diff flaimapper.xml @ 20:ac69be28e786 draft

FlaiMapper: added wrapper for FASTA->GTF conversion

--- a/flaimapper.xml	Fri Mar 20 11:14:32 2015 -0400
+++ b/flaimapper.xml	Wed Mar 25 12:37:45 2015 -0400
@@ -60,7 +60,7 @@
 - http://genome.ucsc.edu/FAQ/FAQformat.html#format3
 - http://www.ensembl.org/info/website/upload/gff.html
 
-The reference sequence should be provided in FASTSA format.
+The reference sequence should be provided in FASTA format.
 
 You can access **ncRNAdb09** at the following URLs:
 https://raw.githubusercontent.com/yhoogstrate/flaimapper/master/share/annotations/ncRNA_annotation/ncrnadb09.gtf *(mask file)*
@@ -112,19 +112,9 @@
 The tool wrapper has been written by Youri Hoogstrate from the Erasmus
 Medical Center (Rotterdam, Netherlands).
 
-References
-----------
-**FlaiMapper: computational annotation of small ncRNA-derived fragments using RNA-seq high-throughput data.**
-
-*Hoogstrat* - Bioinformatics. 2014 Apr 1;30(7):923-30.
-
-*Youri Hoogstrate, Guido Jenster, and Elena S. Martens-Uzunova* - Bioinformatics (2015) 31 (5): 665-673
-
-- http://www.ncbi.nlm.nih.gov/pubmed/25338717
-- http://dx.doi.org/10.1093/bioinformatics/btu696
 	</help>
 	
 	<citations>
 		<citation type="doi">10.1093/bioinformatics/btu696</citation>
 	</citations>
-</tool>
\ No newline at end of file
+</tool>