comparison utils_estimate-energy.xml @ 12:c690aa928d3d draft

planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/segmentation_fold_galaxy_wrapper commit 879dad538d7c2fa8b7e7f3e9460ff88874797d2c-dirty

11:487f438da099

<tool id="smf_utils_estimate-energy" name="scan-for-segments" version="@VERSION@-1">
    <description>Estimates whether a certain Segment(Loop) is present and for which delta-G this transistion takes place</description>
    
    <macros>
        <import>macros.xml</import>
    </macros>

               label="Optional sequences to scan for Segment(Loop)s (FASTA)"
               help="Use sequences from a FASTA file instead of the XML file that contains the segments. In XML files you can explicitly link one Segment(Loop) to one particular sequence instead of doing n*n comparisons (default: None)" />
    </inputs>

    <outputs>
        <data format="text" name="output_list" label="${tool.name}" />
    </outputs>

    <tests>
        <!-- xml * fasta mode -->
        <test>

12:c690aa928d3d

<tool id="smf_utils_estimate-energy" name="estimate-energy" version="@VERSION@-1">
    <description>Estimates whether a certain Segment(Loop) is present and for which delta-G this transistion takes place</description>
    
    <macros>
        <import>macros.xml</import>
    </macros>

               label="Optional sequences to scan for Segment(Loop)s (FASTA)"
               help="Use sequences from a FASTA file instead of the XML file that contains the segments. In XML files you can explicitly link one Segment(Loop) to one particular sequence instead of doing n*n comparisons (default: None)" />
    </inputs>

    <outputs>
        <data format="dbn" name="output_list" label="${tool.name}" />
    </outputs>

    <tests>
        <!-- xml * fasta mode -->
        <test>