Mercurial > repos > yhoogstrate > ega_download_streamer

changeset 2:15ddec7d4c11 draft

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planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/ega_client_galaxy_wrapper commit addbb78198534683454365526f6df5cdb7846bf6-dirty
author yhoogstrate
date Tue, 29 Mar 2016 05:37:19 -0400
parents 70ded06aed82
children 8613d02e64d3
files ega_download_streamer.xml
diffstat 1 files changed, 2 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/ega_download_streamer.xml	Tue Mar 29 03:53:26 2016 -0400
+++ b/ega_download_streamer.xml	Tue Mar 29 05:37:19 2016 -0400
@@ -6,10 +6,11 @@
     <stdio>
         <!-- Anything other than zero is an error -->
         <regex match="Login failed" source="both" level="fatal"/>
+        <regex match="error:" source="both" level="fatal"/>
         <exit_code range="1:" />
         <exit_code range=":-1" />
     </stdio>
-    <version_command>java -jar $EGA_DOWNLOAD_STREAMER_ROOT_DIR/jars/EgaDemoClient.jar -version | grep -i Version | grep -v -i new</version_command>
+    <version_command>java -jar $JAVA_JAR_PATH"/EgaDemoClient.jar" -version | grep -i Version | grep -v -i new</version_command>
     <command><![CDATA[
         #import random
         #import string