Mercurial > repos > yhoogstrate > package_crossmap_0_2
diff tool_dependencies.xml @ 21:ff58cb74118d draft
planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/crossmap_galaxy_wrapper commit 290b453ad2abdb65322ec2e50889aaf2b03bb095-dirty
| author | yhoogstrate |
|---|---|
| date | Fri, 28 Aug 2015 09:15:00 -0400 |
| parents | c0b7bf565723 |
| children | b38e4886f937 |
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--- a/tool_dependencies.xml Fri Aug 28 09:08:31 2015 -0400 +++ b/tool_dependencies.xml Fri Aug 28 09:15:00 2015 -0400 @@ -40,14 +40,12 @@ python setup.py install --root $INSTALL_DIR && export SUB_DIR=$(dirname $(which python)) && - echo $SUB_DIR && - mv $INSTALL_DIR$SUB_DIR $INSTALL_DIR/bin && - mv $INSTALL_DIR$SUB_DIR/../lib $INSTALL_DIR/lib + mv $INSTALL_DIR$SUB_DIR/../lib $INSTALL_DIR/lib && + mv $INSTALL_DIR$SUB_DIR $INSTALL_DIR/bin </action> <action type="set_environment"> - <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR</environment_variable> - <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR"/lib/python"</environment_variable> + <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR"/lib/python2.7/site-packages"</environment_variable> <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable> <environment_variable action="set_to" name="PATH_CROSSMAP">$INSTALL_DIR/bin</environment_variable>