Mercurial > repos > yhoogstrate > package_segmentation_fold_1_6_2

comparison tool_dependencies.xml @ 5:533fa0d89db0 draft default tip

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planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/segmentation_fold_galaxy_wrapper commit 3d4c8888c2257e2c01255ea4141fe96bcf6960df-dirty
author yhoogstrate
date Wed, 02 Mar 2016 10:43:03 -0500
parents 1731dc91e24f
children
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4:1731dc91e24f 5:533fa0d89db0
45 <action type="make_directory">$INSTALL_DIR/lib/python</action> 45 <action type="make_directory">$INSTALL_DIR/lib/python</action>
46 <action type="make_directory">$INSTALL_DIR/lib64/python</action> 46 <action type="make_directory">$INSTALL_DIR/lib64/python</action>
47 <action type="shell_command"> 47 <action type="shell_command">
48 export PYTHONPATH="$PYTHONPATH:$INSTALL_DIR/lib/python:$INSTALL_DIR/lib64/python" &amp;&amp; 48 export PYTHONPATH="$PYTHONPATH:$INSTALL_DIR/lib/python:$INSTALL_DIR/lib64/python" &amp;&amp;
49 cd scripts/energy-estimation-utility &amp;&amp; 49 cd scripts/energy-estimation-utility &amp;&amp;
50 python setup.py --home "$INSTALL_DIR" --install-scripts "$INSTALL_DIR/bin" 50 python setup.py install --home "$INSTALL_DIR" --install-scripts "$INSTALL_DIR/bin"
51 </action> 51 </action>
52 52
53 <action type="set_environment"> 53 <action type="set_environment">
54 <environment_variable action="append_to" name="PYTHONPATH">$INSTALL_DIR/lib/python:$INSTALL_DIR/lib64/python</environment_variable> 54 <environment_variable action="append_to" name="PYTHONPATH">$INSTALL_DIR/lib/python:$INSTALL_DIR/lib64/python</environment_variable>
55 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable> 55 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>