diff utils_estimate-energy.xml @ 19:3fbde4864e00 draft

planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/segmentation_fold_galaxy_wrapper commit 3814f709ce964e99fe3cf2f979c11f8f3b87bce3-dirty

--- a/utils_estimate-energy.xml	Sun May 22 13:20:01 2016 -0400
+++ b/utils_estimate-energy.xml	Tue May 24 03:27:43 2016 -0400
@@ -1,4 +1,4 @@
-<tool id="smf_utils_estimate-energy" name="estimate-energy" version="@VERSION@-1">
+<tool id="smf_utils_estimate-energy" name="estimate-energy" version="@VERSION@-2">
     <description>Estimates whether a certain Segment(Loop) is present and for which delta-G this transistion takes place</description>
     
     <macros>
@@ -9,6 +9,7 @@
         <requirement type="package" version="2.7.10">python</requirement>
         <requirement type="package" version="1.9">numpy</requirement>
         <requirement type="package" version="0.8.2.1">pysam</requirement>
+        <requirement type="package" version="0.6.1">htseq</requirement>
         <requirement type="package" version="2.0.0">segmentation-fold-utils</requirement>
 
         <requirement type="package" version="1.6.5">segmentation-fold</requirement>
@@ -71,7 +72,7 @@
                value="0"
                min="0"
                argument="--randomize"
-               label="Shuffle each sequence this many times and predict energy of shuffled sequence(s) (default: 0, 0 means disabled)" />
+               label="Shuffle each sequence this many times and predict energy of shuffled sequence(s)·(default:·0,·0·means·disabled)" />
         
         <param name="sequences_from_fasta_file"
                type="data"