Mercurial > repos > yhoogstrate > segmentation_fold
comparison utils_add-read-counts.xml @ 19:3fbde4864e00 draft
planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/segmentation_fold_galaxy_wrapper commit 3814f709ce964e99fe3cf2f979c11f8f3b87bce3-dirty
| author | yhoogstrate |
|---|---|
| date | Tue, 24 May 2016 03:27:43 -0400 |
| parents | 7e5b96d45f8d |
| children | 1c6654ab2492 |
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| 18:b7c313dbaa4b | 19:3fbde4864e00 |
|---|---|
| 1 <tool id="smf_utils_add-read-counts" name="add-read-counts" version="@VERSION@-0"> | 1 <tool id="smf_utils_add-read-counts" name="add-read-counts" version="@VERSION@-3"> |
| 2 <description>Annotate sequences by adding the read counts from a bam file, within a region contained in the fasta header of the dbn file</description> | 2 <description>Annotate sequences by adding the read counts from a bam file, within a region contained in the fasta header of the dbn file</description> |
| 3 | 3 |
| 4 <macros> | 4 <macros> |
| 5 <import>macros.xml</import> | 5 <import>macros.xml</import> |
| 6 </macros> | 6 </macros> |
| 7 | 7 |
| 8 <requirements> | 8 <requirements> |
| 9 <requirement type="package" version="2.7.10">python</requirement> | 9 <requirement type="package" version="2.7.10">python</requirement> |
| 10 <requirement type="package" version="1.9">numpy</requirement> | 10 <requirement type="package" version="1.9">numpy</requirement> |
| 11 <requirement type="package" version="0.8.2.1">pysam</requirement> | 11 <requirement type="package" version="0.8.2.1">pysam</requirement> |
| 12 <requirement type="package" version="0.6.1">htseq</requirement> | |
| 12 <requirement type="package" version="2.0.0">segmentation-fold-utils</requirement> | 13 <requirement type="package" version="2.0.0">segmentation-fold-utils</requirement> |
| 13 </requirements> | 14 </requirements> |
| 14 <expand macro="stdio" /> | 15 <expand macro="stdio" /> |
| 15 | 16 |
| 16 <version_command>@VERSION_COMMAND_UTILS@</version_command> | 17 <version_command>@VERSION_COMMAND_UTILS@</version_command> |