Mercurial > repos > yhoogstrate > segmentation_fold
view test-data/SNORD48-revised.scan-for-segments.txt @ 4:21e619c46cb5 draft
planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/segmentation_fold_galaxy_wrapper commit 61ba605ef9eb63914a248fe389860daa2249af69
| author | yhoogstrate |
|---|---|
| date | Wed, 02 Mar 2016 05:47:07 -0500 |
| parents | 59ab674be4b5 |
| children | 487f438da099 |
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>SNORD48 x Kt-42.dra GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC >SNORD48 x Kt-42.eco GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC >SNORD48 x Loop-E-Motif.bac GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC >SNORD48 x Kt-CD-box.UAU GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC >SNORD48 x Kt-CD-box.UGU GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC >SNORD48 x Kt-CD-box.CAU GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC >SNORD48 x Kt-42.tth GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC >SNORD48 x Kt-G2nA-SAM-riboswitch (T. tengcongensi) GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC >SNORD48 x Kt-7 G2nA SAM riboswitch (H. marismortui) GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC >SNORD48 x Kt-15.hma GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC >SNORD48 x Kt-U4b.hsa GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC >SNORD48 x Kt-CD-box.GGU GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC >SNORD48 x Kt-7 (E. coli) GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC >SNORD48 x Kt-7 (D. radiodurans) GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC >SNORD48 x Kt-58.hma GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC >SNORD48 x Kt-46.tth GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC >SNORD48 x Kt-SAM-ribo.tte GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC >SNORD48 x Kt-23.eco GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC >SNORD48 x Kt-38.hma GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC >SNORD48 x Kt-46.dra GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC >SNORD48 x Kt-CD-box.CGU GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC >SNORD48 x Kt-T-box.bsu GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC >SNORD48 x Kt-23.tth GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC >SNORD48 x Kt-46.eco GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC >SNORD48 x Kt-c-di-GMP-II.cac GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC >SNORD48 x Kt-11 (T. thermophilus) GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC >SNORD48 x Kt-CD-box.AAU GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC >SNORD48 x Kt-L30e.sce GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC >SNORD48 x Kt-7 (T. thermophilus) GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC >SNORD48 x Kt-42.hma GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC >SNORD48 x Kt-U4a.hsa GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC >SNORD48 x Kt-G2nA-SAMribo.bsu GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC >SNORD48 x Kt-CD-box.GAU GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC ((((((.((.((((((((((.....)))).).).)))).((((...))))...)).)))))).... (((((...(((((((...))).....))))).....(((((............))))))))).... -10.9206504822 >SNORD48 x Kt-11.eco GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC >SNORD48 x Kt-46.hma GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC >SNORD48 x Kt-CD-box.AGU GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC ((((((.((.((((((((((.....)))).).).)))).((((...))))...)).)))))).... ((...(((((..((..((((.....)))).))((((.((((((...))))..)).))))))))))) -1.84962844849