Mercurial > repos > yhoogstrate > varscan_mpileup2snp_from_bam

diff samtools-parallel-mpileup.xml @ 66:ef13be78c5fc draft

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author yhoogstrate
date Tue, 20 May 2014 09:06:50 -0400
parents 3296b5c8a968
children bc398d6bac85
line wrap: on
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--- a/samtools-parallel-mpileup.xml	Wed Mar 05 11:08:26 2014 -0500
+++ b/samtools-parallel-mpileup.xml	Tue May 20 09:06:50 2014 -0400
@@ -3,7 +3,8 @@
 	<description>Samtools mpileup (supporting parallelization)</description>
 	<requirements>
 		<requirement type="package" version="0.1.19">samtools-parallel-mpileup</requirement>
-		<requirement type="package" version="0.1.19">samtools</requirement>
+		<!-- <requirement type="package" version="0.1.19">samtools</requirement> -->
+		<requirement type="package" version="0.1.19">package_samtools_0_1_19</requirement>
 	</requirements>
 	<command>
 		#if $reference_genome_source.source_select == "attribute" and len({ alignment.metadata.dbkey:True for alignment in $alignments }.keys()) != 1