Mercurial > repos > yhoogstrate > edger_with_design_matrix
comparison tool_dependencies.xml @ 112:f1ec1b5e9fa4 draft
planemo upload for repository https://bitbucket.org/EMCbioinf/galaxy-tool-shed-tools/raw/master/edger_with_design_matrix commit 097f2974042345a231e431299a031f236f3eb689-dirty
| author | yhoogstrate |
|---|---|
| date | Tue, 01 Sep 2015 07:36:38 -0400 |
| parents | 049d8bc2214e |
| children | 7bb87a6bc4d5 |
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| 111:b9abc9d3b429 | 112:f1ec1b5e9fa4 |
|---|---|
| 5 </package> | 5 </package> |
| 6 | 6 |
| 7 <package name="design_matrix_creator" version="1.0.0"> | 7 <package name="design_matrix_creator" version="1.0.0"> |
| 8 <install version="1.0"> | 8 <install version="1.0"> |
| 9 <actions> | 9 <actions> |
| 10 <action type="shell_command">mkdir $INSTALL_DIR/bin ; cp $REPOSITORY_INSTALL_DIR/bin/design_matrix_creator $INSTALL_DIR/bin/</action> | 10 <action type="shell_command">mkdir $INSTALL_DIR/bin ; cp $REPOSITORY_INSTALL_DIR/bin/design_matrix_creator $INSTALL_DIR/bin/design_matrix_creator</action> |
| 11 <action type="chmod"> | 11 <action type="chmod"> |
| 12 <file mode="755">$INSTALL_DIR/bin/design_matrix_creator</file> | 12 <file mode="755">$INSTALL_DIR/bin/design_matrix_creator</file> |
| 13 </action> | 13 </action> |
| 14 <action type="set_environment"> | 14 <action type="set_environment"> |
| 15 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable> | 15 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable> |
| 16 <environment_variable action="prepend_to" name="PATH">$REPOSITORY_INSTALL_DIR</environment_variable> | |
| 17 </action> | 16 </action> |
| 18 </actions> | 17 </actions> |
| 19 </install> | 18 </install> |
| 20 </package> | 19 </package> |
| 21 | 20 |
| 22 <package name="edger_dge_table_to_bedgraph" version="1.0.0"> | 21 <package name="edger_dge_table_to_bedgraph" version="1.0.0"> |
| 23 <install version="1.0"> | 22 <install version="1.0"> |
| 24 <actions> | 23 <actions> |
| 25 <action type="shell_command">mkdir $INSTALL_DIR/bin ; cp $REPOSITORY_INSTALL_DIR/bin/edger_dge_table_to_bedgraph $INSTALL_DIR/bin/</action> | 24 <action type="shell_command">mkdir $INSTALL_DIR/bin ; cp $REPOSITORY_INSTALL_DIR/bin/edger_dge_table_to_bedgraph $INSTALL_DIR/bin/edger_dge_table_to_bedgraph</action> |
| 26 <action type="chmod"> | 25 <action type="chmod"> |
| 27 <file mode="755">$INSTALL_DIR/bin/edger_dge_table_to_bedgraph</file> | 26 <file mode="755">$INSTALL_DIR/bin/edger_dge_table_to_bedgraph</file> |
| 28 </action> | 27 </action> |
| 29 <action type="set_environment"> | 28 <action type="set_environment"> |
| 30 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable> | 29 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable> |
| 31 <environment_variable action="prepend_to" name="PATH">$REPOSITORY_INSTALL_DIR</environment_variable> | |
| 32 </action> | 30 </action> |
| 33 </actions> | 31 </actions> |
| 34 </install> | 32 </install> |
| 35 </package> | 33 </package> |
| 36 </tool_dependency> | 34 </tool_dependency> |