0.00 6 0 G 34098 Blattabacterium + 0.00 4 4 S 1186051 Blattabacterium sp. (Blaberus giganteus) + 0.00 1 1 S 164514 Blattabacterium punctulatus + 0.00 1 0 S 1653831 Blattabacterium cuenoti + 0.00 1 1 S1 1229512 Blattabacterium cuenoti BPAA + 0.01 180 0 C 200643 Bacteroidia + 0.01 154 0 O 171549 Bacteroidales + 0.00 65 0 F 815 Bacteroidaceae + 0.00 65 30 G 816 Bacteroides + 0.00 21 21 S 817 Bacteroides fragilis + 0.00 8 0 S 818 Bacteroides thetaiotaomicron + 0.00 8 8 S1 226186 Bacteroides thetaiotaomicron VPI-5482 + 0.00 4 0 S 290053 Bacteroides helcogenes + 0.00 4 4 S1 693979 Bacteroides helcogenes P 36-108 + 0.00 2 2 S 47678 Bacteroides caccae + 0.00 65 0 F 171552 Prevotellaceae + 0.00 65 0 G 838 Prevotella + 0.00 18 18 S 28131 Prevotella intermedia + 0.00 18 0 S 589437 Prevotella scopos + 0.00 18 18 S1 1236518 Prevotella scopos JCM 17725 + 0.00 15 15 S 28132 Prevotella melaninogenica + 0.00 14 0 S 839 Prevotella ruminicola + 0.00 14 14 S1 264731 Prevotella ruminicola 23 + 0.00 9 0 F 171551 Porphyromonadaceae + 0.00 8 0 G 307628 Petrimonas + 0.00 8 8 S 1642646 Petrimonas mucosa + 0.00 1 0 G 1784836 Fermentimonas + 0.00 1 1 S 1562970 Fermentimonas caenicola + 0.00 8 0 F 2005523 Paludibacteraceae + 0.00 8 0 G 346096 Paludibacter + 0.00 8 0 S 185300 Paludibacter propionicigenes + 0.00 8 8 S1 694427 Paludibacter propionicigenes WB4 + 0.00 7 0 F 2005525 Tannerellaceae + 0.00 7 0 G 195950 Tannerella + 0.00 7 6 S 28112 Tannerella forsythia + 0.00 1 1 S1 1307832 Tannerella forsythia 3313 + 0.00 26 0 O 1970189 Marinilabiliales + 0.00 20 0 F 1471398 Prolixibacteraceae + 0.00 20 0 G 1471399 Draconibacterium + 0.00 20 20 S 1168034 Draconibacterium orientale + 0.00 4 0 F 558415 Marinilabiliaceae + 0.00 4 0 G 1193324 Alkalitalea + 0.00 4 4 S 889453 Alkalitalea saponilacus + 0.00 2 0 F 1970190 Salinivirgaceae + 0.00 2 0 G 1970191 Salinivirga + 0.00 2 2 S 1307839 Salinivirga cyanobacteriivorans + 0.01 135 0 C 768503 Cytophagia + 0.01 135 0 O 768507 Cytophagales + 0.00 36 0 F 89373 Cytophagaceae + 0.00 31 0 G 107 Spirosoma + 0.00 23 23 S 1211326 Spirosoma aerolatum + 0.00 7 7 S 2057025 Spirosoma pollinicola + 0.00 1 1 S 1178516 Spirosoma montaniterrae + 0.00 3 0 G 861914 Fibrella + 0.00 3 3 S 1834519 Fibrella sp. ES10-3-2-2 + 0.00 1 0 G 105 Runella + 0.00 1 1 S 2268026 Runella sp. SP2 + 0.00 1 0 G 2173039 Arcticibacterium + 0.00 1 1 S 1784714 Arcticibacterium luteifluviistationis + 0.00 34 0 F 1853232 Hymenobacteraceae + 0.00 28 0 G 89966 Hymenobacter + 0.00 17 17 S 1356852 Hymenobacter sp. APR13 + 0.00 8 8 S 1385664 Hymenobacter sp. DG25B + 0.00 3 3 S 2319843 Hymenobacter sp. sh-6 + 0.00 3 0 G 323449 Pontibacter + 0.00 3 3 S 2571030 Pontibacter sp. SGAir0037 + 0.00 3 0 G 1379908 Rufibacter + 0.00 3 3 S 1379910 Rufibacter sp. DG31D + 0.00 22 0 F 563798 Cyclobacteriaceae + 0.00 15 0 G 246875 Algoriphagus + 0.00 15 15 S 1727163 Algoriphagus sp. M8-2 + 0.00 5 0 G 280472 Aquiflexum + 0.00 5 0 S 280473 Aquiflexum balticum + 0.00 5 5 S1 758820 Aquiflexum balticum DSM 16537 + 0.00 1 0 G 68288 Cyclobacterium + 0.00 1 0 S 104 Cyclobacterium marinum + 0.00 1 1 S1 880070 Cyclobacterium marinum DSM 745 + 0.00 1 0 G 390846 Echinicola + 0.00 1 1 S 2591634 Echinicola sp. LN3S3 + 0.00 22 0 O1 1124781 unclassified Cytophagales + 0.00 22 0 O2 1751870 unclassified Cytophagales (miscellaneous) + 0.00 22 22 S 1945892 Cytophagales bacterium TFI 002 + 0.00 21 0 F 200667 Flammeovirgaceae + 0.00 17 0 G 59739 Flammeovirga + 0.00 14 14 S 1191459 Flammeovirga sp. MY04 + 0.00 3 3 S 2494373 Flammeovirga sp. L12M1 + 0.00 4 0 F1 340671 unclassified Flammeovirgaceae + 0.00 4 4 S 1257021 Flammeovirgaceae bacterium 311 + 0.00 103 0 C 117747 Sphingobacteriia + 0.00 103 0 O 200666 Sphingobacteriales + 0.00 103 0 F 84566 Sphingobacteriaceae + 0.00 45 0 G 28453 Sphingobacterium + 0.00 37 37 S 1933220 Sphingobacterium sp. B29 + 0.00 3 3 S 743722 Sphingobacterium sp. 21 + 0.00 3 3 S 1538644 Sphingobacterium sp. ML3W + 0.00 1 1 S 1010 Sphingobacterium mizutaii + 0.00 1 1 S 2557994 Sphingobacterium sp. CZ-2 + 0.00 37 0 G 423349 Mucilaginibacter + 0.00 13 13 S 2305508 Mucilaginibacter sp. HYN0043 + 0.00 11 0 S 423351 Mucilaginibacter paludis + 0.00 11 11 S1 714943 Mucilaginibacter paludis DSM 18603 + 0.00 5 5 S 652787 Mucilaginibacter mallensis + 0.00 4 4 S 1234841 Mucilaginibacter sp. BJC16-A31 + 0.00 4 4 S 1300914 Mucilaginibacter sp. PAMC 26640 + 0.00 21 0 G 84567 Pedobacter + 0.00 12 12 S 1727164 Pedobacter sp. PACM 27299 + 0.00 4 0 S 984 Pedobacter heparinus + 0.00 4 4 S1 485917 Pedobacter heparinus DSM 2366 + 0.00 4 4 S 2482728 Pedobacter sp. G11 + 0.00 1 1 S 430522 Pedobacter steynii + 0.00 7 0 C 1853228 Chitinophagia + 0.00 7 0 O 1853229 Chitinophagales + 0.00 7 0 F 563835 Chitinophagaceae + 0.00 4 0 G 1769012 Arachidicoccus + 0.00 4 4 S 2341117 Arachidicoccus sp. KIS59-12 + 0.00 1 0 G 379899 Niabella + 0.00 1 1 S 1176587 Niabella ginsenosidivorans + 0.00 1 0 G 398041 Flavisolibacter + 0.00 1 1 S 2502779 Flavisolibacter sp. 17J28-1 + 0.00 1 0 G 1884792 Pseudoflavitalea + 0.00 1 1 S 2315862 Pseudoflavitalea sp. 5GH32-13 + 0.00 5 0 C 1937959 Saprospiria + 0.00 5 0 O 1936988 Saprospirales + 0.00 5 0 F 89374 Saprospiraceae + 0.00 5 0 G 1007 Saprospira + 0.00 5 0 S 1008 Saprospira grandis + 0.00 5 5 S1 984262 Saprospira grandis str. Lewin + 0.00 2 0 O 1100069 Bacteroidetes Order II. Incertae sedis + 0.00 2 0 F 563843 Rhodothermaceae + 0.00 1 0 G 29548 Rhodothermus + 0.00 1 1 S 29549 Rhodothermus marinus + 0.00 1 0 G 146918 Salinibacter + 0.00 1 1 S 146919 Salinibacter ruber + 0.00 26 0 P 1134404 Ignavibacteriae + 0.00 26 0 C 795747 Ignavibacteria + 0.00 26 0 O 795748 Ignavibacteriales + 0.00 26 0 F 795749 Ignavibacteriaceae + 0.00 26 0 G 795750 Ignavibacterium + 0.00 26 0 S 591197 Ignavibacterium album + 0.00 26 26 S1 945713 Ignavibacterium album JCM 16511 + 0.00 13 0 P 1090 Chlorobi + 0.00 13 0 C 191410 Chlorobia + 0.00 13 0 O 191411 Chlorobiales + 0.00 13 0 F 191412 Chlorobiaceae + 0.00 6 0 G 1101 Prosthecochloris + 0.00 4 4 S 1868325 Prosthecochloris sp. CIB 2401 + 0.00 2 2 S 1974213 Prosthecochloris sp. HL-130-GSB + 0.00 5 0 G 256319 Chlorobaculum + 0.00 4 0 S 274539 Chlorobaculum parvum + 0.00 4 4 S1 517417 Chlorobaculum parvum NCIB 8327 + 0.00 1 1 S 274537 Chlorobaculum limnaeum + 0.00 1 0 G 100715 Chloroherpeton + 0.00 1 0 S 100716 Chloroherpeton thalassium + 0.00 1 1 S1 517418 Chloroherpeton thalassium ATCC 35110 + 0.00 1 0 F1 274493 Chlorobium/Pelodictyon group + 0.00 1 0 G 1099 Pelodictyon + 0.00 1 0 S 34090 Pelodictyon phaeoclathratiforme + 0.00 1 1 S1 324925 Pelodictyon phaeoclathratiforme BU-1 + 0.00 2 0 P 1936987 Balneolaeota + 0.00 2 0 P1 2489366 unclassified Balneolaeota + 0.00 2 0 G 2489367 Candidatus Cyclonatronum + 0.00 2 2 S 1457365 Candidatus Cyclonatronum proteinivorum + 0.01 180 0 P 32066 Fusobacteria + 0.01 180 0 C 203490 Fusobacteriia + 0.01 180 0 O 203491 Fusobacteriales + 0.01 180 0 F 203492 Fusobacteriaceae + 0.01 177 26 G 848 Fusobacterium + 0.00 78 0 S 851 Fusobacterium nucleatum + 0.00 33 33 S1 76859 Fusobacterium nucleatum subsp. animalis + 0.00 28 28 S1 76857 Fusobacterium nucleatum subsp. polymorphum + 0.00 17 5 S1 76856 Fusobacterium nucleatum subsp. nucleatum + 0.00 12 12 S2 525283 Fusobacterium nucleatum subsp. nucleatum ATCC 23726 + 0.00 54 0 S 1583098 Fusobacterium hwasookii + 0.00 54 54 S1 1307443 Fusobacterium hwasookii ChDC F206 + 0.00 15 0 S 859 Fusobacterium necrophorum + 0.00 15 15 S1 143387 Fusobacterium necrophorum subsp. funduliforme + 0.00 2 2 S 856 Fusobacterium varium + 0.00 1 0 S 850 Fusobacterium mortiferum + 0.00 1 1 S1 469616 Fusobacterium mortiferum ATCC 9817 + 0.00 1 1 S 861 Fusobacterium ulcerans + 0.00 3 0 G 167639 Ilyobacter + 0.00 3 0 S 167642 Ilyobacter polytropus + 0.00 3 3 S1 572544 Ilyobacter polytropus DSM 2926 + 0.00 111 0 P 203691 Spirochaetes + 0.00 111 0 C 203692 Spirochaetia + 0.00 49 0 O 136 Spirochaetales + 0.00 40 0 F 137 Spirochaetaceae + 0.00 39 0 G 157 Treponema + 0.00 38 0 S 409322 Treponema pedis + 0.00 38 38 S1 1291379 Treponema pedis str. T A4 + 0.00 1 1 S 221027 Treponema putidum + 0.00 1 0 G 399320 Sphaerochaeta + 0.00 1 0 S 1131703 Sphaerochaeta globosa + 0.00 1 1 S1 158189 Sphaerochaeta globosa str. Buddy + 0.00 9 0 F 1643685 Borreliaceae + 0.00 9 0 G 138 Borrelia + 0.00 8 8 S 140 Borrelia hermsii + 0.00 1 0 S 229155 Borrelia turcica + 0.00 1 1 S1 1104446 Borrelia turcica IST7 + 0.00 34 0 O 1643688 Leptospirales + 0.00 34 0 F 170 Leptospiraceae + 0.00 34 0 G 171 Leptospira + 0.00 31 3 S 173 Leptospira interrogans + 0.00 28 28 S1 338215 Leptospira interrogans serovar Bratislava + 0.00 2 2 S 408139 Leptospira kmetyi + 0.00 1 0 S 172 Leptospira biflexa + 0.00 1 1 S1 145259 Leptospira biflexa serovar Patoc + 0.00 28 0 O 1643686 Brachyspirales + 0.00 28 0 F 143786 Brachyspiraceae + 0.00 28 8 G 29521 Brachyspira + 0.00 11 11 S 52584 Brachyspira pilosicoli + 0.00 6 0 S 84378 Brachyspira murdochii + 0.00 6 6 S1 526224 Brachyspira murdochii DSM 12563 + 0.00 3 0 S 84377 Brachyspira intermedia + 0.00 3 3 S1 1045858 Brachyspira intermedia PWS/A + 0.00 90 0 D1 1783257 PVC group + 0.00 61 0 P 204428 Chlamydiae + 0.00 61 0 C 204429 Chlamydiia + 0.00 38 0 O 1963360 Parachlamydiales + 0.00 38 0 F 92713 Parachlamydiaceae + 0.00 37 0 G 282132 Candidatus Protochlamydia + 0.00 37 37 S 389348 Candidatus Protochlamydia naegleriophila + 0.00 1 0 G 112987 Neochlamydia + 0.00 1 1 S 1353976 Neochlamydia sp. S13 + 0.00 23 0 O 51291 Chlamydiales + 0.00 23 0 F 809 Chlamydiaceae + 0.00 23 0 F1 1113537 Chlamydia/Chlamydophila group + 0.00 23 0 G 810 Chlamydia + 0.00 23 23 S 83558 Chlamydia pneumoniae + 0.00 13 0 P 203682 Planctomycetes + 0.00 7 0 C 203683 Planctomycetia + 0.00 7 0 O 112 Planctomycetales + 0.00 4 0 F 1914233 Gemmataceae + 0.00 4 0 G 113 Gemmata + 0.00 2 2 S 114 Gemmata obscuriglobus + 0.00 2 2 S 1630693 Gemmata sp. SH-PL17 + 0.00 3 0 F 126 Planctomycetaceae + 0.00 3 0 G 1649490 Rubinisphaera + 0.00 3 0 S 119 Rubinisphaera brasiliensis + 0.00 3 3 S1 756272 Rubinisphaera brasiliensis DSM 5305 + 0.00 6 0 C 2517206 Candidatus Brocadiae + 0.00 6 0 O 1127829 Candidatus Brocadiales + 0.00 6 0 F 1127830 Candidatus Brocadiaceae + 0.00 6 0 G 380738 Candidatus Kuenenia + 0.00 6 6 S 174633 Candidatus Kuenenia stuttgartiensis + 0.00 9 0 P 134625 Kiritimatiellaeota + 0.00 9 0 C 1921781 Kiritimatiellae + 0.00 9 0 O 1921782 Kiritimatiellales + 0.00 9 0 F 1921783 Kiritimatiellaceae + 0.00 9 0 G 1921784 Kiritimatiella + 0.00 9 9 S 1307763 Kiritimatiella glycovorans + 0.00 7 0 P 74201 Verrucomicrobia + 0.00 3 0 C 1955630 Methylacidiphilae + 0.00 3 0 O 717963 Methylacidiphilales + 0.00 3 0 F 717964 Methylacidiphilaceae + 0.00 3 0 G 511745 Methylacidiphilum + 0.00 3 0 S 591154 Methylacidiphilum fumariolicum + 0.00 3 3 S1 1156937 Methylacidiphilum fumariolicum SolV + 0.00 2 0 P1 326457 unclassified Verrucomicrobia + 0.00 2 0 P2 417295 unclassified Verrucomicrobia (miscellaneous) + 0.00 2 2 S 1637999 Verrucomicrobia bacterium IMCC26134 + 0.00 1 0 C 134549 Spartobacteria + 0.00 1 0 G 134550 Candidatus Xiphinematobacter + 0.00 1 1 S 1704307 Candidatus Xiphinematobacter sp. Idaho Grape + 0.00 1 0 C 203494 Verrucomicrobiae + 0.00 1 0 O 48461 Verrucomicrobiales + 0.00 1 0 F 1647988 Akkermansiaceae + 0.00 1 0 G 239934 Akkermansia + 0.00 1 1 S 239935 Akkermansia muciniphila + 0.00 38 0 D1 2323 unclassified Bacteria + 0.00 38 0 D2 1783234 Bacteria candidate phyla + 0.00 21 0 D3 95901 Candidatus Dependentiae + 0.00 21 0 C 2497643 Candidatus Babeliae + 0.00 21 0 O 2497644 Candidatus Babeliales + 0.00 21 0 F 2497645 Candidatus Babeliaceae + 0.00 21 0 G 1551504 Candidatus Babela + 0.00 21 21 S 673862 Candidatus Babela massiliensis + 0.00 17 0 P 95818 Candidatus Saccharibacteria + 0.00 16 0 P1 1895827 unclassified Saccharibacteria + 0.00 16 16 S 2056494 Candidatus Saccharibacteria bacterium YM_S32_TM7_50_20 + 0.00 1 1 S 2572088 TM7 phylum sp. oral taxon 957 + 0.00 36 0 P 200783 Aquificae + 0.00 36 0 C 187857 Aquificae + 0.00 36 0 O 32069 Aquificales + 0.00 35 0 O1 90150 Aquificales genera incertae sedis + 0.00 35 0 G 412592 Thermosulfidibacter + 0.00 35 0 S 412593 Thermosulfidibacter takaii + 0.00 35 35 S1 1298851 Thermosulfidibacter takaii ABI70S6 + 0.00 1 0 F 64898 Aquificaceae + 0.00 1 0 G 939 Hydrogenobacter + 0.00 1 0 S 940 Hydrogenobacter thermophilus + 0.00 1 1 S1 608538 Hydrogenobacter thermophilus TK-6 + 0.00 23 0 P 200918 Thermotogae + 0.00 23 0 C 188708 Thermotogae + 0.00 23 0 O 2419 Thermotogales + 0.00 23 0 F 1643950 Fervidobacteriaceae + 0.00 23 0 G 2422 Fervidobacterium + 0.00 23 0 S 2424 Fervidobacterium nodosum + 0.00 23 23 S1 381764 Fervidobacterium nodosum Rt17-B1 + 0.00 10 0 P 200930 Deferribacteres + 0.00 10 0 C 68337 Deferribacteres + 0.00 10 0 O 191393 Deferribacterales + 0.00 10 0 F 191394 Deferribacteraceae + 0.00 7 0 G 117999 Denitrovibrio + 0.00 7 0 S 118000 Denitrovibrio acetiphilus + 0.00 7 7 S1 522772 Denitrovibrio acetiphilus DSM 12809 + 0.00 3 0 G 2351 Flexistipes + 0.00 3 0 S 2352 Flexistipes sinusarabici + 0.00 3 3 S1 717231 Flexistipes sinusarabici DSM 4947 + 0.00 9 0 P 68297 Dictyoglomi + 0.00 9 0 C 203486 Dictyoglomia + 0.00 9 0 O 203487 Dictyoglomales + 0.00 9 0 F 203488 Dictyoglomaceae + 0.00 9 0 G 13 Dictyoglomus + 0.00 9 0 S 513050 Dictyoglomus turgidum + 0.00 9 9 S1 515635 Dictyoglomus turgidum DSM 6724 + 0.00 5 0 P 57723 Acidobacteria + 0.00 5 0 C 204432 Acidobacteriia + 0.00 5 0 O 204433 Acidobacteriales + 0.00 5 0 F 204434 Acidobacteriaceae + 0.00 2 0 G 33973 Acidobacterium + 0.00 2 0 S 33075 Acidobacterium capsulatum + 0.00 2 2 S1 240015 Acidobacterium capsulatum ATCC 51196 + 0.00 1 0 F1 112074 unclassified Acidobacteriaceae + 0.00 1 1 S 2211140 Acidobacteriaceae bacterium SBC82 + 0.00 1 0 G 392733 Terriglobus + 0.00 1 0 S 392734 Terriglobus roseus + 0.00 1 1 S1 926566 Terriglobus roseus DSM 18391 + 0.00 1 0 G 940557 Granulicella + 0.00 1 0 S 940614 Granulicella mallensis + 0.00 1 1 S1 682795 Granulicella mallensis MP5ACTX8 + 0.00 4 0 P 508458 Synergistetes + 0.00 4 0 C 649775 Synergistia + 0.00 4 0 O 649776 Synergistales + 0.00 4 0 F 649777 Synergistaceae + 0.00 3 0 G 49894 Acetomicrobium + 0.00 3 0 S 97477 Acetomicrobium mobile + 0.00 3 3 S1 891968 Acetomicrobium mobile DSM 13181 + 0.00 1 0 G 81461 Thermanaerovibrio + 0.00 1 0 S 108007 Thermanaerovibrio velox + 0.00 1 1 S1 926567 Thermanaerovibrio velox DSM 12556 + 0.00 2 0 P 40117 Nitrospirae + 0.00 2 0 C 203693 Nitrospira + 0.00 2 0 O 189778 Nitrospirales + 0.00 2 0 F 189779 Nitrospiraceae + 0.00 2 0 G 1234 Nitrospira + 0.00 2 2 S 330214 Nitrospira defluvii + 0.00 1 0 P 200938 Chrysiogenetes + 0.00 1 0 C 118001 Chrysiogenetes + 0.00 1 0 O 189769 Chrysiogenales + 0.00 1 0 F 189770 Chrysiogenaceae + 0.00 1 0 G 393029 Desulfurispirillum + 0.00 1 0 S 936456 Desulfurispirillum indicum + 0.00 1 1 S1 653733 Desulfurispirillum indicum S5 + 0.00 1 0 P 1930617 Calditrichaeota + 0.00 1 0 C 1962850 Calditrichae + 0.00 1 0 O 1962852 Calditrichales + 0.00 1 0 F 1962854 Calditrichaceae + 0.00 1 0 G 187144 Caldithrix + 0.00 1 0 S 187145 Caldithrix abyssi + 0.00 1 1 S1 880073 Caldithrix abyssi DSM 13497 + 0.00 1 0 P 200940 Thermodesulfobacteria + 0.00 1 0 C 67799 Thermodesulfobacteria + 0.00 1 0 O 188710 Thermodesulfobacteriales + 0.00 1 0 F 188711 Thermodesulfobacteriaceae + 0.00 1 0 G 1740 Thermodesulfobacterium + 0.00 1 0 S 1295609 Thermodesulfobacterium geofontis + 0.00 1 1 S1 795359 Thermodesulfobacterium geofontis OPF15 + 0.00 1 1 P 74152 Elusimicrobia + 0.04 1082 0 D 2759 Eukaryota + 0.04 1082 0 D1 33154 Opisthokonta + 0.04 1082 0 K 33208 Metazoa + 0.04 1082 0 K1 6072 Eumetazoa + 0.04 1082 0 K2 33213 Bilateria + 0.04 1082 0 K3 33511 Deuterostomia + 0.04 1082 0 P 7711 Chordata + 0.04 1082 0 P1 89593 Craniata + 0.04 1082 0 P2 7742 Vertebrata + 0.04 1082 0 P3 7776 Gnathostomata + 0.04 1082 0 P4 117570 Teleostomi + 0.04 1082 0 P5 117571 Euteleostomi + 0.04 1082 0 P6 8287 Sarcopterygii + 0.04 1082 0 P7 1338369 Dipnotetrapodomorpha + 0.04 1082 0 P8 32523 Tetrapoda + 0.04 1082 0 P9 32524 Amniota + 0.04 1082 0 C 40674 Mammalia + 0.04 1082 0 C1 32525 Theria + 0.04 1082 0 C2 9347 Eutheria + 0.04 1082 0 C3 1437010 Boreoeutheria + 0.04 1082 0 C4 314146 Euarchontoglires + 0.04 1082 0 O 9443 Primates + 0.04 1082 0 O1 376913 Haplorrhini + 0.04 1082 0 O2 314293 Simiiformes + 0.04 1082 0 O3 9526 Catarrhini + 0.04 1082 0 O4 314295 Hominoidea + 0.04 1082 0 F 9604 Hominidae + 0.04 1082 0 F1 207598 Homininae + 0.04 1082 0 G 9605 Homo + 0.04 1082 1082 S 9606 Homo sapiens + 0.01 127 0 D 2157 Archaea + 0.00 108 0 P 28890 Euryarchaeota + 0.00 72 0 P1 2290931 Stenosarchaea group + 0.00 40 0 C 183963 Halobacteria + 0.00 32 0 O 1644055 Haloferacales + 0.00 29 0 F 1963271 Halorubraceae + 0.00 29 0 G 1644057 Salinigranum + 0.00 29 29 S 755307 Salinigranum rubrum + 0.00 3 0 F 1644056 Haloferacaceae + 0.00 3 0 G 293431 Haloquadratum + 0.00 3 0 S 293091 Haloquadratum walsbyi + 0.00 3 3 S1 768065 Haloquadratum walsbyi C23 + 0.00 5 0 O 1644060 Natrialbales + 0.00 5 0 F 1644061 Natrialbaceae + 0.00 5 0 G 88723 Natrinema + 0.00 5 5 S 406552 Natrinema sp. J7-2 + 0.00 3 0 O 2235 Halobacteriales + 0.00 3 0 F 2236 Halobacteriaceae + 0.00 3 0 G 2239 Halobacterium + 0.00 2 2 S 1407499 Halobacterium hubeiense + 0.00 1 1 S 2242 Halobacterium salinarum + 0.00 32 0 C 224756 Methanomicrobia + 0.00 32 0 O 94695 Methanosarcinales + 0.00 32 0 F 2206 Methanosarcinaceae + 0.00 31 12 G 2207 Methanosarcina + 0.00 15 15 S 2208 Methanosarcina barkeri + 0.00 4 4 S 1434100 Methanosarcina sp. MTP4 + 0.00 1 0 G 196136 Methanosalsum + 0.00 1 0 S 39669 Methanosalsum zhilinae + 0.00 1 1 S1 679901 Methanosalsum zhilinae DSM 4017 + 0.00 33 0 P1 2283794 Methanomada group + 0.00 33 0 C 183939 Methanococci + 0.00 33 0 O 2182 Methanococcales + 0.00 33 0 F 196117 Methanocaldococcaceae + 0.00 33 0 G 196118 Methanocaldococcus + 0.00 32 0 S 67760 Methanocaldococcus infernus + 0.00 32 32 S1 573063 Methanocaldococcus infernus ME + 0.00 1 1 S 1301915 Methanocaldococcus bathoardescens + 0.00 3 0 P1 2283796 Diaforarchaea group + 0.00 3 0 C 183967 Thermoplasmata + 0.00 3 0 O 2301 Thermoplasmatales + 0.00 3 0 F 46630 Picrophilaceae + 0.00 3 0 G 46631 Picrophilus + 0.00 3 0 S 82076 Picrophilus torridus + 0.00 3 3 S1 263820 Picrophilus torridus DSM 9790 + 0.00 19 0 D1 1783275 TACK group + 0.00 11 0 P 28889 Crenarchaeota + 0.00 11 0 C 183924 Thermoprotei + 0.00 6 0 O 871006 Acidilobales + 0.00 6 0 F 255472 Caldisphaeraceae + 0.00 6 0 G 200414 Caldisphaera + 0.00 6 0 S 200415 Caldisphaera lagunensis + 0.00 6 6 S1 1056495 Caldisphaera lagunensis DSM 15908 + 0.00 5 0 O 2266 Thermoproteales + 0.00 5 0 F 2267 Thermoproteaceae + 0.00 5 0 G 164450 Vulcanisaeta + 0.00 5 0 S 985052 Vulcanisaeta moutnovskia + 0.00 5 5 S1 985053 Vulcanisaeta moutnovskia 768-28 + 0.00 8 0 P 651137 Thaumarchaeota + 0.00 7 0 P1 651142 unclassified Thaumarchaeota + 0.00 7 0 G 1825023 Candidatus Nitrosotenuis + 0.00 7 7 S 1603555 Candidatus Nitrosotenuis cloacae + 0.00 1 0 C 1643678 Nitrososphaeria + 0.00 1 0 O 1968909 Candidatus Nitrosocaldales + 0.00 1 0 F 1968910 Candidatus Nitrosocaldaceae + 0.00 1 0 G 498374 Candidatus Nitrosocaldus + 0.00 1 1 S 2045011 Candidatus Nitrosocaldus islandicus + 0.06 1385 1385 R1 28384 other sequences + 0.04 978 0 D 10239 Viruses + 0.03 840 0 O 28883 Caudovirales + 0.03 824 0 F 10699 Siphoviridae + 0.03 747 0 F1 196894 unclassified Siphoviridae + 0.03 747 747 S 1071177 Psychrobacter phage Psymv2 + 0.00 77 0 G 1623274 Biseptimavirus + 0.00 77 0 G1 1955180 unclassified Biseptimavirus + 0.00 77 77 S 1403390 Staphylococcus phage phiRS7 + 0.00 16 0 F 10662 Myoviridae + 0.00 16 0 F1 196896 unclassified Myoviridae + 0.00 14 14 S 754048 Psychrobacter phage pOW20-A + 0.00 2 2 S 1493511 Synechococcus phage ACG-2014f + 0.00 81 0 F 10240 Poxviridae + 0.00 81 0 F1 10241 Chordopoxvirinae + 0.00 81 0 G 2005509 Centapoxvirus + 0.00 81 81 S 1076255 Yokapox virus + 0.00 22 0 F 10486 Iridoviridae + 0.00 22 0 F1 2017756 Alphairidovirinae + 0.00 22 0 G 10494 Lymphocystivirus + 0.00 22 0 G1 345690 unclassified Lymphocystivirus + 0.00 22 22 S 1898060 Lymphocystis disease virus Sa + 0.00 16 0 F 10442 Baculoviridae + 0.00 16 0 G 558016 Alphabaculovirus + 0.00 16 16 S 10454 Spodoptera exigua multiple nucleopolyhedrovirus + 0.00 15 0 F 549779 Mimiviridae + 0.00 15 15 G 315393 Mimivirus + 0.00 2 0 F 1511852 Nudiviridae + 0.00 2 0 G 1511854 Betanudivirus + 0.00 2 0 S 29250 Heliothis zea nudivirus + 0.00 2 2 S1 1128424 Helicoverpa zea nudivirus 2 + 0.00 1 0 O 548681 Herpesvirales + 0.00 1 0 F 10292 Herpesviridae + 0.00 1 0 F1 10357 Betaherpesvirinae + 0.00 1 0 G 10358 Cytomegalovirus + 0.00 1 1 S 50290 Aotine betaherpesvirus 1 + 0.00 1 0 F 10501 Phycodnaviridae + 0.00 1 0 F1 455363 unclassified Phycodnaviridae + 0.00 1 1 S 2023057 Orpheovirus IHUMI-LCC2