# HG changeset patch # User yhoogstrate # Date 1391767438 18000 # Node ID e1540deaef52510d9340dc91b9184572b0b3c3e2 # Parent ea9a28803468bdb5dfd69ee4b135d570757e91b3 Uploaded diff -r ea9a28803468 -r e1540deaef52 varscan2_snp_from_bam.xml --- a/varscan2_snp_from_bam.xml Fri Feb 07 04:14:06 2014 -0500 +++ b/varscan2_snp_from_bam.xml Fri Feb 07 05:03:58 2014 -0500 @@ -1,6 +1,6 @@ - VarScan2 SNP/SNV detection (1: directly reading *.bam file(s), 2: using parallel mpileup generation, to avoid unncessairy I/O overhead and increase performance. + VarScan2 SNP/SNV detection; directly reading *.bam file(s) & using parallel mpileup generation, to avoid unncessairy I/O overhead and increase performance. samtools-mpileup-parallel VarScan