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view test-data/test_vcf_01_output.vcf @ 16:263581d4dd90 draft

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planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/crossmap_galaxy_wrapper commit 74570ff45544cfe08ef65d0b712f8d44da6f545c
author yhoogstrate
date Thu, 13 Aug 2015 10:19:19 -0400
parents 7e32d2a88c07
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##fileformat=VCFv4.2
##FORMAT=<ID=GT,Number=1,Type=Integer,Description="Genotype">
##FORMAT=<ID=GP,Number=G,Type=Float,Description="Genotype Probabilities">
##FORMAT=<ID=PL,Number=G,Type=Float,Description="Phred-scaled Genotype Likelihoods">
##liftOverProgram=CrossMap(https://sourceforge.net/projects/crossmap/)
##liftOverFile=test_vcf_01.over.chain
##new_reference_genome=test_vcf_01.fasta
##liftOverTime=August13,2015
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	SAMP001	SAMP002
2	227	rs11449	C	A	.	PASS	.	GT	0/0	0/1
2	137	rs84825	T	C	.	PASS	.	GT:GP	0/1:.	0/1:0.03,0.97,0
2	36	rs84823	C	G	.	PASS	.	GT:PL	./.:.	1/1:10,5,0