# HG changeset patch
# User yhoogstrate
# Date 1462529316 14400
# Node ID c690aa928d3daa9c4d7d267d125542493e0f1ac9
# Parent  487f438da0990b70aa85ff4404e723941366064e
planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/segmentation_fold_galaxy_wrapper commit 879dad538d7c2fa8b7e7f3e9460ff88874797d2c-dirty

diff -r 487f438da099 -r c690aa928d3d utils_add-read-counts.xml
--- a/utils_add-read-counts.xml	Fri May 06 05:45:36 2016 -0400
+++ b/utils_add-read-counts.xml	Fri May 06 06:08:36 2016 -0400
@@ -26,7 +26,7 @@
     <inputs>
         <param name="dbn_input_file"
                type="data"
-               format="dbn,txt"
+               format="dbn,txt,text"
                label="Input DBN file"
                help="The 'fasta'-headers should contain the genomic position being used to find overlapping reads in the BAM file"/>
         <param name="bam_input_file"
diff -r 487f438da099 -r c690aa928d3d utils_estimate-energy.xml
--- a/utils_estimate-energy.xml	Fri May 06 05:45:36 2016 -0400
+++ b/utils_estimate-energy.xml	Fri May 06 06:08:36 2016 -0400
@@ -1,4 +1,4 @@
-<tool id="smf_utils_estimate-energy" name="scan-for-segments" version="@VERSION@-1">
+<tool id="smf_utils_estimate-energy" name="estimate-energy" version="@VERSION@-1">
     <description>Estimates whether a certain Segment(Loop) is present and for which delta-G this transistion takes place</description>
     
     <macros>
@@ -80,7 +80,7 @@
     </inputs>
 
     <outputs>
-        <data format="text" name="output_list" label="${tool.name}" />
+        <data format="dbn" name="output_list" label="${tool.name}" />
     </outputs>
 
     <tests>