Mercurial > repos > yhoogstrate > featurecounts_valid_gff

diff featurecounts_valid_gff.xml @ 40:4850787ee1d9

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Uploaded
author yhoogstrate
date Mon, 24 Feb 2014 08:19:34 -0500
parents bdd5f2ecd087
children c55c0c51b634
line wrap: on
line diff
--- a/featurecounts_valid_gff.xml	Fri Feb 21 04:23:38 2014 -0500
+++ b/featurecounts_valid_gff.xml	Mon Feb 24 08:19:34 2014 -0500
@@ -93,7 +93,7 @@
 			</param>
 			<when value="indexed_filtered">
 				<param name="reference_gene_sets" type="select" label="Reference Gene Sets used during alignment (GFF/GTF)" >
-					<options from_file="gene_sets.loc">
+					<options from_data_table="gene_sets"><!-- replaces 'from_file="gene_sets"' - more strict -->
 						<column name="name"  index="0"/>
 						<column name="dbkey" index="1"/>
 						<column name="value" index="2"/>
@@ -104,7 +104,7 @@
 			</when>
 			<when value="indexed_all">
 				<param name="reference_gene_sets" type="select" label="Reference Gene Sets used during alignment (GFF/GTF)" >
-					<options from_file="gene_sets.loc">
+					<options from_data_table="gene_sets"><!-- replaces 'from_file="gene_sets"' - more strict -->
 						<column name="name"  index="0"/>
 						<column name="dbkey" index="1"/>
 						<column name="value" index="2"/>