comparison samtools-parallel-mpileup.xml @ 48:e3eb1ca50b8d draft

Uploaded

47:4ae3d1a2acf7

			<when value="true">
				<param type="integer" name="samtools_threads" value="2" min="1" label="Samtools: mpileup threads" />
			</when>
		</conditional>
		
		<param name="sort_mpileup" type="select" display="checkboxes" multiple="false" checked="false" truevalue="true" falsevalue="false" label="Sort mpileup file" help="Because parallelization may disrupt the outputs order, sorting can be conveniet for e.g. testing. Notice that this function has only use in a limited number of situations but costs CPU usage. Only use it if its really neccesairy." />
		
		<conditional name="extended_parameters">
			<param name="parameters" type="select" label="Advanced parameters" help="For more advanced VarScan and samtools settings.">
				<option value="default">Default settings</option>
				<option value="extended">Extended settings</option>

48:e3eb1ca50b8d

			<when value="true">
				<param type="integer" name="samtools_threads" value="2" min="1" label="Samtools: mpileup threads" />
			</when>
		</conditional>
		
		<param name="sort_mpileup" type="boolean" truevalue="true" falsevalue="false" label="Sort mpileup file" help="Because parallelization may disrupt the outputs order, sorting can be conveniet for e.g. testing. Notice that this function has only use in a limited number of situations but costs CPU usage. Only use it if its really neccesairy." />
		
		<conditional name="extended_parameters">
			<param name="parameters" type="select" label="Advanced parameters" help="For more advanced VarScan and samtools settings.">
				<option value="default">Default settings</option>
				<option value="extended">Extended settings</option>