Mercurial > repos > yhoogstrate > featurecounts_valid_gff

changeset 58:6637aba9c1d4

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deps
author yhoogstrate <y.hoogstrate@erasmusmc.nl>
date Wed, 27 Jan 2016 15:36:56 +0100
parents f2159178d08b
children 3521ce097016
files featurecounts_valid_gff.xml tool_dependencies.xml
diffstat 2 files changed, 4 insertions(+), 0 deletions(-) [+]
line wrap: on
line diff
--- a/featurecounts_valid_gff.xml	Wed Jan 27 15:33:47 2016 +0100
+++ b/featurecounts_valid_gff.xml	Wed Jan 27 15:36:56 2016 +0100
@@ -2,6 +2,7 @@
 <tool id="featurecounts_valid_gff" name="featureCounts-valid-gff">
 	<description>Measure gene expression in RNA-Seq experiments from SAM or BAM files.</description>
 	<requirements>
+		<requirement type="package" version="0.1.19">samtools</requirement>
 		<requirement type="package" version="1.4.0.1">featurecounts_valid_gff</requirement>
 	</requirements>
 	<command>
--- a/tool_dependencies.xml	Wed Jan 27 15:33:47 2016 +0100
+++ b/tool_dependencies.xml	Wed Jan 27 15:36:56 2016 +0100
@@ -1,5 +1,8 @@
 <?xml version="1.0"?>
 <tool_dependency>
+	<package name="samtools" version="0.1.19">
+		<repository changeset_revision="632f1a03db92" name="package_samtools_0_1_19" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+	</package>
 	<package name="featurecounts_valid_gff" version="1.4.0.1">
 		<install version="1.0">
 			<actions>