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author yhoogstrate
date Thu, 13 Nov 2014 11:24:32 -0500
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1 FASTQ_replace_dots_for_N wrapper for Galaxy
2 ===========================================
3
4 Some FASTQ files contain dots (ASCII char 46) instead of N to indicate
5 an unknown called base. Replacing these dots back to N often prevents
6 programs from crashing.
7
8 Development
9 -----------
10
11 * Repository-Maintainer: Youri Hoogstrate
12
13 * Repository-Development: <https://bitbucket.org/EMCbioinf/galaxy-tool-shed-tools>
14
15 The tool wrapper has been written by Youri Hoogstrate from the Erasmus
16 Medical Center (Rotterdam, Netherlands) on behalf of the Translational
17 Research IT (TraIT) project:
18
19 <http://www.ctmm.nl/en/programmas/infrastructuren/traitprojecttranslationeleresearch>
20
21 More tools by the Translational Research IT (TraIT) project can be found in the following repository:
22
23 <http://toolshed.dtls.nl/>
24
25 License
26 -------
27
28 **FASTQ_replace_dots_for_N**:
29
30 Copyright (C) 2013-2014 Youri Hoogstrate
31
32 This program is free software: you can redistribute it and/or modify
33 it under the terms of the GNU General Public License as published by
34 the Free Software Foundation, either version 3 of the License, or
35 (at your option) any later version.
36
37 This program is distributed in the hope that it will be useful,
38 but WITHOUT ANY WARRANTY; without even the implied warranty of
39 MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
40 GNU General Public License for more details.
41
42 You should have received a copy of the GNU General Public License
43 along with this program. If not, see <http://www.gnu.org/licenses/>.
44
45 **This wrapper**:
46
47 Copyright (C) 2013-2014 Youri Hoogstrate
48
49 This program is free software: you can redistribute it and/or modify
50 it under the terms of the GNU General Public License as published by
51 the Free Software Foundation, either version 3 of the License, or
52 (at your option) any later version.
53
54 This program is distributed in the hope that it will be useful,
55 but WITHOUT ANY WARRANTY; without even the implied warranty of
56 MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
57 GNU General Public License for more details.
58
59 You should have received a copy of the GNU General Public License
60 along with this program. If not, see <http://www.gnu.org/licenses/>.