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1
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1
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2 def listfiles(unpaired_samples,paired_samples):
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3 file_list = []
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4
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5 if(unpaired_samples != None):
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6 if(type(unpaired_samples) == type([])):
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7 for sample in unpaired_samples:
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8 file_list.append([sample.name,sample.file_name,False])
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9
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10 ## The following takes care of a bug in galaxy;
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11 ## if only one history object is selected, it isn't returned as a list but as single object.
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12 ## This is probably a rudimentair part of code that originates from the time that multiple data-objects were not implemented.
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13
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14 else:
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15 file_list.append([unpaired_samples.name,unpaired_samples.file_name,False])
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16
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17 if(paired_samples != None):
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18 pair_id = 0
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19 for pair in paired_samples:
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20 pair_id += 1
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21 sample_id = 0
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22 for sample in pair['samples']:
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23 sample_id += 1
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24 file_list.append([sample['sample'].name+" *[Pair "+str(pair_id)+"; sample "+str(sample_id)+"]",sample['sample'].file_name,False])
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25
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26 return file_list
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