annotate tool_dependencies.xml @ 3:fb38d1ff2437 draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_berkeley_1_86 commit 01677c8ad812f99fb0c60c828a22d6223f85ce6d-dirty
author yhoogstrate
date Tue, 22 Dec 2015 07:09:53 -0500
parents 360c7f09a826
children
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407bd86a6bf6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_berkeley_1_86 commit b156f10967b3984c4da7cb3fbd9b446816736007-dirty
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1 <?xml version="1.0"?>
407bd86a6bf6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_berkeley_1_86 commit b156f10967b3984c4da7cb3fbd9b446816736007-dirty
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2 <tool_dependency>
407bd86a6bf6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_berkeley_1_86 commit b156f10967b3984c4da7cb3fbd9b446816736007-dirty
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3 <package name="berkeley_db" version="1.86">
407bd86a6bf6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_berkeley_1_86 commit b156f10967b3984c4da7cb3fbd9b446816736007-dirty
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4 <install version="1.0">
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76899bf290a6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_berkeley_1_86 commit b156f10967b3984c4da7cb3fbd9b446816736007-dirty
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5 <actions>
76899bf290a6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_berkeley_1_86 commit b156f10967b3984c4da7cb3fbd9b446816736007-dirty
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6 <action type="download_by_url"
76899bf290a6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_berkeley_1_86 commit b156f10967b3984c4da7cb3fbd9b446816736007-dirty
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7 sha256sum="1edefd96989f652c8b8ba5a9080ec27ef182e4b5fc0830c5144bb96e0eb15ab8">http://download.oracle.com/berkeley-db/db.1.86.tar.gz</action>
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fb38d1ff2437 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_berkeley_1_86 commit 01677c8ad812f99fb0c60c828a22d6223f85ce6d-dirty
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8 <action type="shell_command"><![CDATA[
fb38d1ff2437 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_berkeley_1_86 commit 01677c8ad812f99fb0c60c828a22d6223f85ce6d-dirty
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9 chmod 644 hash/hash.c hash/hash.h hash/ndbm.c PORT/linux/Makefile &&
fb38d1ff2437 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_berkeley_1_86 commit 01677c8ad812f99fb0c60c828a22d6223f85ce6d-dirty
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fb38d1ff2437 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_berkeley_1_86 commit 01677c8ad812f99fb0c60c828a22d6223f85ce6d-dirty
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11 sed -i.bak "s@->errno@->dbm_errno@" hash/hash.c &&
fb38d1ff2437 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_berkeley_1_86 commit 01677c8ad812f99fb0c60c828a22d6223f85ce6d-dirty
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12 sed -i.bak "s@errno@dbm_errno@" hash/hash.h &&
fb38d1ff2437 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_berkeley_1_86 commit 01677c8ad812f99fb0c60c828a22d6223f85ce6d-dirty
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13 sed -i.bak "s@->errno@->dbm_errno@" hash/ndbm.c &&
fb38d1ff2437 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_berkeley_1_86 commit 01677c8ad812f99fb0c60c828a22d6223f85ce6d-dirty
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fb38d1ff2437 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_berkeley_1_86 commit 01677c8ad812f99fb0c60c828a22d6223f85ce6d-dirty
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15 sed -i.bak "s@{CC} -c -D@{CC} -fPIC -c -D@" PORT/linux/Makefile &&
fb38d1ff2437 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_berkeley_1_86 commit 01677c8ad812f99fb0c60c828a22d6223f85ce6d-dirty
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fb38d1ff2437 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_berkeley_1_86 commit 01677c8ad812f99fb0c60c828a22d6223f85ce6d-dirty
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17 cd PORT/linux &&
fb38d1ff2437 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_berkeley_1_86 commit 01677c8ad812f99fb0c60c828a22d6223f85ce6d-dirty
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18 make
fb38d1ff2437 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_berkeley_1_86 commit 01677c8ad812f99fb0c60c828a22d6223f85ce6d-dirty
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19 ]]></action>
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76899bf290a6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_berkeley_1_86 commit b156f10967b3984c4da7cb3fbd9b446816736007-dirty
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20 <action type="move_directory_files">
76899bf290a6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_berkeley_1_86 commit b156f10967b3984c4da7cb3fbd9b446816736007-dirty
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21 <source_directory>.</source_directory>
76899bf290a6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_berkeley_1_86 commit b156f10967b3984c4da7cb3fbd9b446816736007-dirty
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22 <destination_directory>$INSTALL_DIR</destination_directory>
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407bd86a6bf6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_berkeley_1_86 commit b156f10967b3984c4da7cb3fbd9b446816736007-dirty
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23 </action>
407bd86a6bf6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_berkeley_1_86 commit b156f10967b3984c4da7cb3fbd9b446816736007-dirty
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24 <action type="set_environment">
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25 <environment_variable name="BERKELEY_DB_ROOT_PATH" action="set_to">$INSTALL_DIR</environment_variable>
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27 <environment_variable action="append_to" name="LD_LIBRARY_PATH">$INSTALL_DIR/lib/</environment_variable>
407bd86a6bf6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_berkeley_1_86 commit b156f10967b3984c4da7cb3fbd9b446816736007-dirty
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28 <environment_variable action="prepend_to" name="CPLUS_INCLUDE_PATH">$INSTALL_DIR/include</environment_variable>
407bd86a6bf6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_berkeley_1_86 commit b156f10967b3984c4da7cb3fbd9b446816736007-dirty
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29 <environment_variable action="prepend_to" name="C_INCLUDE_PATH">$INSTALL_DIR/include</environment_variable>
407bd86a6bf6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_berkeley_1_86 commit b156f10967b3984c4da7cb3fbd9b446816736007-dirty
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30 </action>
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31 </actions>
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32 </install>
407bd86a6bf6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_berkeley_1_86 commit b156f10967b3984c4da7cb3fbd9b446816736007-dirty
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33 <readme />
407bd86a6bf6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_berkeley_1_86 commit b156f10967b3984c4da7cb3fbd9b446816736007-dirty
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34 </package>
407bd86a6bf6 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_berkeley_1_86 commit b156f10967b3984c4da7cb3fbd9b446816736007-dirty
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35 </tool_dependency>