Mercurial > repos > yhoogstrate > crossmap
comparison crossmap.xml @ 18:d76352081273 draft
planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/crossmap_galaxy_wrapper commit 3d756e33e5a551c55cfb91fd95785ce102a8c41f-dirty
| author | yhoogstrate |
|---|---|
| date | Wed, 26 Aug 2015 11:01:29 -0400 |
| parents | 263581d4dd90 |
| children | 386e76dfcd77 |
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| 17:a2ca0062cded | 18:d76352081273 |
|---|---|
| 379 <param name="include_fails" value="True"/> | 379 <param name="include_fails" value="True"/> |
| 380 | 380 |
| 381 <output name="output" file="test_bed_02_output_a__all.bed"/> | 381 <output name="output" file="test_bed_02_output_a__all.bed"/> |
| 382 </test> | 382 </test> |
| 383 | 383 |
| 384 <!-- BigWig --><!-- Malfuncioning in CrossMap 0.2 | 384 <!-- BigWig --><!-- Malfuncioning in CrossMap 0.2, but patched via galaxy toolshed installer --> |
| 385 <test> | 385 <test> |
| 386 <param name="input_format" value="bigwig"/> | 386 <param name="input_format" value="bigwig"/> |
| 387 <param name="index_source" value="history"/> | 387 <param name="index_source" value="history"/> |
| 388 <param name="input" value="test_bigwig_01_input_a.bw" ftype="bigwig"/> | 388 <param name="input" value="test_bigwig_01_input_a.bw" ftype="bigwig"/> |
| 389 <param name="input_chain" value="aToB.over.chain" ftype="csv"/> | 389 <param name="input_chain" value="aToB.over.chain" ftype="csv"/> |
| 390 <param name="include_fails" value="False"/> | 390 <param name="include_fails" value="False"/> |
| 391 | 391 |
| 392 <output name="output" file="test_bigwig_01_output_a.bw"/> | 392 <output name="output" file="test_bigwig_01_output_a.bw"/> |
| 393 <output name="output2" file="test_bigwig_01_output_a.sorted.bgr"/> | 393 <output name="output2" file="test_bigwig_01_output_a.sorted.bgr"/> |
| 394 </test>--> | 394 </test> |
| 395 <!-- GFF --> | 395 <!-- GFF --> |
| 396 <test> | 396 <test> |
| 397 <param name="input_format" value="gff"/> | 397 <param name="input_format" value="gff"/> |
| 398 <param name="index_source" value="history"/> | 398 <param name="index_source" value="history"/> |
| 399 <param name="input" value="test_gff_01_input_a.gtf" ftype="gtf"/> | 399 <param name="input" value="test_gff_01_input_a.gtf" ftype="gtf"/> |