diff test-data/all_fasta.loc @ 35:87644259e668 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ucsc_blat/ commit f38778f3a25020809c3f6cf17aafb8dbfc54b2e8
author iuc
date Sat, 28 Sep 2024 16:29:10 +0000
parents 355af6f61974
children
line wrap: on
line diff
--- a/test-data/all_fasta.loc	Mon Nov 21 11:11:06 2022 +0000
+++ b/test-data/all_fasta.loc	Sat Sep 28 16:29:10 2024 +0000
@@ -1,30 +1,2 @@
-#This is a sample file distributed with Galaxy that enables tools
-#to use a directory of Samtools indexed sequences data files.  You will need
-#to create these data files and then create a fasta_indexes.loc file
-#similar to this one (store it in this directory) that points to
-#the directories in which those files are stored. The fasta_indexes.loc
-#file has this format (white space characters are TAB characters):
-#
-# <unique_build_id>	<dbkey>	<display_name>	<file_base_path>
-#
-#So, for example, if you had hg19 Canonical indexed stored in
-#
-# /depot/data2/galaxy/hg19/sam/,
-#
-#then the fasta_indexes.loc entry would look like this:
-#
-#hg19canon	hg19	Human (Homo sapiens): hg19 Canonical	/depot/data2/galaxy/hg19/sam/hg19canon.fa
-#
-#and your /depot/data2/galaxy/hg19/sam/ directory
-#would contain hg19canon.fa and hg19canon.fa.fai files.
-#
-#Your fasta_indexes.loc file should include an entry per line for
-#each index set you have stored.  The file in the path does actually
-#exist, but it should never be directly used. Instead, the name serves
-#as a prefix for the index file.  For example:
-#
-#hg18canon	hg18	Human (Homo sapiens): hg18 Canonical	/depot/data2/galaxy/hg18/sam/hg18canon.fa
-#hg18full	hg18	Human (Homo sapiens): hg18 Full	/depot/data2/galaxy/hg18/sam/hg18full.fa
-#hg19canon	hg19	Human (Homo sapiens): hg19 Canonical	/depot/data2/galaxy/hg19/sam/hg19canon.fa
-#hg19full	hg19	Human (Homo sapiens): hg19 Full	/depot/data2/galaxy/hg19/sam/hg19full.fa
-dbia3   dm3     Dbia3   /home/galaxy/galaxy/tool-data/dm3/seq/dbia3.fa
\ No newline at end of file
+dbia3	dbia3_dbkey	dbdia display name	${__HERE__}/dbia3/dbia3.fa
+