# HG changeset patch # User yhoogstrate # Date 1400769499 14400 # Node ID af6e8c45d1429594cadd28fadc4b1605b71fc61d # Parent 0bbf792139708f44147766b9af2ffa714e0d0707 Uploaded diff -r 0bbf79213970 -r af6e8c45d142 edgeR_Differential_Gene_Expression.xml --- a/edgeR_Differential_Gene_Expression.xml Thu May 22 10:36:11 2014 -0400 +++ b/edgeR_Differential_Gene_Expression.xml Thu May 22 10:38:19 2014 -0400 @@ -280,7 +280,7 @@ } if(output_heatmap_plot != "/dev/null") { - pdf(output_heatmap_plot,width=8.5) + pdf(output_heatmap_plot,width=10.5) etable2 <- topTags(lrt, n=100)\$table order <- rownames(etable2) cpm_sub <- cpm(dge,normalized.lib.sizes=TRUE,log=TRUE)[as.numeric(order),]